Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CLDND1Q9NY35 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
CLDND1Q9NY35 Y_RNA.366-201ENST00000365540 102 ntBASIC2.22□□□□□ -2.05
CLDND1Q9NY35 SNORA40.18-201ENST00000391200 128 ntBASIC2.22□□□□□ -2.05
CLDND1Q9NY35 AL627390.1-201ENST00000396055 340 ntBASIC2.22□□□□□ -2.05
CLDND1Q9NY35 SNORD23.1-201ENST00000408212 104 ntBASIC2.22□□□□□ -2.05
CLDND1Q9NY35 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDND1Q9NY35 PGBD4P5-201ENST00000445958 426 ntBASIC2.22□□□□□ -2.05
CLDND1Q9NY35 MTND5P34-201ENST00000568888 325 ntBASIC2.22□□□□□ -2.05
CLDND1Q9NY35 snoU13.31-201ENST00000607291 104 ntBASIC2.22□□□□□ -2.05
CLDND1Q9NY35 AC025166.1-201ENST00000612411 163 ntBASIC2.22□□□□□ -2.05
CLDND1Q9NY35 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
CLDND1Q9NY35 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.21□□□□□ -2.06
CLDND1Q9NY35 MIR424-201ENST00000362227 98 ntBASIC2.21□□□□□ -2.06
CLDND1Q9NY35 RNU6-349P-201ENST00000362402 107 ntBASIC2.21□□□□□ -2.06
CLDND1Q9NY35 Y_RNA.351-201ENST00000365436 96 ntBASIC2.21□□□□□ -2.06
CLDND1Q9NY35 MIR516B2-201ENST00000385190 85 ntBASIC2.21□□□□□ -2.06
CLDND1Q9NY35 RNU6-360P-201ENST00000390944 104 ntBASIC2.21□□□□□ -2.06
CLDND1Q9NY35 RNU7-80P-201ENST00000459562 61 ntBASIC2.21□□□□□ -2.06
CLDND1Q9NY35 RNU7-70P-201ENST00000516941 66 ntBASIC2.21□□□□□ -2.06
CLDND1Q9NY35 AL137847.3-201ENST00000611521 109 ntBASIC2.21□□□□□ -2.06
CLDND1Q9NY35 AL137067.1-201ENST00000615933 120 ntBASIC2.21□□□□□ -2.06
CLDND1Q9NY35 MIR6129-201ENST00000616087 109 ntBASIC2.21□□□□□ -2.06
CLDND1Q9NY35 SNORD3E-202ENST00000627253 216 ntBASIC2.21□□□□□ -2.06
CLDND1Q9NY35 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLDND1Q9NY35 MIR378A-201ENST00000362177 66 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-34-201ENST00000362441 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-12-201ENST00000362583 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-29-201ENST00000362834 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-9-201ENST00000362912 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-21-201ENST00000362963 81 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-14-201ENST00000363090 81 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-13-201ENST00000363358 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-41-201ENST00000363608 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-11-201ENST00000363616 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-5-201ENST00000363633 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-39-201ENST00000363694 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-4-201ENST00000363810 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-16-201ENST00000363887 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-6-201ENST00000363942 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-42-201ENST00000364273 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 Y_RNA.241-201ENST00000364470 117 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-15-201ENST00000364809 81 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 RNU1-133P-201ENST00000364867 167 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-1-201ENST00000364961 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-26-201ENST00000365067 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-10-201ENST00000365073 81 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 Y_RNA.346-201ENST00000365385 112 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 Y_RNA.355-201ENST00000365462 98 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-43-201ENST00000365503 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-36-201ENST00000365629 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 RNU6-44P-201ENST00000384045 107 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORA27-201ENST00000384323 126 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORA17.3-201ENST00000391159 129 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 U8.17-201ENST00000391292 132 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDND1Q9NY35 AC245517.4-201ENST00000448601 281 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 RNA5SP445-201ENST00000515889 115 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 RNU6-240P-201ENST00000516098 97 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 RNU7-181P-201ENST00000517234 74 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 MIR4778-201ENST00000577635 80 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 AL670379.3-201ENST00000605040 251 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 SNORD115-40-201ENST00000606510 82 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 Y_RNA.783-201ENST00000613546 102 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 AC091932.4-201ENST00000623386 200 ntBASIC2.2□□□□□ -2.06
CLDND1Q9NY35 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLDND1Q9NY35 Y_RNA.494-201ENST00000384432 111 ntBASIC2.19□□□□□ -2.06
CLDND1Q9NY35 MIR526A1-201ENST00000384897 85 ntBASIC2.19□□□□□ -2.06
CLDND1Q9NY35 MIR136-201ENST00000385207 82 ntBASIC2.19□□□□□ -2.06
CLDND1Q9NY35 MIR1263-201ENST00000408324 86 ntBASIC2.19□□□□□ -2.06
CLDND1Q9NY35 MIR1267-201ENST00000408723 78 ntBASIC2.19□□□□□ -2.06
CLDND1Q9NY35 RNA5SP402-201ENST00000517148 110 ntBASIC2.19□□□□□ -2.06
CLDND1Q9NY35 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
CLDND1Q9NY35 AC078899.2-201ENST00000595282 212 ntBASIC2.19□□□□□ -2.06
CLDND1Q9NY35 MTND5P18-201ENST00000445624 1801 ntBASIC2.19□□□□□ -2.06
CLDND1Q9NY35 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLDND1Q9NY35 RNY1P6-201ENST00000384193 109 ntBASIC2.18□□□□□ -2.06
CLDND1Q9NY35 Y_RNA.454-201ENST00000384224 113 ntBASIC2.18□□□□□ -2.06
CLDND1Q9NY35 MIR548A3-201ENST00000385297 97 ntBASIC2.18□□□□□ -2.06
CLDND1Q9NY35 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
CLDND1Q9NY35 AL445685.2-201ENST00000422551 342 ntBASIC2.18□□□□□ -2.06
CLDND1Q9NY35 AC011753.1-201ENST00000451001 220 ntBASIC2.18□□□□□ -2.06
CLDND1Q9NY35 AC090821.2-201ENST00000523552 176 ntBASIC2.18□□□□□ -2.06
CLDND1Q9NY35 RNU6-690P-201ENST00000365242 106 ntBASIC2.17□□□□□ -2.06
CLDND1Q9NY35 RNU1-138P-201ENST00000384093 164 ntBASIC2.17□□□□□ -2.06
CLDND1Q9NY35 Y_RNA.466-201ENST00000384294 113 ntBASIC2.17□□□□□ -2.06
CLDND1Q9NY35 RNA5SP136-201ENST00000410906 107 ntBASIC2.17□□□□□ -2.06
CLDND1Q9NY35 RNA5SP182-201ENST00000516064 82 ntBASIC2.17□□□□□ -2.06
CLDND1Q9NY35 RNU6-589P-201ENST00000516485 107 ntBASIC2.17□□□□□ -2.06
CLDND1Q9NY35 AL121890.5-201ENST00000620848 304 ntBASIC2.17□□□□□ -2.06
CLDND1Q9NY35 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLDND1Q9NY35 AL391516.1-201ENST00000554380 2449 ntBASIC2.17□□□□□ -2.06
CLDND1Q9NY35 AL596211.1-201ENST00000569873 2277 ntBASIC2.16□□□□□ -2.06
CLDND1Q9NY35 RNA5SP276-201ENST00000362580 94 ntBASIC2.16□□□□□ -2.06
CLDND1Q9NY35 SNORA16B-201ENST00000364674 135 ntBASIC2.16□□□□□ -2.06
CLDND1Q9NY35 RNU6-203P-201ENST00000384038 104 ntBASIC2.16□□□□□ -2.06
CLDND1Q9NY35 Y_RNA.528-201ENST00000384575 108 ntBASIC2.16□□□□□ -2.06
CLDND1Q9NY35 MIR499A-201ENST00000384903 122 ntBASIC2.16□□□□□ -2.06
CLDND1Q9NY35 RNY4P18-201ENST00000391107 89 ntBASIC2.16□□□□□ -2.06
CLDND1Q9NY35 RNA5SP57-201ENST00000459463 123 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms