Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RN7SKP200-201ENST00000410564 320 ntBASIC2.39□□□□□ -2.03
PDLIM7Q9NR12 AC069257.2-201ENST00000441819 155 ntBASIC2.39□□□□□ -2.03
PDLIM7Q9NR12 SNORA31.15-201ENST00000516771 132 ntBASIC2.39□□□□□ -2.03
PDLIM7Q9NR12 MIR6132-201ENST00000622083 109 ntBASIC2.39□□□□□ -2.03
PDLIM7Q9NR12 AC027279.3-201ENST00000625055 122 ntBASIC2.39□□□□□ -2.03
PDLIM7Q9NR12 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
PDLIM7Q9NR12 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 Y_RNA.85-201ENST00000363014 111 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 RNU6-1255P-201ENST00000363434 112 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 Y_RNA.198-201ENST00000364013 98 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 Y_RNA.309-201ENST00000365046 111 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 SNORA4.2-201ENST00000365313 147 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 RNY1P6-201ENST00000384193 109 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 Y_RNA.495-201ENST00000384435 112 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 U8.16-201ENST00000391279 133 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 U8.17-201ENST00000391292 132 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 AL034345.1-201ENST00000407768 123 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 RNU6-554P-201ENST00000410466 106 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 AC108667.1-201ENST00000428618 249 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 RNU7-80P-201ENST00000459562 61 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 RNVU1-2-201ENST00000516326 135 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 AL596211.1-201ENST00000569873 2277 ntBASIC2.38□□□□□ -2.03
PDLIM7Q9NR12 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.37□□□□□ -2.03
PDLIM7Q9NR12 MIR342-201ENST00000362212 99 ntBASIC2.37□□□□□ -2.03
PDLIM7Q9NR12 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PDLIM7Q9NR12 AC104435.1-201ENST00000483483 166 ntBASIC2.37□□□□□ -2.03
PDLIM7Q9NR12 SUMO2P16-201ENST00000519475 264 ntBASIC2.37□□□□□ -2.03
PDLIM7Q9NR12 HSPE1P19-201ENST00000603327 295 ntBASIC2.37□□□□□ -2.03
PDLIM7Q9NR12 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.37□□□□□ -2.03
PDLIM7Q9NR12 AL035470.1-201ENST00000622571 220 ntBASIC2.37□□□□□ -2.03
PDLIM7Q9NR12 AC091932.4-201ENST00000623386 200 ntBASIC2.37□□□□□ -2.03
PDLIM7Q9NR12 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.37□□□□□ -2.03
PDLIM7Q9NR12 SNORA63.5-201ENST00000363548 123 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 SNORA63D-201ENST00000364359 132 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 Y_RNA.298-201ENST00000364960 107 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 RNU6-32P-201ENST00000383948 107 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 RNU6-13P-201ENST00000384248 107 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 RNU6-12P-201ENST00000384604 107 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 RNU6-41P-201ENST00000384741 107 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 MIR583-201ENST00000384846 75 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 MT-TI-201ENST00000387365 69 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 RNA5SP450-201ENST00000411206 102 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 SNX2P2-201ENST00000424553 323 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 AC015922.2-201ENST00000435593 184 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 RNU7-164P-201ENST00000459221 62 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 RNA5SP168-201ENST00000516642 112 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 ZNF355P-201ENST00000427301 3216 ntBASIC2.36□□□□□ -2.03
PDLIM7Q9NR12 RNU6-414P-201ENST00000363705 104 ntBASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 Y_RNA.213-201ENST00000364178 111 ntBASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 Y_RNA.241-201ENST00000364470 117 ntBASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 Y_RNA.454-201ENST00000384224 113 ntBASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 RNU6-424P-201ENST00000384367 105 ntBASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 SNORA17.3-201ENST00000391159 129 ntBASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 AL627390.1-201ENST00000396055 340 ntBASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 RNU6-830P-201ENST00000516353 107 ntBASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 MIR4287-201ENST00000579398 78 ntBASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PDLIM7Q9NR12 RNY4P6-201ENST00000363667 96 ntBASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 RNU4-16P-201ENST00000364737 141 ntBASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 SNORA27-201ENST00000384323 126 ntBASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 Y_RNA.494-201ENST00000384432 111 ntBASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 RNU6-950P-201ENST00000384651 107 ntBASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 MIR759-201ENST00000390224 91 ntBASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 RPS29P24-201ENST00000486345 171 ntBASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 RNU7-12P-201ENST00000516030 62 ntBASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 AC121758.2-201ENST00000553271 193 ntBASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 MIR4305-201ENST00000583252 102 ntBASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 snoU13.31-201ENST00000607291 104 ntBASIC2.34□□□□□ -2.03
PDLIM7Q9NR12 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 RNU6-833P-201ENST00000363486 107 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 RNU6-1104P-201ENST00000384723 104 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 RNU6-1031P-201ENST00000384773 107 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 RNU2-7P-201ENST00000410794 178 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 RNU7-123P-201ENST00000515911 60 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 RNU7-181P-201ENST00000517234 74 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 AC022523.2-201ENST00000561045 150 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 MIR4778-201ENST00000577635 80 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 MIR6895-201ENST00000613497 78 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 AL442644.1-201ENST00000454390 3105 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 AL589743.1-201ENST00000551932 2712 ntBASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDLIM7Q9NR12 Y_RNA.163-201ENST00000363702 113 ntBASIC2.32□□□□□ -2.04
PDLIM7Q9NR12 Y_RNA.362-201ENST00000365518 110 ntBASIC2.32□□□□□ -2.04
PDLIM7Q9NR12 SNORA48.1-201ENST00000390879 135 ntBASIC2.32□□□□□ -2.04
PDLIM7Q9NR12 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.32□□□□□ -2.04
PDLIM7Q9NR12 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.32□□□□□ -2.04
PDLIM7Q9NR12 RNU2-35P-201ENST00000516446 142 ntBASIC2.32□□□□□ -2.04
PDLIM7Q9NR12 RNA5SP437-201ENST00000517249 129 ntBASIC2.32□□□□□ -2.04
PDLIM7Q9NR12 AC106754.2-201ENST00000623006 233 ntBASIC2.32□□□□□ -2.04
PDLIM7Q9NR12 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms