Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 RNU6-135P-201ENST00000516769 101 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 RNU2-31P-201ENST00000516954 155 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 AC124312.5-201ENST00000604451 268 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 AC084782.3-201ENST00000612282 578 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-490P-201ENST00000362985 107 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-899P-201ENST00000363947 107 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 SNORA2A-201ENST00000383885 135 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 SNORD63-201ENST00000384262 68 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-937P-201ENST00000384325 106 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 AL160004.2-201ENST00000432935 350 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU7-96P-201ENST00000459535 64 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-848P-201ENST00000515948 107 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-617P-201ENST00000516147 107 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 SNORD77.4-201ENST00000516158 81 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-473P-201ENST00000516164 107 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-504P-201ENST00000516568 104 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 SNORA31.14-201ENST00000516728 116 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-699P-201ENST00000517081 110 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNA5SP47-201ENST00000517230 109 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 MIR4743-201ENST00000584576 69 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 AL049861.1-201ENST00000603130 150 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 AC133104.2-201ENST00000615272 193 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 AC091304.10-201ENST00000641554 121 ntBASIC-0.2□□□□□ -2.44
VCX3AQ9NNX9 RNU6-845P-201ENST00000362578 103 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 RNY3-201ENST00000365484 102 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 RNU6-383P-201ENST00000410864 94 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 RPL39P25-201ENST00000449384 154 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 AL138752.1-201ENST00000452964 351 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 RNU2-11P-201ENST00000459191 187 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 RNU6-998P-201ENST00000515894 101 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 AL121655.1-201ENST00000605811 308 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 MIR6082-201ENST00000613604 109 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 AP001282.2-201ENST00000616149 309 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 AC099654.14-201ENST00000638599 341 ntBASIC-0.21□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 RNU6-144P-201ENST00000383951 107 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 RNU6-756P-201ENST00000383997 107 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 RNU6-929P-201ENST00000384429 107 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 RNU6-763P-201ENST00000390865 106 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 SNORD77.3-201ENST00000391113 65 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 SNORA26-201ENST00000391286 122 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 RNU6-693P-201ENST00000516134 107 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 RNU6-559P-201ENST00000516151 98 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 RNU6-191P-201ENST00000516295 94 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 RNU4-77P-201ENST00000516692 156 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 MIR4662B-201ENST00000579498 81 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 AL662814.1-201ENST00000617364 121 ntBASIC-0.22□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 RNU6-403P-201ENST00000363163 104 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 SNORA32.1-201ENST00000364514 115 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 SNORD24-201ENST00000383884 75 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 SNORD28-201ENST00000384706 75 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 RNU6-765P-201ENST00000516916 99 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 MIR4639-201ENST00000584938 69 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 AC022709.1-201ENST00000615967 87 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.23□□□□□ -2.45
VCX3AQ9NNX9 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 RNU6-888P-201ENST00000363010 101 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 SNORD81.2-201ENST00000365153 76 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 SNORD61-201ENST00000384252 73 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 RNU6-291P-201ENST00000384720 107 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 SNORA26.6-201ENST00000391256 115 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 MIR892B-201ENST00000401279 77 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 RNA5SP237-201ENST00000410414 113 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 MTND1P14-201ENST00000427400 950 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 MTND1P34-201ENST00000438556 671 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 RPL39P34-201ENST00000477141 156 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 RNA5SP436-201ENST00000516020 115 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 RNU6-782P-201ENST00000516852 104 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 MIR4752-201ENST00000579672 72 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 AC113139.1-201ENST00000605049 239 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 RNU1-29P-201ENST00000606574 126 ntBASIC-0.24□□□□□ -2.45
VCX3AQ9NNX9 SNORD113-5-201ENST00000607261 78 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms