Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AP006437.1-201ENST00000641440 3685 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-34-201ENST00000362441 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-12-201ENST00000362583 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-29-201ENST00000362834 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-9-201ENST00000362912 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-21-201ENST00000362963 81 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-14-201ENST00000363090 81 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-13-201ENST00000363358 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-41-201ENST00000363608 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-11-201ENST00000363616 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-5-201ENST00000363633 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-39-201ENST00000363694 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-4-201ENST00000363810 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-16-201ENST00000363887 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-6-201ENST00000363942 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-42-201ENST00000364273 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORA63D-201ENST00000364359 132 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD73B-201ENST00000364394 72 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-15-201ENST00000364809 81 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-1-201ENST00000364961 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-294P-201ENST00000364999 102 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-26-201ENST00000365067 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-10-201ENST00000365073 81 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-43-201ENST00000365503 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-36-201ENST00000365629 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-816P-201ENST00000390914 107 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-1268P-201ENST00000391214 107 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-1239P-201ENST00000391310 107 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 UBL5P3-201ENST00000475112 231 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 RPL23AP63-201ENST00000498752 471 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-970P-201ENST00000516312 107 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 RNA5SP137-201ENST00000516833 135 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 AC004812.1-201ENST00000540773 146 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 SNORD115-40-201ENST00000606510 82 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 AC103810.6-201ENST00000606708 136 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 AC067747.1-201ENST00000608026 250 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 MIR6895-201ENST00000613497 78 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 MIR1291-201ENST00000627649 87 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 AL162726.3-218ENST00000636401 95 ntBASIC2.09□□□□□ -2.07
SEC61A2Q9H9S3 AC092881.1-201ENST00000638218 2733 ntBASIC2.09□□□□□ -2.08
SEC61A2Q9H9S3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 Y_RNA.171-201ENST00000363760 102 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 RNA5SP126-201ENST00000365092 109 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 MIR488-201ENST00000365739 83 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 Y_RNA.544-201ENST00000384650 113 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 RNU6-950P-201ENST00000384651 107 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 RNA5SP501-201ENST00000410990 112 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 AL022718.1-201ENST00000412004 84 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 AC008413.1-201ENST00000511864 177 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 RNU6-958P-201ENST00000516995 106 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 MIR4513-201ENST00000581077 86 ntBASIC2.08□□□□□ -2.08
SEC61A2Q9H9S3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 Y_RNA.370-201ENST00000365589 108 ntBASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 RNY1P7-201ENST00000384743 110 ntBASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 MIR520A-201ENST00000384862 85 ntBASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 RNU7-67P-201ENST00000459003 62 ntBASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 AC107297.1-201ENST00000459991 176 ntBASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 SNORD14A-201ENST00000606526 91 ntBASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 AC087741.2-201ENST00000619415 172 ntBASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 AC095038.3-201ENST00000634439 195 ntBASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.07□□□□□ -2.08
SEC61A2Q9H9S3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 Y_RNA.531-201ENST00000384589 121 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 MIR452-201ENST00000385020 85 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 MIR136-201ENST00000385207 82 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 SNORA48.1-201ENST00000390879 135 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 RNA5SP465-201ENST00000391195 109 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 HMGN2P39-201ENST00000398005 273 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 RPS3AP1-201ENST00000413190 320 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 POLR2J4-204ENST00000418424 324 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 AC113410.1-201ENST00000505029 247 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 RNU6-904P-201ENST00000516206 101 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 RNU6-1258P-201ENST00000516911 111 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 AC121758.2-201ENST00000553271 193 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 AC021506.2-201ENST00000612354 169 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 MIR1255B1-201ENST00000636325 63 ntBASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SEC61A2Q9H9S3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 RNU6-112P-201ENST00000363599 104 ntBASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 SNORA67.1-201ENST00000364749 141 ntBASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 SNORD28B-201ENST00000390993 75 ntBASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 SUB1P4-201ENST00000566062 339 ntBASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 MIR4709-201ENST00000577272 72 ntBASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 MIR5694-201ENST00000581190 76 ntBASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 Y_RNA.773-201ENST00000607168 90 ntBASIC2.05□□□□□ -2.08
SEC61A2Q9H9S3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SEC61A2Q9H9S3 SNORA1.2-201ENST00000365189 134 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms