Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 PCNPP3-201ENST00000393579 471 ntBASIC1.55□□□□□ -2.16
HIPK3Q9H422 SNRPGP13-201ENST00000442212 177 ntBASIC1.55□□□□□ -2.16
HIPK3Q9H422 RNU6-917P-201ENST00000516294 104 ntBASIC1.55□□□□□ -2.16
HIPK3Q9H422 RNU6-504P-201ENST00000516568 104 ntBASIC1.55□□□□□ -2.16
HIPK3Q9H422 U8.1-201ENST00000362843 134 ntBASIC1.54□□□□□ -2.16
HIPK3Q9H422 SNORD1A-201ENST00000364968 72 ntBASIC1.54□□□□□ -2.16
HIPK3Q9H422 SNORA2.2-201ENST00000365473 135 ntBASIC1.54□□□□□ -2.16
HIPK3Q9H422 SNORD24-201ENST00000383884 75 ntBASIC1.54□□□□□ -2.16
HIPK3Q9H422 Y_RNA.441-201ENST00000384123 112 ntBASIC1.54□□□□□ -2.16
HIPK3Q9H422 MIR7-2-201ENST00000384970 110 ntBASIC1.54□□□□□ -2.16
HIPK3Q9H422 MIR136-201ENST00000385207 82 ntBASIC1.54□□□□□ -2.16
HIPK3Q9H422 MIR548O-201ENST00000408583 114 ntBASIC1.54□□□□□ -2.16
HIPK3Q9H422 RNU5E-9P-201ENST00000411164 104 ntBASIC1.54□□□□□ -2.16
HIPK3Q9H422 AC092991.1-201ENST00000477176 376 ntBASIC1.54□□□□□ -2.16
HIPK3Q9H422 AC023790.1-201ENST00000482174 347 ntBASIC1.54□□□□□ -2.16
HIPK3Q9H422 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.54□□□□□ -2.16
HIPK3Q9H422 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HIPK3Q9H422 RNU6-888P-201ENST00000363010 101 ntBASIC1.53□□□□□ -2.16
HIPK3Q9H422 Y_RNA.547-201ENST00000384654 119 ntBASIC1.53□□□□□ -2.16
HIPK3Q9H422 AC006461.1-201ENST00000412637 326 ntBASIC1.53□□□□□ -2.16
HIPK3Q9H422 RNU1-98P-201ENST00000458992 160 ntBASIC1.53□□□□□ -2.16
HIPK3Q9H422 RNU6-693P-201ENST00000516134 107 ntBASIC1.53□□□□□ -2.16
HIPK3Q9H422 RNU6-830P-201ENST00000516353 107 ntBASIC1.53□□□□□ -2.16
HIPK3Q9H422 RNU7-25P-201ENST00000516544 62 ntBASIC1.53□□□□□ -2.16
HIPK3Q9H422 AC007751.1-201ENST00000529260 376 ntBASIC1.53□□□□□ -2.16
HIPK3Q9H422 AC090049.2-201ENST00000550377 109 ntBASIC1.53□□□□□ -2.16
HIPK3Q9H422 MIR378D2-201ENST00000580636 98 ntBASIC1.53□□□□□ -2.16
HIPK3Q9H422 FAM106DP-201ENST00000586416 501 ntBASIC1.53□□□□□ -2.16
HIPK3Q9H422 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.52□□□□□ -2.17
HIPK3Q9H422 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HIPK3Q9H422 RNU4-84P-201ENST00000364200 139 ntBASIC1.52□□□□□ -2.17
HIPK3Q9H422 Y_RNA.357-201ENST00000365487 109 ntBASIC1.52□□□□□ -2.17
HIPK3Q9H422 Y_RNA.540-201ENST00000384638 111 ntBASIC1.52□□□□□ -2.17
HIPK3Q9H422 MIR548A2-201ENST00000384956 97 ntBASIC1.52□□□□□ -2.17
HIPK3Q9H422 RNU6-1270P-201ENST00000517128 108 ntBASIC1.52□□□□□ -2.17
HIPK3Q9H422 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.52□□□□□ -2.17
HIPK3Q9H422 AL365434.2-201ENST00000607979 234 ntBASIC1.52□□□□□ -2.17
HIPK3Q9H422 AC015726.2-201ENST00000620112 122 ntBASIC1.52□□□□□ -2.17
HIPK3Q9H422 AP000648.3-201ENST00000623539 4507 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
HIPK3Q9H422 MIR96-201ENST00000362288 78 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 Y_RNA.180-201ENST00000363867 113 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 RNU6-978P-201ENST00000364371 103 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 MIR518F-201ENST00000384973 87 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 MIR548I3-201ENST00000408378 149 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 MIR548I1-201ENST00000408810 149 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 RNU6-1135P-201ENST00000411083 103 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 AC079140.2-201ENST00000506193 142 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.51□□□□□ -2.17
HIPK3Q9H422 AC107027.2-201ENST00000512197 115 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 RNU4-57P-201ENST00000515980 135 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 SNORD116-25-201ENST00000516517 92 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 AL513534.2-201ENST00000603836 250 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 AL161722.3-201ENST00000605789 2983 ntBASIC1.51□□□□□ -2.17
HIPK3Q9H422 RNU6-239P-201ENST00000390990 99 ntBASIC1.5□□□□□ -2.17
HIPK3Q9H422 RNU1-78P-201ENST00000391248 165 ntBASIC1.5□□□□□ -2.17
HIPK3Q9H422 RNU6-322P-201ENST00000516010 103 ntBASIC1.5□□□□□ -2.17
HIPK3Q9H422 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
HIPK3Q9H422 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HIPK3Q9H422 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.5□□□□□ -2.17
HIPK3Q9H422 SNORD33-201ENST00000362761 85 ntBASIC1.49□□□□□ -2.17
HIPK3Q9H422 SNORD115-28-201ENST00000363931 81 ntBASIC1.49□□□□□ -2.17
HIPK3Q9H422 Y_RNA.272-201ENST00000364696 102 ntBASIC1.49□□□□□ -2.17
HIPK3Q9H422 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
HIPK3Q9H422 AL451046.2-201ENST00000403074 277 ntBASIC1.49□□□□□ -2.17
HIPK3Q9H422 AC027119.1-201ENST00000440877 241 ntBASIC1.49□□□□□ -2.17
HIPK3Q9H422 RNU7-121P-201ENST00000516604 62 ntBASIC1.49□□□□□ -2.17
HIPK3Q9H422 RNU6-922P-201ENST00000516753 99 ntBASIC1.49□□□□□ -2.17
HIPK3Q9H422 AC019176.1-201ENST00000518519 225 ntBASIC1.49□□□□□ -2.17
HIPK3Q9H422 Y_RNA.337-201ENST00000365312 102 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 SNORA1-201ENST00000384107 130 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 RNU6-209P-201ENST00000384118 107 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 Y_RNA.521-201ENST00000384560 114 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 MIR613-201ENST00000385248 95 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 SNORD41-201ENST00000386967 70 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 U8.17-201ENST00000391292 132 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 RNU6-394P-201ENST00000410735 107 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 SNX2P2-201ENST00000424553 323 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 SNORD123-201ENST00000459473 70 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 SNORA18.7-201ENST00000516910 131 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 SNORA74.3-201ENST00000517108 154 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 AC104465.1-201ENST00000611365 139 ntBASIC1.48□□□□□ -2.17
HIPK3Q9H422 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.48□□□□□ -2.17
HIPK3Q9H422 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HIPK3Q9H422 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HIPK3Q9H422 RNU6-768P-201ENST00000384683 107 ntBASIC1.47□□□□□ -2.17
HIPK3Q9H422 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
HIPK3Q9H422 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.47□□□□□ -2.17
HIPK3Q9H422 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.47□□□□□ -2.17
HIPK3Q9H422 AF228730.3-201ENST00000436691 102 ntBASIC1.47□□□□□ -2.17
HIPK3Q9H422 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
HIPK3Q9H422 AC004223.1-201ENST00000479840 271 ntBASIC1.47□□□□□ -2.17
HIPK3Q9H422 RNA5SP480-201ENST00000516840 109 ntBASIC1.47□□□□□ -2.17
HIPK3Q9H422 MIR3937-201ENST00000580135 106 ntBASIC1.47□□□□□ -2.17
HIPK3Q9H422 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
HIPK3Q9H422 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
HIPK3Q9H422 AC134878.1-201ENST00000619901 243 ntBASIC1.47□□□□□ -2.17
HIPK3Q9H422 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
HIPK3Q9H422 Y_RNA.37-201ENST00000362606 108 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 252.3 ms