Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 RN7SL274P-201ENST00000492268 272 ntBASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 AC019176.1-201ENST00000518519 225 ntBASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 AC104984.5-201ENST00000586878 94 ntBASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 MIR7843-201ENST00000622274 79 ntBASIC2.07□□□□□ -2.08
CCDC113Q9H0I3 MIR342-201ENST00000362212 99 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-34-201ENST00000362441 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-12-201ENST00000362583 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-29-201ENST00000362834 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-9-201ENST00000362912 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-21-201ENST00000362963 81 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-14-201ENST00000363090 81 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-13-201ENST00000363358 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-41-201ENST00000363608 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-11-201ENST00000363616 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-5-201ENST00000363633 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-39-201ENST00000363694 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-4-201ENST00000363810 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-16-201ENST00000363887 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-6-201ENST00000363942 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-42-201ENST00000364273 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-15-201ENST00000364809 81 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-1-201ENST00000364961 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-26-201ENST00000365067 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-10-201ENST00000365073 81 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 Y_RNA.351-201ENST00000365436 96 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-43-201ENST00000365503 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-36-201ENST00000365629 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 MTATP6P21-201ENST00000440681 189 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 RNU7-67P-201ENST00000459003 62 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 RNU6-426P-201ENST00000516464 97 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 RNU7-43P-201ENST00000516554 64 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 RNU6-295P-201ENST00000516901 104 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 AL357312.1-201ENST00000603879 298 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 AP001485.1-201ENST00000604799 199 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 SNORD115-40-201ENST00000606510 82 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
CCDC113Q9H0I3 Y_RNA.52-201ENST00000362760 96 ntBASIC2.05□□□□□ -2.08
CCDC113Q9H0I3 SNORA20-201ENST00000384662 132 ntBASIC2.05□□□□□ -2.08
CCDC113Q9H0I3 MIR9-3-201ENST00000385084 90 ntBASIC2.05□□□□□ -2.08
CCDC113Q9H0I3 RNU7-80P-201ENST00000459562 61 ntBASIC2.05□□□□□ -2.08
CCDC113Q9H0I3 RPS26P48-201ENST00000491713 339 ntBASIC2.05□□□□□ -2.08
CCDC113Q9H0I3 RPS29P11-201ENST00000496507 171 ntBASIC2.05□□□□□ -2.08
CCDC113Q9H0I3 RNU6-1149P-201ENST00000516810 97 ntBASIC2.05□□□□□ -2.08
CCDC113Q9H0I3 AC090821.2-201ENST00000523552 176 ntBASIC2.05□□□□□ -2.08
CCDC113Q9H0I3 AC091895.1-201ENST00000624494 256 ntBASIC2.05□□□□□ -2.08
CCDC113Q9H0I3 MTND5P32-201ENST00000560711 1802 ntBASIC2.05□□□□□ -2.08
CCDC113Q9H0I3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 Y_RNA.440-201ENST00000384120 114 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 SNORA70.7-201ENST00000384159 133 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 SNORD28B-201ENST00000390993 75 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 RNU6-460P-201ENST00000391158 108 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 SNORA26.9-201ENST00000391322 122 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 AL591806.2-201ENST00000433122 173 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 RNA5SP272-201ENST00000516095 111 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 RNU6-947P-201ENST00000516264 106 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 AP001328.1-201ENST00000528550 176 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 MIR4764-201ENST00000580680 88 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 GHRLOS.1-201ENST00000610995 70 ntBASIC2.04□□□□□ -2.08
CCDC113Q9H0I3 MIR302B-201ENST00000362188 73 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 Y_RNA.251-201ENST00000364551 99 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 Y_RNA.420-201ENST00000384043 110 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 Y_RNA.454-201ENST00000384224 113 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 Y_RNA.568-201ENST00000384742 113 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 SNORA40.18-201ENST00000391200 128 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 RNU1-78P-201ENST00000391248 165 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 AL445685.2-201ENST00000422551 342 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 RNU7-197P-201ENST00000458836 62 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 snoU13.23-201ENST00000458863 104 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 MIR4422-201ENST00000581938 83 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 AL442644.1-201ENST00000454390 3105 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 AC010332.2-201ENST00000613083 1904 ntBASIC2.03□□□□□ -2.08
CCDC113Q9H0I3 MIR934-201ENST00000401241 83 ntBASIC2.02□□□□□ -2.09
CCDC113Q9H0I3 RPL31P63-201ENST00000422565 375 ntBASIC2.02□□□□□ -2.09
CCDC113Q9H0I3 RPL39P39-201ENST00000455840 151 ntBASIC2.02□□□□□ -2.09
CCDC113Q9H0I3 RPS29P24-201ENST00000486345 171 ntBASIC2.02□□□□□ -2.09
CCDC113Q9H0I3 MIR376A2-201ENST00000636782 80 ntBASIC2.02□□□□□ -2.09
CCDC113Q9H0I3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC113Q9H0I3 MIR302D-201ENST00000362275 68 ntBASIC2.01□□□□□ -2.09
CCDC113Q9H0I3 U8.1-201ENST00000362843 134 ntBASIC2.01□□□□□ -2.09
CCDC113Q9H0I3 Y_RNA.120-201ENST00000363304 110 ntBASIC2.01□□□□□ -2.09
CCDC113Q9H0I3 Y_RNA.494-201ENST00000384432 111 ntBASIC2.01□□□□□ -2.09
CCDC113Q9H0I3 MIR570-201ENST00000384917 97 ntBASIC2.01□□□□□ -2.09
CCDC113Q9H0I3 AL392103.1-201ENST00000447000 198 ntBASIC2.01□□□□□ -2.09
CCDC113Q9H0I3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC113Q9H0I3 RNU5E-3P-201ENST00000515913 68 ntBASIC2.01□□□□□ -2.09
CCDC113Q9H0I3 RNU6-958P-201ENST00000516995 106 ntBASIC2.01□□□□□ -2.09
CCDC113Q9H0I3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CCDC113Q9H0I3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CCDC113Q9H0I3 RNY1P11-201ENST00000363759 113 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 RNU6-704P-201ENST00000364162 103 ntBASIC2□□□□□ -2.09
CCDC113Q9H0I3 RNU1-133P-201ENST00000364867 167 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms