Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RNU7-6P-201ENST00000516845 62 ntBASIC2.7□□□□□ -1.98
ZKSCAN3Q9BRR0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 SNORA70.7-201ENST00000384159 133 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 Y_RNA.494-201ENST00000384432 111 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 HMGN2P39-201ENST00000398005 273 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 SNORA3.2-201ENST00000408221 125 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 MIR1302-4-201ENST00000408701 150 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 MIR1912-201ENST00000410389 80 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 Z98742.3-201ENST00000418637 326 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 RNU2-11P-201ENST00000459191 187 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 UBL5P3-201ENST00000475112 231 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 RNA5SP24-201ENST00000516478 95 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 AL590808.1-201ENST00000618696 141 ntBASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
ZKSCAN3Q9BRR0 RNU6-301P-201ENST00000384277 107 ntBASIC2.68□□□□□ -1.98
ZKSCAN3Q9BRR0 MIR590-201ENST00000385008 97 ntBASIC2.68□□□□□ -1.98
ZKSCAN3Q9BRR0 MIR136-201ENST00000385207 82 ntBASIC2.68□□□□□ -1.98
ZKSCAN3Q9BRR0 RNA5SP181-201ENST00000410246 98 ntBASIC2.68□□□□□ -1.98
ZKSCAN3Q9BRR0 RPL39P25-201ENST00000449384 154 ntBASIC2.68□□□□□ -1.98
ZKSCAN3Q9BRR0 RNU7-34P-201ENST00000459394 64 ntBASIC2.68□□□□□ -1.98
ZKSCAN3Q9BRR0 RPL23AP63-201ENST00000498752 471 ntBASIC2.68□□□□□ -1.98
ZKSCAN3Q9BRR0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.68□□□□□ -1.98
ZKSCAN3Q9BRR0 MIR5007-201ENST00000583098 95 ntBASIC2.68□□□□□ -1.98
ZKSCAN3Q9BRR0 AC064859.1-201ENST00000624741 174 ntBASIC2.68□□□□□ -1.98
ZKSCAN3Q9BRR0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 MIR6073-201ENST00000352083 89 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 MIR516B2-201ENST00000385190 85 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 RNU6-893P-201ENST00000458841 100 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 RPS23P4-201ENST00000487908 423 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 SNORA31.4-201ENST00000516049 129 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 RNA5SP481-201ENST00000516814 122 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 AC004812.1-201ENST00000540773 146 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 AC141557.1-201ENST00000540982 400 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 SUB1P4-201ENST00000566062 339 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 MIR4658-201ENST00000584344 65 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 AL513423.1-201ENST00000621695 132 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 MIR6766-201ENST00000622641 72 ntBASIC2.67□□□□□ -1.98
ZKSCAN3Q9BRR0 AC092881.1-201ENST00000638218 2733 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 Y_RNA.370-201ENST00000365589 108 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 Y_RNA.531-201ENST00000384589 121 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 MIR221-201ENST00000385135 110 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 RNU6-816P-201ENST00000390914 107 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 RNU6-1268P-201ENST00000391214 107 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 RNU6-1239P-201ENST00000391310 107 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 SNORA11.2-201ENST00000408318 127 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 RNU6-904P-201ENST00000516206 101 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 RNU7-53P-201ENST00000516705 60 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 RNU6-158P-201ENST00000517104 100 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 RNA5SP437-201ENST00000517249 129 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 MIR4709-201ENST00000577272 72 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 AL137847.3-201ENST00000611521 109 ntBASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.66□□□□□ -1.98
ZKSCAN3Q9BRR0 RNU6-661P-201ENST00000362409 107 ntBASIC2.65□□□□□ -1.99
ZKSCAN3Q9BRR0 Y_RNA.299-201ENST00000364973 94 ntBASIC2.65□□□□□ -1.99
ZKSCAN3Q9BRR0 AC021506.2-201ENST00000612354 169 ntBASIC2.65□□□□□ -1.99
ZKSCAN3Q9BRR0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.65□□□□□ -1.99
ZKSCAN3Q9BRR0 MIR2052-201ENST00000636055 55 ntBASIC2.65□□□□□ -1.99
ZKSCAN3Q9BRR0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-112P-201ENST00000363599 104 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-294P-201ENST00000364999 102 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 Y_RNA.507-201ENST00000384500 99 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-296P-201ENST00000384608 107 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 SNORA19.1-201ENST00000410656 129 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 RNA5SP501-201ENST00000410990 112 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 POLR2J4-204ENST00000418424 324 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 AL512326.2-201ENST00000426359 151 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 snoU13.27-201ENST00000459278 104 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-109P-201ENST00000516364 107 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-184P-201ENST00000516514 107 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 MIR3152-201ENST00000579801 74 ntBASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
ZKSCAN3Q9BRR0 SNORD115-19-201ENST00000363098 82 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 SNORD115-18-201ENST00000363293 82 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 SNORD115-17-201ENST00000364612 82 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-1131P-201ENST00000364955 107 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 MIR660-201ENST00000385235 97 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-1319P-201ENST00000390855 104 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-747P-201ENST00000390928 104 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-241P-201ENST00000391148 104 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 RNA5SP261-201ENST00000410536 106 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6-177P-201ENST00000411257 104 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 AC093850.1-201ENST00000454121 251 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 SNORA31.15-201ENST00000516771 132 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 MIR4446-201ENST00000578505 67 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 AC087741.2-201ENST00000619415 172 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 ZNF658B-202ENST00000615961 3375 ntBASIC2.63□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU4-36P-201ENST00000364294 144 ntBASIC2.62□□□□□ -1.99
ZKSCAN3Q9BRR0 RN7SKP192-201ENST00000411291 327 ntBASIC2.62□□□□□ -1.99
ZKSCAN3Q9BRR0 RNA5SP270-201ENST00000411361 118 ntBASIC2.62□□□□□ -1.99
ZKSCAN3Q9BRR0 PGBD4P5-201ENST00000445958 426 ntBASIC2.62□□□□□ -1.99
ZKSCAN3Q9BRR0 RPS29P29-201ENST00000456396 171 ntBASIC2.62□□□□□ -1.99
ZKSCAN3Q9BRR0 RNU7-67P-201ENST00000459003 62 ntBASIC2.62□□□□□ -1.99
ZKSCAN3Q9BRR0 U1.36-201ENST00000620684 176 ntBASIC2.62□□□□□ -1.99
ZKSCAN3Q9BRR0 AC010297.1-201ENST00000623948 149 ntBASIC2.62□□□□□ -1.99
ZKSCAN3Q9BRR0 SNORA24-201ENST00000384096 131 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 261.9 ms