Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNU7-43P-201ENST00000516554 64 ntBASIC1.75□□□□□ -2.13
VRK1Q99986 SNORD36C-201ENST00000516733 66 ntBASIC1.75□□□□□ -2.13
VRK1Q99986 RNU7-181P-201ENST00000517234 74 ntBASIC1.75□□□□□ -2.13
VRK1Q99986 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
VRK1Q99986 RNU6-774P-201ENST00000363238 107 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 Y_RNA.370-201ENST00000365589 108 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 Y_RNA.440-201ENST00000384120 114 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 Y_RNA.584-201ENST00000391090 114 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 AC027119.1-201ENST00000440877 241 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 AL392103.1-201ENST00000447000 198 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 AC107297.1-201ENST00000459991 176 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.74□□□□□ -2.13
VRK1Q99986 AC108210.2-201ENST00000503681 201 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 RNU2-13P-201ENST00000515909 113 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 MIR548AR-201ENST00000582191 57 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.74□□□□□ -2.13
VRK1Q99986 GHRLOS.1-201ENST00000610995 70 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.74□□□□□ -2.13
VRK1Q99986 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.74□□□□□ -2.13
VRK1Q99986 MIR376A2-201ENST00000636782 80 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
VRK1Q99986 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VRK1Q99986 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VRK1Q99986 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VRK1Q99986 Y_RNA.241-201ENST00000364470 117 ntBASIC1.73□□□□□ -2.13
VRK1Q99986 RNU6-1067P-201ENST00000384752 107 ntBASIC1.73□□□□□ -2.13
VRK1Q99986 MIR613-201ENST00000385248 95 ntBASIC1.73□□□□□ -2.13
VRK1Q99986 SNORD41-201ENST00000386967 70 ntBASIC1.73□□□□□ -2.13
VRK1Q99986 CYCSP49-201ENST00000420810 319 ntBASIC1.73□□□□□ -2.13
VRK1Q99986 SNX2P2-201ENST00000424553 323 ntBASIC1.73□□□□□ -2.13
VRK1Q99986 RPS26P48-201ENST00000491713 339 ntBASIC1.73□□□□□ -2.13
VRK1Q99986 SCARNA15-202ENST00000516881 127 ntBASIC1.73□□□□□ -2.13
VRK1Q99986 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.73□□□□□ -2.13
VRK1Q99986 MIR4422-201ENST00000581938 83 ntBASIC1.73□□□□□ -2.13
VRK1Q99986 AL357312.1-201ENST00000603879 298 ntBASIC1.73□□□□□ -2.13
VRK1Q99986 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.73□□□□□ -2.13
VRK1Q99986 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.72□□□□□ -2.13
VRK1Q99986 RNA5SP432-201ENST00000362480 116 ntBASIC1.72□□□□□ -2.13
VRK1Q99986 Y_RNA.52-201ENST00000362760 96 ntBASIC1.72□□□□□ -2.13
VRK1Q99986 SNORA27-201ENST00000384323 126 ntBASIC1.72□□□□□ -2.13
VRK1Q99986 AC245517.4-201ENST00000448601 281 ntBASIC1.72□□□□□ -2.13
VRK1Q99986 SNORA25.12-201ENST00000516202 82 ntBASIC1.72□□□□□ -2.13
VRK1Q99986 RNU6-548P-201ENST00000517083 115 ntBASIC1.72□□□□□ -2.13
VRK1Q99986 AC015712.3-201ENST00000559380 164 ntBASIC1.72□□□□□ -2.13
VRK1Q99986 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
VRK1Q99986 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
VRK1Q99986 AP001340.1-201ENST00000624405 217 ntBASIC1.72□□□□□ -2.13
VRK1Q99986 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
VRK1Q99986 Y_RNA.120-201ENST00000363304 110 ntBASIC1.71□□□□□ -2.14
VRK1Q99986 RNY1P11-201ENST00000363759 113 ntBASIC1.71□□□□□ -2.14
VRK1Q99986 RNU6-1065P-201ENST00000384513 106 ntBASIC1.71□□□□□ -2.14
VRK1Q99986 Y_RNA.537-201ENST00000384626 109 ntBASIC1.71□□□□□ -2.14
VRK1Q99986 Y_RNA.568-201ENST00000384742 113 ntBASIC1.71□□□□□ -2.14
VRK1Q99986 MIR583-201ENST00000384846 75 ntBASIC1.71□□□□□ -2.14
VRK1Q99986 SNORD28B-201ENST00000390993 75 ntBASIC1.71□□□□□ -2.14
VRK1Q99986 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.71□□□□□ -2.14
VRK1Q99986 snoU13.23-201ENST00000458863 104 ntBASIC1.71□□□□□ -2.14
VRK1Q99986 RNU6-922P-201ENST00000516753 99 ntBASIC1.71□□□□□ -2.14
VRK1Q99986 MIR4764-201ENST00000580680 88 ntBASIC1.71□□□□□ -2.14
VRK1Q99986 MIR4769-201ENST00000584126 77 ntBASIC1.71□□□□□ -2.14
VRK1Q99986 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
VRK1Q99986 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.7□□□□□ -2.14
VRK1Q99986 SNORA24-201ENST00000384096 131 ntBASIC1.7□□□□□ -2.14
VRK1Q99986 RNU6-187P-201ENST00000384139 106 ntBASIC1.7□□□□□ -2.14
VRK1Q99986 Y_RNA.494-201ENST00000384432 111 ntBASIC1.7□□□□□ -2.14
VRK1Q99986 MIR520C-201ENST00000385005 87 ntBASIC1.7□□□□□ -2.14
VRK1Q99986 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
VRK1Q99986 MTATP6P21-201ENST00000440681 189 ntBASIC1.7□□□□□ -2.14
VRK1Q99986 RNU7-80P-201ENST00000459562 61 ntBASIC1.7□□□□□ -2.14
VRK1Q99986 RPS29P24-201ENST00000486345 171 ntBASIC1.7□□□□□ -2.14
VRK1Q99986 RNU6-1149P-201ENST00000516810 97 ntBASIC1.7□□□□□ -2.14
VRK1Q99986 RNU6-295P-201ENST00000516901 104 ntBASIC1.7□□□□□ -2.14
VRK1Q99986 AC090821.2-201ENST00000523552 176 ntBASIC1.7□□□□□ -2.14
VRK1Q99986 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VRK1Q99986 SNORA70.7-201ENST00000384159 133 ntBASIC1.69□□□□□ -2.14
VRK1Q99986 MIR764-201ENST00000390811 85 ntBASIC1.69□□□□□ -2.14
VRK1Q99986 RNU7-96P-201ENST00000459535 64 ntBASIC1.69□□□□□ -2.14
VRK1Q99986 RPL30P7-201ENST00000479312 323 ntBASIC1.69□□□□□ -2.14
VRK1Q99986 RNA5SP445-201ENST00000515889 115 ntBASIC1.69□□□□□ -2.14
VRK1Q99986 RNU6-426P-201ENST00000516464 97 ntBASIC1.69□□□□□ -2.14
VRK1Q99986 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.69□□□□□ -2.14
VRK1Q99986 MTND5P32-201ENST00000560711 1802 ntBASIC1.68□□□□□ -2.14
VRK1Q99986 AC010332.2-201ENST00000613083 1904 ntBASIC1.68□□□□□ -2.14
VRK1Q99986 RNU6-704P-201ENST00000364162 103 ntBASIC1.68□□□□□ -2.14
VRK1Q99986 Y_RNA.351-201ENST00000365436 96 ntBASIC1.68□□□□□ -2.14
VRK1Q99986 SNORD18B-201ENST00000365659 72 ntBASIC1.68□□□□□ -2.14
VRK1Q99986 Y_RNA.454-201ENST00000384224 113 ntBASIC1.68□□□□□ -2.14
VRK1Q99986 RNU6-998P-201ENST00000515894 101 ntBASIC1.68□□□□□ -2.14
VRK1Q99986 RNA5SP236-201ENST00000516169 116 ntBASIC1.68□□□□□ -2.14
VRK1Q99986 AC019176.1-201ENST00000518519 225 ntBASIC1.68□□□□□ -2.14
VRK1Q99986 MIR3937-201ENST00000580135 106 ntBASIC1.68□□□□□ -2.14
VRK1Q99986 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VRK1Q99986 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
VRK1Q99986 Y_RNA.420-201ENST00000384043 110 ntBASIC1.67□□□□□ -2.14
VRK1Q99986 RNU6-460P-201ENST00000391158 108 ntBASIC1.67□□□□□ -2.14
VRK1Q99986 AL603914.1-201ENST00000401964 204 ntBASIC1.67□□□□□ -2.14
VRK1Q99986 AL035398.1-201ENST00000430869 322 ntBASIC1.67□□□□□ -2.14
VRK1Q99986 RNU6-237P-201ENST00000515985 71 ntBASIC1.67□□□□□ -2.14
VRK1Q99986 RNU2-60P-201ENST00000517290 128 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms