Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 SNORD51.1-201ENST00000365405 77 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 AC090615.1-201ENST00000577519 154 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 RMST_10.1-201ENST00000616309 154 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 AC137590.2-201ENST00000619709 240 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 MIR6888-201ENST00000621977 67 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 SNORA1.2-201ENST00000365189 134 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 SNORA72.6-201ENST00000384520 129 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 MIR599-201ENST00000385069 95 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 AL590084.2-201ENST00000401481 382 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 RNU6-77P-201ENST00000410554 91 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 BX295541.1-201ENST00000417774 250 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 EEF1E1P1-201ENST00000446998 430 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 MTCO3P39-201ENST00000514812 518 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 AC022441.3-201ENST00000605737 136 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 snoZ196.1-201ENST00000625269 89 ntBASIC-1.39□□□□□ -2.63
COL12A1Q99715 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.4□□□□□ -2.63
COL12A1Q99715 AL359634.1-202ENST00000404721 284 ntBASIC-1.4□□□□□ -2.63
COL12A1Q99715 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.4□□□□□ -2.63
COL12A1Q99715 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.4□□□□□ -2.63
COL12A1Q99715 RNU6-221P-201ENST00000459541 99 ntBASIC-1.4□□□□□ -2.63
COL12A1Q99715 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.4□□□□□ -2.63
COL12A1Q99715 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
COL12A1Q99715 RNU6-560P-201ENST00000364007 108 ntBASIC-1.4□□□□□ -2.63
COL12A1Q99715 RNU6-978P-201ENST00000364371 103 ntBASIC-1.4□□□□□ -2.63
COL12A1Q99715 RNU4-75P-201ENST00000364621 146 ntBASIC-1.4□□□□□ -2.63
COL12A1Q99715 AC113618.1-201ENST00000416747 285 ntBASIC-1.4□□□□□ -2.63
COL12A1Q99715 AC093423.1-201ENST00000440817 142 ntBASIC-1.4□□□□□ -2.63
COL12A1Q99715 RNU6-437P-201ENST00000459408 95 ntBASIC-1.4□□□□□ -2.63
COL12A1Q99715 RNU6-345P-201ENST00000517001 107 ntBASIC-1.4□□□□□ -2.63
COL12A1Q99715 AL358944.1-201ENST00000528537 144 ntBASIC-1.4□□□□□ -2.63
COL12A1Q99715 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.4□□□□□ -2.63
COL12A1Q99715 SNORD114-4-201ENST00000363962 75 ntBASIC-1.41□□□□□ -2.63
COL12A1Q99715 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.41□□□□□ -2.63
COL12A1Q99715 SUMO1P1-201ENST00000497904 306 ntBASIC-1.41□□□□□ -2.63
COL12A1Q99715 RNU6-341P-201ENST00000516973 96 ntBASIC-1.41□□□□□ -2.63
COL12A1Q99715 RNU6-114P-201ENST00000384704 105 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 RPL35AP4-201ENST00000412007 102 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 AC022616.6-201ENST00000520479 119 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 MTND3P13-201ENST00000574391 343 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 AC091948.2-201ENST00000636510 279 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 SNORD115-14-201ENST00000363090 81 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 RNU6-774P-201ENST00000363238 107 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 RNU6-359P-201ENST00000365466 108 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 SNORD73A-201ENST00000386062 65 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 MTCO1P57-201ENST00000432182 261 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 MIR4460-201ENST00000577862 86 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 AP001282.2-201ENST00000616149 309 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 TPTEP1-208ENST00000636884 213 ntBASIC-1.41□□□□□ -2.64
COL12A1Q99715 RNU6-102P-201ENST00000384485 104 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 MIR586-201ENST00000385035 97 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 RNU6-847P-201ENST00000411115 108 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 RPL30P16-201ENST00000419341 429 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 AC244670.1-201ENST00000436879 112 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 AC091951.2-201ENST00000500762 203 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 RNU6-454P-201ENST00000364292 107 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 AC087883.1-201ENST00000551882 391 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 MIR4791-201ENST00000607666 84 ntBASIC-1.42□□□□□ -2.64
COL12A1Q99715 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 RNU6-376P-201ENST00000384731 106 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 RNA5SP454-201ENST00000517231 127 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-1.43□□□□□ -2.64
COL12A1Q99715 MIR4637-201ENST00000582405 84 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 AL359920.1-201ENST00000618332 176 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 SNORD115-29-201ENST00000362834 82 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 SNORD115-11-201ENST00000363616 82 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 SNORD115-22-201ENST00000364456 82 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 SNORD115-43-201ENST00000365503 82 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 SNORD115-36-201ENST00000365629 82 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 MIR626-201ENST00000385032 94 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 AC010975.2-201ENST00000427781 588 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.43□□□□□ -2.64
COL12A1Q99715 RPL39P36-201ENST00000490784 156 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-1.43□□□□□ -2.64
COL12A1Q99715 AC096586.1-201ENST00000610267 561 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 RNU6-384P-201ENST00000364900 104 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 RNU6-608P-201ENST00000383927 104 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 Y_RNA.687-201ENST00000516558 91 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 RNA5SP449-201ENST00000516871 130 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 RNA5SP135-201ENST00000517019 125 ntBASIC-1.43□□□□□ -2.64
COL12A1Q99715 RNA5SP403-201ENST00000363598 108 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 RNU6-324P-201ENST00000363957 106 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 RNU6-449P-201ENST00000383914 107 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 RPL39P6-201ENST00000448289 150 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.44□□□□□ -2.64
COL12A1Q99715 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 RNU6-1315P-201ENST00000517187 99 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 MIR23C-201ENST00000579846 100 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 MIR548H5-201ENST00000580314 60 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 Y_RNA.534-201ENST00000384599 112 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms