Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 Y_RNA.542-201ENST00000384641 111 ntBASIC1.09□□□□□ -2.23
GFI1Q99684 MIR548A2-201ENST00000384956 97 ntBASIC1.09□□□□□ -2.23
GFI1Q99684 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.09□□□□□ -2.23
GFI1Q99684 RNU6-955P-201ENST00000410497 104 ntBASIC1.09□□□□□ -2.23
GFI1Q99684 RNU7-40P-201ENST00000516397 64 ntBASIC1.09□□□□□ -2.23
GFI1Q99684 AP003716.2-201ENST00000528260 108 ntBASIC1.09□□□□□ -2.23
GFI1Q99684 MIR4308-201ENST00000580634 81 ntBASIC1.09□□□□□ -2.23
GFI1Q99684 AP000942.4-201ENST00000604811 241 ntBASIC1.09□□□□□ -2.23
GFI1Q99684 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.08□□□□□ -2.24
GFI1Q99684 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
GFI1Q99684 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
GFI1Q99684 RNU6-1189P-201ENST00000383958 107 ntBASIC1.08□□□□□ -2.24
GFI1Q99684 MIR570-201ENST00000384917 97 ntBASIC1.08□□□□□ -2.24
GFI1Q99684 MIR150-201ENST00000385048 84 ntBASIC1.08□□□□□ -2.24
GFI1Q99684 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.08□□□□□ -2.24
GFI1Q99684 snoU13.25-201ENST00000458945 104 ntBASIC1.08□□□□□ -2.24
GFI1Q99684 RNU7-67P-201ENST00000459003 62 ntBASIC1.08□□□□□ -2.24
GFI1Q99684 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
GFI1Q99684 RPS26P48-201ENST00000491713 339 ntBASIC1.08□□□□□ -2.24
GFI1Q99684 RNU6-561P-201ENST00000516222 102 ntBASIC1.08□□□□□ -2.24
GFI1Q99684 SNORD116-25-201ENST00000516517 92 ntBASIC1.08□□□□□ -2.24
GFI1Q99684 SNORA25.3-201ENST00000363205 127 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 RNU6-275P-201ENST00000364910 107 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 SNORA27-201ENST00000384323 126 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 AF228730.3-201ENST00000436691 102 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 AC009474.2-201ENST00000451383 136 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 snoU13.16-201ENST00000459350 104 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 RNU7-21P-201ENST00000459430 62 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 MIR378D2-201ENST00000580636 98 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 MIR4303-201ENST00000581299 66 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 MIR3660-201ENST00000584845 100 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 MTND1P7-201ENST00000632801 297 ntBASIC1.07□□□□□ -2.24
GFI1Q99684 Y_RNA.75-201ENST00000362927 97 ntBASIC1.06□□□□□ -2.24
GFI1Q99684 RNA5SP126-201ENST00000365092 109 ntBASIC1.06□□□□□ -2.24
GFI1Q99684 Y_RNA.363-201ENST00000365529 113 ntBASIC1.06□□□□□ -2.24
GFI1Q99684 SNORA24-201ENST00000384096 131 ntBASIC1.06□□□□□ -2.24
GFI1Q99684 SNORA40.6-201ENST00000391153 128 ntBASIC1.06□□□□□ -2.24
GFI1Q99684 RNU6-918P-201ENST00000391219 106 ntBASIC1.06□□□□□ -2.24
GFI1Q99684 RNU7-53P-201ENST00000516705 60 ntBASIC1.06□□□□□ -2.24
GFI1Q99684 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
GFI1Q99684 AC130289.1-201ENST00000577321 73 ntBASIC1.06□□□□□ -2.24
GFI1Q99684 SEPT14P17-201ENST00000617978 177 ntBASIC1.06□□□□□ -2.24
GFI1Q99684 Y_RNA.23-201ENST00000362496 106 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 RNU6-396P-201ENST00000365369 105 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 RNU6-1292P-201ENST00000383856 107 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 RNU6-643P-201ENST00000384018 107 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 MIR1185-1-201ENST00000408598 86 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 RNU6-938P-201ENST00000411285 103 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.05□□□□□ -2.24
GFI1Q99684 AL138752.1-201ENST00000452964 351 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 RPS29P24-201ENST00000486345 171 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.05□□□□□ -2.24
GFI1Q99684 SNORA18.4-201ENST00000516440 124 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 MIR2115-201ENST00000516657 100 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.05□□□□□ -2.24
GFI1Q99684 MRPS18CP4-201ENST00000535821 231 ntBASIC1.05□□□□□ -2.24
GFI1Q99684 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
GFI1Q99684 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
GFI1Q99684 AC008163.1-202ENST00000636004 2889 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
GFI1Q99684 Y_RNA.297-201ENST00000364950 91 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 SNORA75.2-201ENST00000391138 150 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 SNORA75.3-201ENST00000391231 150 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 MIR1285-1-201ENST00000408593 84 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 AC002429.1-201ENST00000437672 148 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 AL392103.1-201ENST00000447000 198 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 RNU7-96P-201ENST00000459535 64 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 RN7SKP179-201ENST00000516126 217 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 SNORD36C-201ENST00000516733 66 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 RNU6-958P-201ENST00000516995 106 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 RNU6-388P-201ENST00000517012 105 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 RNU6-389P-201ENST00000517048 105 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 AL365205.2-201ENST00000594586 68 ntBASIC1.04□□□□□ -2.24
GFI1Q99684 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
GFI1Q99684 RNU6-312P-201ENST00000364629 107 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 Y_RNA.330-201ENST00000365230 109 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 MIR1289-2-201ENST00000408360 111 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 AL035398.1-201ENST00000430869 322 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 RNU7-73P-201ENST00000458743 63 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 Y_RNA.644-201ENST00000459006 113 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 Y_RNA.674-201ENST00000516362 113 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 Y_RNA.700-201ENST00000516806 100 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 MIR3129-201ENST00000581095 76 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 AC072026.1-201ENST00000605023 201 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 AC078938.1-201ENST00000620993 318 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 U6.106-201ENST00000636360 105 ntBASIC1.03□□□□□ -2.24
GFI1Q99684 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
GFI1Q99684 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
GFI1Q99684 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
GFI1Q99684 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
GFI1Q99684 RNU6-200P-201ENST00000364743 107 ntBASIC1.02□□□□□ -2.25
GFI1Q99684 Y_RNA.412-201ENST00000384001 104 ntBASIC1.02□□□□□ -2.25
GFI1Q99684 SNORA1-201ENST00000384107 130 ntBASIC1.02□□□□□ -2.25
GFI1Q99684 Y_RNA.440-201ENST00000384120 114 ntBASIC1.02□□□□□ -2.25
GFI1Q99684 Y_RNA.494-201ENST00000384432 111 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms