Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC138305.3-201ENST00000624988 240 ntBASIC-0.3□□□□□ -2.46
VAT1Q99536 MIR499B-201ENST00000636498 73 ntBASIC-0.3□□□□□ -2.46
VAT1Q99536 SNORD115-28-201ENST00000363931 81 ntBASIC-0.31□□□□□ -2.46
VAT1Q99536 RNU6-801P-201ENST00000364087 105 ntBASIC-0.31□□□□□ -2.46
VAT1Q99536 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.31□□□□□ -2.46
VAT1Q99536 MIR628-201ENST00000385229 95 ntBASIC-0.31□□□□□ -2.46
VAT1Q99536 RNU7-149P-201ENST00000516739 59 ntBASIC-0.31□□□□□ -2.46
VAT1Q99536 RNU6-782P-201ENST00000516852 104 ntBASIC-0.31□□□□□ -2.46
VAT1Q99536 MIR6779-201ENST00000617283 64 ntBASIC-0.31□□□□□ -2.46
VAT1Q99536 MIR1295B-201ENST00000636144 60 ntBASIC-0.31□□□□□ -2.46
VAT1Q99536 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.32□□□□□ -2.46
VAT1Q99536 SNORA72.4-201ENST00000384174 132 ntBASIC-0.32□□□□□ -2.46
VAT1Q99536 SNORA27-201ENST00000384323 126 ntBASIC-0.32□□□□□ -2.46
VAT1Q99536 RNU6-310P-201ENST00000384655 107 ntBASIC-0.32□□□□□ -2.46
VAT1Q99536 RPL39P34-201ENST00000477141 156 ntBASIC-0.32□□□□□ -2.46
VAT1Q99536 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.32□□□□□ -2.46
VAT1Q99536 RNU6-504P-201ENST00000516568 104 ntBASIC-0.32□□□□□ -2.46
VAT1Q99536 RNA5SP47-201ENST00000517230 109 ntBASIC-0.32□□□□□ -2.46
VAT1Q99536 AC131281.1-201ENST00000522984 164 ntBASIC-0.32□□□□□ -2.46
VAT1Q99536 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.33□□□□□ -2.46
VAT1Q99536 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.33□□□□□ -2.46
VAT1Q99536 PDCL2P1-201ENST00000419302 352 ntBASIC-0.33□□□□□ -2.46
VAT1Q99536 AC096644.2-201ENST00000429278 159 ntBASIC-0.33□□□□□ -2.46
VAT1Q99536 RPS29P24-201ENST00000486345 171 ntBASIC-0.33□□□□□ -2.46
VAT1Q99536 SNORA31.14-201ENST00000516728 116 ntBASIC-0.33□□□□□ -2.46
VAT1Q99536 MIR4752-201ENST00000579672 72 ntBASIC-0.33□□□□□ -2.46
VAT1Q99536 AC091304.10-201ENST00000641554 121 ntBASIC-0.33□□□□□ -2.46
VAT1Q99536 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 RNU6-161P-201ENST00000363051 106 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 SNORD116-2-201ENST00000384274 95 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 SNORD116-6-201ENST00000384711 96 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 MIR329-2-201ENST00000385029 84 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 MIR214-201ENST00000385214 110 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 AC023449.1-201ENST00000454464 154 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 RNU7-165P-201ENST00000458864 60 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 TRBVB-201ENST00000477100 408 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 RNU7-110P-201ENST00000516891 62 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 AC010205.1-201ENST00000616668 449 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 U4.5-201ENST00000617137 123 ntBASIC-0.34□□□□□ -2.46
VAT1Q99536 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.35□□□□□ -2.47
VAT1Q99536 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.35□□□□□ -2.47
VAT1Q99536 RNU6-890P-201ENST00000384121 107 ntBASIC-0.35□□□□□ -2.47
VAT1Q99536 SNORD28-201ENST00000384706 75 ntBASIC-0.35□□□□□ -2.47
VAT1Q99536 MIR892B-201ENST00000401279 77 ntBASIC-0.35□□□□□ -2.47
VAT1Q99536 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.35□□□□□ -2.47
VAT1Q99536 POLR2KP2-201ENST00000438155 177 ntBASIC-0.35□□□□□ -2.47
VAT1Q99536 RNU7-159P-201ENST00000459284 62 ntBASIC-0.35□□□□□ -2.47
VAT1Q99536 RNU7-30P-201ENST00000516835 62 ntBASIC-0.35□□□□□ -2.47
VAT1Q99536 AC011373.1-201ENST00000607270 237 ntBASIC-0.35□□□□□ -2.47
VAT1Q99536 AC048344.4-201ENST00000619744 527 ntBASIC-0.35□□□□□ -2.47
VAT1Q99536 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 RNU4-24P-201ENST00000364565 139 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 RNU6-269P-201ENST00000391077 97 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 RNU6-370P-201ENST00000411008 104 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.36□□□□□ -2.47
VAT1Q99536 AC010655.3-201ENST00000478818 450 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 RNU6-135P-201ENST00000516769 101 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.36□□□□□ -2.47
VAT1Q99536 MIR3152-201ENST00000579801 74 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 AC124312.5-201ENST00000604451 268 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 AC122108.2-201ENST00000611946 526 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 AP001282.2-201ENST00000616149 309 ntBASIC-0.36□□□□□ -2.47
VAT1Q99536 RNU6-403P-201ENST00000363163 104 ntBASIC-0.37□□□□□ -2.47
VAT1Q99536 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.37□□□□□ -2.47
VAT1Q99536 MIR548I3-201ENST00000408378 149 ntBASIC-0.37□□□□□ -2.47
VAT1Q99536 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.37□□□□□ -2.47
VAT1Q99536 MTND4P17-201ENST00000470444 350 ntBASIC-0.37□□□□□ -2.47
VAT1Q99536 SNORD36C-201ENST00000516733 66 ntBASIC-0.37□□□□□ -2.47
VAT1Q99536 AL021707.8-201ENST00000609428 183 ntBASIC-0.37□□□□□ -2.47
VAT1Q99536 MIR6082-201ENST00000613604 109 ntBASIC-0.37□□□□□ -2.47
VAT1Q99536 AC002553.4-201ENST00000616896 331 ntBASIC-0.37□□□□□ -2.47
VAT1Q99536 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.37□□□□□ -2.47
VAT1Q99536 RNA5SP257-201ENST00000363023 116 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 RNU4-80P-201ENST00000363200 141 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 RNU6-308P-201ENST00000390957 107 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 SNORD77.3-201ENST00000391113 65 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 RNU4-30P-201ENST00000410245 143 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 AL138752.1-201ENST00000452964 351 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 SNORD4A-201ENST00000459174 72 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 RNU2-11P-201ENST00000459191 187 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 AC104692.1-201ENST00000472406 90 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 AC138869.1-201ENST00000568623 124 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 MIR5690-201ENST00000583739 73 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 MIR4639-201ENST00000584938 69 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 VN1R91P-201ENST00000594377 169 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 AL049861.1-201ENST00000603130 150 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.38□□□□□ -2.47
VAT1Q99536 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.39□□□□□ -2.47
VAT1Q99536 MIR7-2-201ENST00000384970 110 ntBASIC-0.39□□□□□ -2.47
VAT1Q99536 MIR501-201ENST00000390204 84 ntBASIC-0.39□□□□□ -2.47
VAT1Q99536 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.39□□□□□ -2.47
VAT1Q99536 RPL39P25-201ENST00000449384 154 ntBASIC-0.39□□□□□ -2.47
VAT1Q99536 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.39□□□□□ -2.47
VAT1Q99536 RNU6-693P-201ENST00000516134 107 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms