Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.3□□□□□ -1.88
PHOX2BQ99453 RNA5SP42-201ENST00000364278 115 ntBASIC3.29□□□□□ -1.88
PHOX2BQ99453 SNORD58A-201ENST00000383875 65 ntBASIC3.29□□□□□ -1.88
PHOX2BQ99453 Y_RNA.467-201ENST00000384297 102 ntBASIC3.29□□□□□ -1.88
PHOX2BQ99453 RNU6-913P-201ENST00000390913 95 ntBASIC3.29□□□□□ -1.88
PHOX2BQ99453 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.29□□□□□ -1.88
PHOX2BQ99453 MIR1270-201ENST00000459320 83 ntBASIC3.29□□□□□ -1.88
PHOX2BQ99453 RNU7-43P-201ENST00000516554 64 ntBASIC3.29□□□□□ -1.88
PHOX2BQ99453 MIR5588-201ENST00000581890 63 ntBASIC3.29□□□□□ -1.88
PHOX2BQ99453 ELOCP29-201ENST00000588193 334 ntBASIC3.29□□□□□ -1.88
PHOX2BQ99453 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.29□□□□□ -1.88
PHOX2BQ99453 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.29□□□□□ -1.88
PHOX2BQ99453 SNORA50A-202ENST00000629536 136 ntBASIC3.29□□□□□ -1.88
PHOX2BQ99453 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
PHOX2BQ99453 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PHOX2BQ99453 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PHOX2BQ99453 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHOX2BQ99453 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHOX2BQ99453 RNU6-979P-201ENST00000383896 107 ntBASIC3.28□□□□□ -1.88
PHOX2BQ99453 MIR764-201ENST00000390811 85 ntBASIC3.28□□□□□ -1.88
PHOX2BQ99453 MIR1255A-201ENST00000408338 113 ntBASIC3.28□□□□□ -1.88
PHOX2BQ99453 AL445685.2-201ENST00000422551 342 ntBASIC3.28□□□□□ -1.88
PHOX2BQ99453 AC006989.1-201ENST00000427212 131 ntBASIC3.28□□□□□ -1.88
PHOX2BQ99453 AL139132.1-201ENST00000431587 344 ntBASIC3.28□□□□□ -1.88
PHOX2BQ99453 RPL23AP6-201ENST00000446637 472 ntBASIC3.28□□□□□ -1.88
PHOX2BQ99453 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.28□□□□□ -1.88
PHOX2BQ99453 SNORA74.3-201ENST00000517108 154 ntBASIC3.28□□□□□ -1.88
PHOX2BQ99453 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.28□□□□□ -1.88
PHOX2BQ99453 MIR30E-201ENST00000362104 92 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 MIR424-201ENST00000362227 98 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 U8.15-201ENST00000390947 134 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 SNORD28B-201ENST00000390993 75 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNU6-447P-201ENST00000410293 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNU6-1118P-201ENST00000410382 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNU6-1076P-201ENST00000410397 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNU6-355P-201ENST00000410427 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNU6-791P-201ENST00000410467 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNU6-705P-201ENST00000410601 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNU6-1100P-201ENST00000410691 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNU6-860P-201ENST00000410860 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNU6-1217P-201ENST00000411276 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNU6-785P-201ENST00000411324 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 snoU13.15-201ENST00000459407 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 AC092185.1-201ENST00000491371 97 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNVU1-2-201ENST00000516326 135 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 RNA5SP395-201ENST00000516567 118 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 UBL5P2-201ENST00000583788 219 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 U6.90-201ENST00000614007 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 U6.70-201ENST00000620287 104 ntBASIC3.27□□□□□ -1.89
PHOX2BQ99453 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.27□□□□□ -1.89
PHOX2BQ99453 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.27□□□□□ -1.89
PHOX2BQ99453 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.27□□□□□ -1.89
PHOX2BQ99453 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PHOX2BQ99453 Y_RNA.164-201ENST00000363709 102 ntBASIC3.26□□□□□ -1.89
PHOX2BQ99453 AC090844.1-201ENST00000422019 156 ntBASIC3.26□□□□□ -1.89
PHOX2BQ99453 AC105272.1-201ENST00000438604 198 ntBASIC3.26□□□□□ -1.89
PHOX2BQ99453 AC245047.7-201ENST00000440265 293 ntBASIC3.26□□□□□ -1.89
PHOX2BQ99453 RNU7-171P-201ENST00000459581 62 ntBASIC3.26□□□□□ -1.89
PHOX2BQ99453 RNA5SP437-201ENST00000517249 129 ntBASIC3.26□□□□□ -1.89
PHOX2BQ99453 MIR8055-201ENST00000610739 97 ntBASIC3.26□□□□□ -1.89
PHOX2BQ99453 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.26□□□□□ -1.89
PHOX2BQ99453 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.26□□□□□ -1.89
PHOX2BQ99453 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PHOX2BQ99453 RNU6-112P-201ENST00000363599 104 ntBASIC3.25□□□□□ -1.89
PHOX2BQ99453 MIR526A1-201ENST00000384897 85 ntBASIC3.25□□□□□ -1.89
PHOX2BQ99453 AL023284.1-201ENST00000403956 276 ntBASIC3.25□□□□□ -1.89
PHOX2BQ99453 RNU6-1190P-201ENST00000410811 104 ntBASIC3.25□□□□□ -1.89
PHOX2BQ99453 snoU13.23-201ENST00000458863 104 ntBASIC3.25□□□□□ -1.89
PHOX2BQ99453 RNU7-35P-201ENST00000517174 62 ntBASIC3.25□□□□□ -1.89
PHOX2BQ99453 AC015712.3-201ENST00000559380 164 ntBASIC3.25□□□□□ -1.89
PHOX2BQ99453 MIR4666B-201ENST00000578142 81 ntBASIC3.25□□□□□ -1.89
PHOX2BQ99453 MIR4668-201ENST00000582284 70 ntBASIC3.25□□□□□ -1.89
PHOX2BQ99453 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
PHOX2BQ99453 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.24□□□□□ -1.89
PHOX2BQ99453 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHOX2BQ99453 Y_RNA.73-201ENST00000362910 113 ntBASIC3.24□□□□□ -1.89
PHOX2BQ99453 Y_RNA.140-201ENST00000363474 103 ntBASIC3.24□□□□□ -1.89
PHOX2BQ99453 RNU6-219P-201ENST00000364728 107 ntBASIC3.24□□□□□ -1.89
PHOX2BQ99453 SNORD38.2-201ENST00000384470 69 ntBASIC3.24□□□□□ -1.89
PHOX2BQ99453 RNU6-296P-201ENST00000384608 107 ntBASIC3.24□□□□□ -1.89
PHOX2BQ99453 HMGN2P39-201ENST00000398005 273 ntBASIC3.24□□□□□ -1.89
PHOX2BQ99453 Y_RNA.620-201ENST00000411009 88 ntBASIC3.24□□□□□ -1.89
PHOX2BQ99453 RPS29P28-201ENST00000446439 141 ntBASIC3.24□□□□□ -1.89
PHOX2BQ99453 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.24□□□□□ -1.89
PHOX2BQ99453 FAM106DP-201ENST00000586416 501 ntBASIC3.24□□□□□ -1.89
PHOX2BQ99453 MIR376B-201ENST00000614515 100 ntBASIC3.24□□□□□ -1.89
PHOX2BQ99453 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHOX2BQ99453 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PHOX2BQ99453 RNU6-279P-201ENST00000391297 101 ntBASIC3.23□□□□□ -1.89
PHOX2BQ99453 UBBP3-201ENST00000445497 241 ntBASIC3.23□□□□□ -1.89
PHOX2BQ99453 RNU6-548P-201ENST00000517083 115 ntBASIC3.23□□□□□ -1.89
PHOX2BQ99453 Z97988.1-201ENST00000637697 135 ntBASIC3.23□□□□□ -1.89
PHOX2BQ99453 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PHOX2BQ99453 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PHOX2BQ99453 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PHOX2BQ99453 RNA5SP99-201ENST00000364020 114 ntBASIC3.22□□□□□ -1.89
PHOX2BQ99453 RNU6-865P-201ENST00000364772 107 ntBASIC3.22□□□□□ -1.89
PHOX2BQ99453 MIR206-201ENST00000384872 86 ntBASIC3.22□□□□□ -1.89
PHOX2BQ99453 RNA5SP225-201ENST00000410874 135 ntBASIC3.22□□□□□ -1.89
PHOX2BQ99453 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms