Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AL096861.1-201ENST00000610899 123 ntBASIC1.36□□□□□ -2.19
SIN3AQ96ST3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.36□□□□□ -2.19
SIN3AQ96ST3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.634-201ENST00000364811 113 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 SNORD114-22-201ENST00000365423 72 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 RNU6-47P-201ENST00000383866 107 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.432-201ENST00000384087 111 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.552-201ENST00000384665 112 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 SNORD28B-201ENST00000390993 75 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
SIN3AQ96ST3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.35□□□□□ -2.19
SIN3AQ96ST3 RN7SKP88-201ENST00000516847 250 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 AC108706.1-201ENST00000611053 297 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 7SK.8-201ENST00000612110 250 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 7SK.11-201ENST00000615477 250 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 7SK.13-201ENST00000622040 250 ntBASIC1.35□□□□□ -2.19
SIN3AQ96ST3 Y_RNA.121-201ENST00000363309 113 ntBASIC1.34□□□□□ -2.19
SIN3AQ96ST3 SNORD24-201ENST00000383884 75 ntBASIC1.34□□□□□ -2.19
SIN3AQ96ST3 SNORD61-201ENST00000384252 73 ntBASIC1.34□□□□□ -2.19
SIN3AQ96ST3 MIR518F-201ENST00000384973 87 ntBASIC1.34□□□□□ -2.19
SIN3AQ96ST3 RNU6-578P-201ENST00000390980 103 ntBASIC1.34□□□□□ -2.19
SIN3AQ96ST3 snoU13.25-201ENST00000458945 104 ntBASIC1.34□□□□□ -2.19
SIN3AQ96ST3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.34□□□□□ -2.19
SIN3AQ96ST3 RNA5SP153-201ENST00000516498 76 ntBASIC1.34□□□□□ -2.19
SIN3AQ96ST3 RNU6-126P-201ENST00000516685 103 ntBASIC1.34□□□□□ -2.19
SIN3AQ96ST3 AC109810.1-201ENST00000534066 224 ntBASIC1.34□□□□□ -2.19
SIN3AQ96ST3 MIR548AR-201ENST00000582191 57 ntBASIC1.34□□□□□ -2.19
SIN3AQ96ST3 MIR3192-201ENST00000584920 77 ntBASIC1.34□□□□□ -2.19
SIN3AQ96ST3 RNU6-888P-201ENST00000363010 101 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 SNORA25.9-201ENST00000365087 128 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 RNU6-728P-201ENST00000365375 104 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.435-201ENST00000384095 112 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.515-201ENST00000384535 112 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 U8.17-201ENST00000391292 132 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 RNU4-43P-201ENST00000410628 137 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.33□□□□□ -2.2
SIN3AQ96ST3 RNU7-41P-201ENST00000515917 61 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 RNU6-947P-201ENST00000516264 106 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 RNU6-197P-201ENST00000516680 100 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 RNU6-365P-201ENST00000517113 106 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 RNU7-181P-201ENST00000517234 74 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 MIR4764-201ENST00000580680 88 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 Z83818.1-201ENST00000603584 150 ntBASIC1.33□□□□□ -2.2
SIN3AQ96ST3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SIN3AQ96ST3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.297-201ENST00000364950 91 ntBASIC1.32□□□□□ -2.2
SIN3AQ96ST3 RNU2-70P-201ENST00000410718 179 ntBASIC1.32□□□□□ -2.2
SIN3AQ96ST3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.32□□□□□ -2.2
SIN3AQ96ST3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.32□□□□□ -2.2
SIN3AQ96ST3 RNU6-138P-201ENST00000515952 107 ntBASIC1.32□□□□□ -2.2
SIN3AQ96ST3 RNU7-43P-201ENST00000516554 64 ntBASIC1.32□□□□□ -2.2
SIN3AQ96ST3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.31□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.182-201ENST00000363880 111 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.257-201ENST00000364596 102 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 RNU6-200P-201ENST00000364743 107 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.412-201ENST00000384001 104 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 RNU4-70P-201ENST00000384579 139 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 MIR520C-201ENST00000385005 87 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 SNORA26-201ENST00000391286 122 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.797-201ENST00000515977 94 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 RNU6-693P-201ENST00000516134 107 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 RNU6-1270P-201ENST00000517128 108 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 AC103810.9-201ENST00000606688 112 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.31□□□□□ -2.2
SIN3AQ96ST3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.31□□□□□ -2.2
SIN3AQ96ST3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.31□□□□□ -2.2
SIN3AQ96ST3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
SIN3AQ96ST3 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.23-201ENST00000362496 106 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 RNU6-1020P-201ENST00000363684 107 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 RNU6-275P-201ENST00000364910 107 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 MIR520E-201ENST00000384867 87 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 MIR532-201ENST00000385025 91 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 AL121914.1-201ENST00000450188 156 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.644-201ENST00000459006 113 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 AC048334.1-201ENST00000477975 159 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.674-201ENST00000516362 113 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 RNU6-504P-201ENST00000516568 104 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 AC022559.1-201ENST00000520905 205 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 U6.106-201ENST00000636360 105 ntBASIC1.3□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.75-201ENST00000362927 97 ntBASIC1.29□□□□□ -2.2
SIN3AQ96ST3 SNORD115-28-201ENST00000363931 81 ntBASIC1.29□□□□□ -2.2
SIN3AQ96ST3 MIR570-201ENST00000384917 97 ntBASIC1.29□□□□□ -2.2
SIN3AQ96ST3 RNU6-938P-201ENST00000411285 103 ntBASIC1.29□□□□□ -2.2
SIN3AQ96ST3 RPL39P39-201ENST00000455840 151 ntBASIC1.29□□□□□ -2.2
SIN3AQ96ST3 AC008133.2-201ENST00000624540 351 ntBASIC1.29□□□□□ -2.2
SIN3AQ96ST3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.28□□□□□ -2.2
SIN3AQ96ST3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.28□□□□□ -2.2
SIN3AQ96ST3 AC245047.7-201ENST00000440265 293 ntBASIC1.28□□□□□ -2.2
SIN3AQ96ST3 RNU2-13P-201ENST00000515909 113 ntBASIC1.28□□□□□ -2.2
SIN3AQ96ST3 SNORA31.2-201ENST00000516019 134 ntBASIC1.28□□□□□ -2.2
SIN3AQ96ST3 RNU6-1219P-201ENST00000516143 112 ntBASIC1.28□□□□□ -2.2
SIN3AQ96ST3 RNU6-113P-201ENST00000516653 101 ntBASIC1.28□□□□□ -2.2
SIN3AQ96ST3 MIR6504-201ENST00000613520 61 ntBASIC1.28□□□□□ -2.2
SIN3AQ96ST3 MIR8065-201ENST00000620577 100 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms