Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 AC078899.2-201ENST00000595282 212 ntBASIC1.91□□□□□ -2.1
PTCD3Q96EY7 ICE2P2-201ENST00000483823 2787 ntBASIC1.9□□□□□ -2.1
PTCD3Q96EY7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
PTCD3Q96EY7 Y_RNA.81-201ENST00000362997 102 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 SNORA2.2-201ENST00000365473 135 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 SNORD38C-201ENST00000384381 69 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 Y_RNA.494-201ENST00000384432 111 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 snoU13.27-201ENST00000459278 104 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 RNU7-34P-201ENST00000459394 64 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 RN7SKP19-201ENST00000516016 252 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 SNORA31.17-201ENST00000516953 127 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 AP003484.1-201ENST00000530974 250 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 AC133485.4-201ENST00000561835 220 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 AC138907.4-201ENST00000570107 226 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 MIR4709-201ENST00000577272 72 ntBASIC1.9□□□□□ -2.11
PTCD3Q96EY7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.9□□□□□ -2.11
PTCD3Q96EY7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PTCD3Q96EY7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PTCD3Q96EY7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.89□□□□□ -2.11
PTCD3Q96EY7 RNU6-1325P-201ENST00000364905 105 ntBASIC1.89□□□□□ -2.11
PTCD3Q96EY7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PTCD3Q96EY7 AC087499.4-201ENST00000448505 178 ntBASIC1.89□□□□□ -2.11
PTCD3Q96EY7 RNA5SP481-201ENST00000516814 122 ntBASIC1.89□□□□□ -2.11
PTCD3Q96EY7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.89□□□□□ -2.11
PTCD3Q96EY7 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
PTCD3Q96EY7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
PTCD3Q96EY7 RNU6-1064P-201ENST00000410626 104 ntBASIC1.88□□□□□ -2.11
PTCD3Q96EY7 RPS26P48-201ENST00000491713 339 ntBASIC1.88□□□□□ -2.11
PTCD3Q96EY7 SNORD33.1-201ENST00000516213 88 ntBASIC1.88□□□□□ -2.11
PTCD3Q96EY7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PTCD3Q96EY7 MIR4648-201ENST00000580107 72 ntBASIC1.88□□□□□ -2.11
PTCD3Q96EY7 AL513423.1-201ENST00000621695 132 ntBASIC1.88□□□□□ -2.11
PTCD3Q96EY7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PTCD3Q96EY7 RNU6-1056P-201ENST00000383996 107 ntBASIC1.87□□□□□ -2.11
PTCD3Q96EY7 RNU6-1144P-201ENST00000384247 104 ntBASIC1.87□□□□□ -2.11
PTCD3Q96EY7 RNU6-476P-201ENST00000384726 107 ntBASIC1.87□□□□□ -2.11
PTCD3Q96EY7 MIR516B2-201ENST00000385190 85 ntBASIC1.87□□□□□ -2.11
PTCD3Q96EY7 MIR660-201ENST00000385235 97 ntBASIC1.87□□□□□ -2.11
PTCD3Q96EY7 PGBD4P5-201ENST00000445958 426 ntBASIC1.87□□□□□ -2.11
PTCD3Q96EY7 snoU13.26-201ENST00000459452 105 ntBASIC1.87□□□□□ -2.11
PTCD3Q96EY7 SNORA31.4-201ENST00000516049 129 ntBASIC1.87□□□□□ -2.11
PTCD3Q96EY7 RNU6-113P-201ENST00000516653 101 ntBASIC1.87□□□□□ -2.11
PTCD3Q96EY7 AL627230.6-201ENST00000611129 280 ntBASIC1.87□□□□□ -2.11
PTCD3Q96EY7 U6.95-201ENST00000636931 70 ntBASIC1.87□□□□□ -2.11
PTCD3Q96EY7 RNU6-349P-201ENST00000362402 107 ntBASIC1.86□□□□□ -2.11
PTCD3Q96EY7 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
PTCD3Q96EY7 Y_RNA.366-201ENST00000365540 102 ntBASIC1.86□□□□□ -2.11
PTCD3Q96EY7 RNU6-44P-201ENST00000384045 107 ntBASIC1.86□□□□□ -2.11
PTCD3Q96EY7 MIR526A1-201ENST00000384897 85 ntBASIC1.86□□□□□ -2.11
PTCD3Q96EY7 AL035461.1-201ENST00000421490 332 ntBASIC1.86□□□□□ -2.11
PTCD3Q96EY7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.86□□□□□ -2.11
PTCD3Q96EY7 RNU7-181P-201ENST00000517234 74 ntBASIC1.86□□□□□ -2.11
PTCD3Q96EY7 MIR4778-201ENST00000577635 80 ntBASIC1.86□□□□□ -2.11
PTCD3Q96EY7 MIR6129-201ENST00000616087 109 ntBASIC1.86□□□□□ -2.11
PTCD3Q96EY7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
PTCD3Q96EY7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.85□□□□□ -2.11
PTCD3Q96EY7 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 Y_RNA.351-201ENST00000365436 96 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 RNU6-203P-201ENST00000384038 104 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 MIR504-201ENST00000385065 83 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 RNU6-360P-201ENST00000390944 104 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 U8.17-201ENST00000391292 132 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.85□□□□□ -2.11
PTCD3Q96EY7 RNU6-240P-201ENST00000516098 97 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 RNU6-919P-201ENST00000516731 104 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 SNORA18.7-201ENST00000516910 131 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 AC025166.1-201ENST00000612411 163 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 SNORD3E-202ENST00000627253 216 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.85□□□□□ -2.11
PTCD3Q96EY7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.85□□□□□ -2.11
PTCD3Q96EY7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PTCD3Q96EY7 SNORA27-201ENST00000384323 126 ntBASIC1.84□□□□□ -2.11
PTCD3Q96EY7 MIR452-201ENST00000385020 85 ntBASIC1.84□□□□□ -2.11
PTCD3Q96EY7 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
PTCD3Q96EY7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
PTCD3Q96EY7 AL137067.1-201ENST00000615933 120 ntBASIC1.84□□□□□ -2.11
PTCD3Q96EY7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.84□□□□□ -2.12
PTCD3Q96EY7 MTND5P18-201ENST00000445624 1801 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 RNU6-457P-201ENST00000363999 107 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 Y_RNA.241-201ENST00000364470 117 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 MIR194-1-201ENST00000384892 85 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 AL627390.1-201ENST00000396055 340 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 AC019129.1-201ENST00000403786 261 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 MIR1263-201ENST00000408324 86 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.83□□□□□ -2.12
PTCD3Q96EY7 snoU13.15-201ENST00000459407 104 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 MTND5P34-201ENST00000568888 325 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 HSPE1P19-201ENST00000603327 295 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 AC091932.4-201ENST00000623386 200 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 AC095038.3-201ENST00000634439 195 ntBASIC1.83□□□□□ -2.12
PTCD3Q96EY7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
PTCD3Q96EY7 SNORD115-34-201ENST00000362441 82 ntBASIC1.82□□□□□ -2.12
PTCD3Q96EY7 SNORD115-12-201ENST00000362583 82 ntBASIC1.82□□□□□ -2.12
PTCD3Q96EY7 SNORD115-29-201ENST00000362834 82 ntBASIC1.82□□□□□ -2.12
PTCD3Q96EY7 SNORD115-9-201ENST00000362912 82 ntBASIC1.82□□□□□ -2.12
PTCD3Q96EY7 SNORD115-21-201ENST00000362963 81 ntBASIC1.82□□□□□ -2.12
PTCD3Q96EY7 SNORD115-14-201ENST00000363090 81 ntBASIC1.82□□□□□ -2.12
PTCD3Q96EY7 SNORD115-13-201ENST00000363358 82 ntBASIC1.82□□□□□ -2.12
PTCD3Q96EY7 SNORD115-41-201ENST00000363608 82 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms