Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MIR653-201ENST00000385279 96 ntBASIC1.71□□□□□ -2.14
TRIM43Q96BQ3 AC107027.2-201ENST00000512197 115 ntBASIC1.71□□□□□ -2.14
TRIM43Q96BQ3 RNU6-693P-201ENST00000516134 107 ntBASIC1.71□□□□□ -2.14
TRIM43Q96BQ3 RNU7-25P-201ENST00000516544 62 ntBASIC1.71□□□□□ -2.14
TRIM43Q96BQ3 RNU6-1270P-201ENST00000517128 108 ntBASIC1.71□□□□□ -2.14
TRIM43Q96BQ3 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
TRIM43Q96BQ3 MIR6734-201ENST00000621166 68 ntBASIC1.71□□□□□ -2.14
TRIM43Q96BQ3 AC091895.1-201ENST00000624494 256 ntBASIC1.71□□□□□ -2.14
TRIM43Q96BQ3 SUMO2P12-201ENST00000405924 140 ntBASIC1.7□□□□□ -2.14
TRIM43Q96BQ3 SEPT7P4-201ENST00000437076 306 ntBASIC1.7□□□□□ -2.14
TRIM43Q96BQ3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
TRIM43Q96BQ3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.7□□□□□ -2.14
TRIM43Q96BQ3 RNU6-830P-201ENST00000516353 107 ntBASIC1.7□□□□□ -2.14
TRIM43Q96BQ3 RNU6-922P-201ENST00000516753 99 ntBASIC1.7□□□□□ -2.14
TRIM43Q96BQ3 MIR378D2-201ENST00000580636 98 ntBASIC1.7□□□□□ -2.14
TRIM43Q96BQ3 FTX_2.1-201ENST00000618816 94 ntBASIC1.7□□□□□ -2.14
TRIM43Q96BQ3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM43Q96BQ3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM43Q96BQ3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM43Q96BQ3 MIR96-201ENST00000362288 78 ntBASIC1.69□□□□□ -2.14
TRIM43Q96BQ3 RNU6-888P-201ENST00000363010 101 ntBASIC1.69□□□□□ -2.14
TRIM43Q96BQ3 SNORD61-201ENST00000384252 73 ntBASIC1.69□□□□□ -2.14
TRIM43Q96BQ3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.69□□□□□ -2.14
TRIM43Q96BQ3 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
TRIM43Q96BQ3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TRIM43Q96BQ3 RNU1-78P-201ENST00000391248 165 ntBASIC1.69□□□□□ -2.14
TRIM43Q96BQ3 AL353770.2-201ENST00000620024 78 ntBASIC1.69□□□□□ -2.14
TRIM43Q96BQ3 Y_RNA.66-201ENST00000362862 102 ntBASIC1.68□□□□□ -2.14
TRIM43Q96BQ3 Y_RNA.521-201ENST00000384560 114 ntBASIC1.68□□□□□ -2.14
TRIM43Q96BQ3 AC027119.1-201ENST00000440877 241 ntBASIC1.68□□□□□ -2.14
TRIM43Q96BQ3 SNORD116-25-201ENST00000516517 92 ntBASIC1.68□□□□□ -2.14
TRIM43Q96BQ3 SNORA18.7-201ENST00000516910 131 ntBASIC1.68□□□□□ -2.14
TRIM43Q96BQ3 SNORA31.24-201ENST00000517232 57 ntBASIC1.68□□□□□ -2.14
TRIM43Q96BQ3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRIM43Q96BQ3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRIM43Q96BQ3 Y_RNA.150-201ENST00000363562 102 ntBASIC1.67□□□□□ -2.14
TRIM43Q96BQ3 SNORD115-28-201ENST00000363931 81 ntBASIC1.67□□□□□ -2.14
TRIM43Q96BQ3 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
TRIM43Q96BQ3 MIR613-201ENST00000385248 95 ntBASIC1.67□□□□□ -2.14
TRIM43Q96BQ3 AL357312.1-201ENST00000603879 298 ntBASIC1.67□□□□□ -2.14
TRIM43Q96BQ3 SNORA1.2-201ENST00000365189 134 ntBASIC1.66□□□□□ -2.14
TRIM43Q96BQ3 Y_RNA.337-201ENST00000365312 102 ntBASIC1.66□□□□□ -2.14
TRIM43Q96BQ3 MIR518F-201ENST00000384973 87 ntBASIC1.66□□□□□ -2.14
TRIM43Q96BQ3 SNORD123-201ENST00000459473 70 ntBASIC1.66□□□□□ -2.14
TRIM43Q96BQ3 RPL30P7-201ENST00000479312 323 ntBASIC1.66□□□□□ -2.14
TRIM43Q96BQ3 SNORA74.3-201ENST00000517108 154 ntBASIC1.66□□□□□ -2.14
TRIM43Q96BQ3 AC022709.1-201ENST00000615967 87 ntBASIC1.66□□□□□ -2.14
TRIM43Q96BQ3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
TRIM43Q96BQ3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.66□□□□□ -2.14
TRIM43Q96BQ3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.66□□□□□ -2.14
TRIM43Q96BQ3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.14
TRIM43Q96BQ3 AL442644.1-201ENST00000454390 3105 ntBASIC1.65□□□□□ -2.14
TRIM43Q96BQ3 RNU6-886P-201ENST00000384319 105 ntBASIC1.65□□□□□ -2.15
TRIM43Q96BQ3 Y_RNA.555-201ENST00000384673 110 ntBASIC1.65□□□□□ -2.15
TRIM43Q96BQ3 RNU6-239P-201ENST00000390990 99 ntBASIC1.65□□□□□ -2.15
TRIM43Q96BQ3 U8.17-201ENST00000391292 132 ntBASIC1.65□□□□□ -2.15
TRIM43Q96BQ3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM43Q96BQ3 AC074198.2-201ENST00000508153 258 ntBASIC1.65□□□□□ -2.15
TRIM43Q96BQ3 RNU6-970P-201ENST00000516312 107 ntBASIC1.65□□□□□ -2.15
TRIM43Q96BQ3 AC007751.1-201ENST00000529260 376 ntBASIC1.65□□□□□ -2.15
TRIM43Q96BQ3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.65□□□□□ -2.15
TRIM43Q96BQ3 AC134878.1-201ENST00000619901 243 ntBASIC1.65□□□□□ -2.15
TRIM43Q96BQ3 AP000648.3-201ENST00000623539 4507 ntBASIC1.64□□□□□ -2.15
TRIM43Q96BQ3 RNU4-84P-201ENST00000364200 139 ntBASIC1.64□□□□□ -2.15
TRIM43Q96BQ3 SNORA25.7-201ENST00000364375 127 ntBASIC1.64□□□□□ -2.15
TRIM43Q96BQ3 MIR548A2-201ENST00000384956 97 ntBASIC1.64□□□□□ -2.15
TRIM43Q96BQ3 RNU5E-9P-201ENST00000411164 104 ntBASIC1.64□□□□□ -2.15
TRIM43Q96BQ3 AL354695.1-201ENST00000427935 228 ntBASIC1.64□□□□□ -2.15
TRIM43Q96BQ3 AC087499.4-201ENST00000448505 178 ntBASIC1.64□□□□□ -2.15
TRIM43Q96BQ3 RNU4-57P-201ENST00000515980 135 ntBASIC1.64□□□□□ -2.15
TRIM43Q96BQ3 RNU7-181P-201ENST00000517234 74 ntBASIC1.64□□□□□ -2.15
TRIM43Q96BQ3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM43Q96BQ3 Y_RNA.441-201ENST00000384123 112 ntBASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 Y_RNA.542-201ENST00000384641 111 ntBASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 SNORD41-201ENST00000386967 70 ntBASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 RNU6-1135P-201ENST00000411083 103 ntBASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 RPL39P39-201ENST00000455840 151 ntBASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 AC107297.1-201ENST00000459991 176 ntBASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 SNORD111.1-201ENST00000516421 86 ntBASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 RNU7-43P-201ENST00000516554 64 ntBASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 RNU6-902P-201ENST00000517212 91 ntBASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 AL121890.5-201ENST00000620848 304 ntBASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRIM43Q96BQ3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 SNORD114-26-201ENST00000363543 72 ntBASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 RNA5SP325-201ENST00000363756 130 ntBASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 RNU6-978P-201ENST00000364371 103 ntBASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 Y_RNA.393-201ENST00000383936 102 ntBASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 MIR520C-201ENST00000385005 87 ntBASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 MIR3129-201ENST00000581095 76 ntBASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 MIR6779-201ENST00000617283 64 ntBASIC1.62□□□□□ -2.15
TRIM43Q96BQ3 Y_RNA.241-201ENST00000364470 117 ntBASIC1.61□□□□□ -2.15
TRIM43Q96BQ3 Y_RNA.272-201ENST00000364696 102 ntBASIC1.61□□□□□ -2.15
TRIM43Q96BQ3 SNORA1-201ENST00000384107 130 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms