Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 MIR3198-2-201ENST00000577868 80 ntBASIC1.78□□□□□ -2.12
RAPGEF4Q8WZA2 SNORA4-201ENST00000584302 138 ntBASIC1.78□□□□□ -2.12
RAPGEF4Q8WZA2 RNU6-597P-201ENST00000365620 102 ntBASIC1.77□□□□□ -2.13
RAPGEF4Q8WZA2 SNORD61-201ENST00000384252 73 ntBASIC1.77□□□□□ -2.13
RAPGEF4Q8WZA2 MIR526A1-201ENST00000384897 85 ntBASIC1.77□□□□□ -2.13
RAPGEF4Q8WZA2 AC006461.1-201ENST00000412637 326 ntBASIC1.77□□□□□ -2.13
RAPGEF4Q8WZA2 AC004223.1-201ENST00000479840 271 ntBASIC1.77□□□□□ -2.13
RAPGEF4Q8WZA2 SUMO2P16-201ENST00000519475 264 ntBASIC1.77□□□□□ -2.13
RAPGEF4Q8WZA2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.77□□□□□ -2.13
RAPGEF4Q8WZA2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RAPGEF4Q8WZA2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.77□□□□□ -2.13
RAPGEF4Q8WZA2 Y_RNA.337-201ENST00000365312 102 ntBASIC1.76□□□□□ -2.13
RAPGEF4Q8WZA2 SNORA2.2-201ENST00000365473 135 ntBASIC1.76□□□□□ -2.13
RAPGEF4Q8WZA2 MIR518F-201ENST00000384973 87 ntBASIC1.76□□□□□ -2.13
RAPGEF4Q8WZA2 MIR548O-201ENST00000408583 114 ntBASIC1.76□□□□□ -2.13
RAPGEF4Q8WZA2 SNORD116-25-201ENST00000516517 92 ntBASIC1.76□□□□□ -2.13
RAPGEF4Q8WZA2 AC007751.1-201ENST00000529260 376 ntBASIC1.76□□□□□ -2.13
RAPGEF4Q8WZA2 MIR3660-201ENST00000584845 100 ntBASIC1.76□□□□□ -2.13
RAPGEF4Q8WZA2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.76□□□□□ -2.13
RAPGEF4Q8WZA2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
RAPGEF4Q8WZA2 Y_RNA.547-201ENST00000384654 119 ntBASIC1.75□□□□□ -2.13
RAPGEF4Q8WZA2 snoU13.9-201ENST00000458927 103 ntBASIC1.75□□□□□ -2.13
RAPGEF4Q8WZA2 AC005908.1-201ENST00000468701 347 ntBASIC1.75□□□□□ -2.13
RAPGEF4Q8WZA2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.75□□□□□ -2.13
RAPGEF4Q8WZA2 AC008834.1-201ENST00000511612 175 ntBASIC1.75□□□□□ -2.13
RAPGEF4Q8WZA2 RNU6-917P-201ENST00000516294 104 ntBASIC1.75□□□□□ -2.13
RAPGEF4Q8WZA2 RNU7-25P-201ENST00000516544 62 ntBASIC1.75□□□□□ -2.13
RAPGEF4Q8WZA2 MIR3144-201ENST00000579460 79 ntBASIC1.75□□□□□ -2.13
RAPGEF4Q8WZA2 AL365205.2-201ENST00000594586 68 ntBASIC1.75□□□□□ -2.13
RAPGEF4Q8WZA2 ICE2P2-201ENST00000483823 2787 ntBASIC1.75□□□□□ -2.13
RAPGEF4Q8WZA2 SNORD114-22-201ENST00000365423 72 ntBASIC1.74□□□□□ -2.13
RAPGEF4Q8WZA2 Y_RNA.393-201ENST00000383936 102 ntBASIC1.74□□□□□ -2.13
RAPGEF4Q8WZA2 Y_RNA.542-201ENST00000384641 111 ntBASIC1.74□□□□□ -2.13
RAPGEF4Q8WZA2 MIR136-201ENST00000385207 82 ntBASIC1.74□□□□□ -2.13
RAPGEF4Q8WZA2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RAPGEF4Q8WZA2 SNORA40.6-201ENST00000391153 128 ntBASIC1.74□□□□□ -2.13
RAPGEF4Q8WZA2 RNU4-57P-201ENST00000515980 135 ntBASIC1.74□□□□□ -2.13
RAPGEF4Q8WZA2 RNU6-693P-201ENST00000516134 107 ntBASIC1.74□□□□□ -2.13
RAPGEF4Q8WZA2 AC090049.2-201ENST00000550377 109 ntBASIC1.74□□□□□ -2.13
RAPGEF4Q8WZA2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RAPGEF4Q8WZA2 RNA5SP259-201ENST00000365541 109 ntBASIC1.73□□□□□ -2.13
RAPGEF4Q8WZA2 MIR3646-201ENST00000578301 84 ntBASIC1.73□□□□□ -2.13
RAPGEF4Q8WZA2 SNORD115-28-201ENST00000363931 81 ntBASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 RNU6-1062P-201ENST00000383908 107 ntBASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 RNU6-804P-201ENST00000384286 107 ntBASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 RNU6-768P-201ENST00000384683 107 ntBASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 MIR516B2-201ENST00000385190 85 ntBASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 AC092991.1-201ENST00000477176 376 ntBASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 RNU6-1270P-201ENST00000517128 108 ntBASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 DNAJC19P2-201ENST00000593340 302 ntBASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 AC104465.1-201ENST00000611365 139 ntBASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 AC106754.2-201ENST00000623006 233 ntBASIC1.72□□□□□ -2.13
RAPGEF4Q8WZA2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 SNORD1A-201ENST00000364968 72 ntBASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 RNU6-1292P-201ENST00000383856 107 ntBASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 Y_RNA.521-201ENST00000384560 114 ntBASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 AC087499.4-201ENST00000448505 178 ntBASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 AL513534.2-201ENST00000603836 250 ntBASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 AC134878.1-201ENST00000619901 243 ntBASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 AC015726.2-201ENST00000620112 122 ntBASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 AC021753.1-201ENST00000635724 168 ntBASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RAPGEF4Q8WZA2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RAPGEF4Q8WZA2 MIR96-201ENST00000362288 78 ntBASIC1.7□□□□□ -2.14
RAPGEF4Q8WZA2 SNORD33-201ENST00000362761 85 ntBASIC1.7□□□□□ -2.14
RAPGEF4Q8WZA2 SNORA25.7-201ENST00000364375 127 ntBASIC1.7□□□□□ -2.14
RAPGEF4Q8WZA2 RNU6-449P-201ENST00000383914 107 ntBASIC1.7□□□□□ -2.14
RAPGEF4Q8WZA2 SNORA1-201ENST00000384107 130 ntBASIC1.7□□□□□ -2.14
RAPGEF4Q8WZA2 HSPE1P24-201ENST00000450782 238 ntBASIC1.7□□□□□ -2.14
RAPGEF4Q8WZA2 RNU6-255P-201ENST00000516957 105 ntBASIC1.7□□□□□ -2.14
RAPGEF4Q8WZA2 FAM106DP-201ENST00000586416 501 ntBASIC1.7□□□□□ -2.14
RAPGEF4Q8WZA2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.7□□□□□ -2.14
RAPGEF4Q8WZA2 Y_RNA.37-201ENST00000362606 108 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 RNU6-1130P-201ENST00000365434 107 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 Y_RNA.398-201ENST00000383952 99 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 Y_RNA.410-201ENST00000383992 113 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 RNU6-997P-201ENST00000384725 107 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 MIR624-201ENST00000385217 97 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 MIR934-201ENST00000401241 83 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 RNU6-938P-201ENST00000411285 103 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 AF228730.3-201ENST00000436691 102 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 RNU6-322P-201ENST00000516010 103 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 SNORA74.3-201ENST00000517108 154 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 MTND1P7-201ENST00000632801 297 ntBASIC1.69□□□□□ -2.14
RAPGEF4Q8WZA2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RAPGEF4Q8WZA2 Y_RNA.170-201ENST00000363746 110 ntBASIC1.68□□□□□ -2.14
RAPGEF4Q8WZA2 SNORD41-201ENST00000386967 70 ntBASIC1.68□□□□□ -2.14
RAPGEF4Q8WZA2 SNORD77.3-201ENST00000391113 65 ntBASIC1.68□□□□□ -2.14
RAPGEF4Q8WZA2 RNU1-78P-201ENST00000391248 165 ntBASIC1.68□□□□□ -2.14
RAPGEF4Q8WZA2 SNORA75.5-201ENST00000391291 81 ntBASIC1.68□□□□□ -2.14
RAPGEF4Q8WZA2 U8.17-201ENST00000391292 132 ntBASIC1.68□□□□□ -2.14
RAPGEF4Q8WZA2 AC027119.1-201ENST00000440877 241 ntBASIC1.68□□□□□ -2.14
RAPGEF4Q8WZA2 AC079140.2-201ENST00000506193 142 ntBASIC1.68□□□□□ -2.14
RAPGEF4Q8WZA2 AL365434.2-201ENST00000607979 234 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms