Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC019288.1-201ENST00000557918 224 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 MIR548AR-201ENST00000582191 57 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 MIR3192-201ENST00000584920 77 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.771-201ENST00000598668 102 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 AC006006.1-201ENST00000603082 144 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 AL049861.1-201ENST00000603130 150 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 AC006441.5-201ENST00000612680 209 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.789-201ENST00000622480 102 ntBASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
SHROOM3Q8TF72 SNORA25.1-201ENST00000362326 128 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.183-201ENST00000363882 113 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.242-201ENST00000364473 110 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 U8.17-201ENST00000391292 132 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 AL392103.1-201ENST00000447000 198 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 DEFB117-201ENST00000602356 141 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 AC023932.2-201ENST00000603176 175 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 AC015726.2-201ENST00000620112 122 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 AL391516.1-201ENST00000554380 2449 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 RNU6-1272P-201ENST00000362776 107 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 RNU6-144P-201ENST00000383951 107 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.537-201ENST00000384626 109 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 MIR942-201ENST00000401111 86 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 AL603910.2-201ENST00000407268 136 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 RNU6-602P-201ENST00000411155 105 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 RNU7-90P-201ENST00000459216 62 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 CYCTP-201ENST00000504253 315 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 SNORD79.1-201ENST00000516069 84 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 RNU2-31P-201ENST00000516954 155 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 RNU6-1270P-201ENST00000517128 108 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 MIR4423-201ENST00000580922 80 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 MIR4636-201ENST00000582271 80 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 AL355297.3-201ENST00000604082 446 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 7SK.10-201ENST00000621414 298 ntBASIC0.56□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.117-201ENST00000363294 101 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 RNU6-238P-201ENST00000363313 106 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 RNU6-1205P-201ENST00000363625 106 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 RNU6-728P-201ENST00000365375 104 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.363-201ENST00000365529 113 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 MIR15B-201ENST00000385045 98 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 RNU6-651P-201ENST00000411040 105 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 TRBVB-201ENST00000477100 408 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 AP000942.4-201ENST00000604811 241 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 MIR4791-201ENST00000607666 84 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 AL021707.8-201ENST00000609428 183 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 MIR4251-201ENST00000635819 61 ntBASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.55□□□□□ -2.32
SHROOM3Q8TF72 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 MIR335-201ENST00000362173 94 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 RNA5SP327-201ENST00000362494 101 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.133-201ENST00000363428 110 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.145-201ENST00000363527 102 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 SNORD14E-201ENST00000364009 85 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.396-201ENST00000383949 103 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 SNORA8.3-201ENST00000384679 139 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 MIR608-201ENST00000384820 100 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 RNU6-1109P-201ENST00000391187 107 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.590-201ENST00000410140 107 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 RNU6-1203P-201ENST00000410703 110 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 AC023449.1-201ENST00000454464 154 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 SCARNA8-201ENST00000515924 131 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 RNU6-191P-201ENST00000516295 94 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 AC008507.4-201ENST00000585464 127 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.47-201ENST00000362697 108 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 RNU6-1209P-201ENST00000363655 107 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 RNA5SP48-201ENST00000363969 126 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.634-201ENST00000364811 113 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 SNORA1.2-201ENST00000365189 134 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 SNORA2A-201ENST00000383885 135 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 MIR1302-7-201ENST00000408841 72 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 RNU6-327P-201ENST00000516270 127 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 MIR4653-201ENST00000585107 83 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 BX284668.6-201ENST00000606899 438 ntBASIC0.54□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.237-201ENST00000364439 102 ntBASIC0.53□□□□□ -2.32
SHROOM3Q8TF72 RNU6-396P-201ENST00000365369 105 ntBASIC0.53□□□□□ -2.32
SHROOM3Q8TF72 SNORA24-201ENST00000384096 131 ntBASIC0.53□□□□□ -2.32
SHROOM3Q8TF72 RNU6-662P-201ENST00000384253 104 ntBASIC0.53□□□□□ -2.32
SHROOM3Q8TF72 MIR200A-201ENST00000384875 90 ntBASIC0.53□□□□□ -2.32
SHROOM3Q8TF72 MT-TW-201ENST00000387382 68 ntBASIC0.53□□□□□ -2.32
SHROOM3Q8TF72 AL606490.4-201ENST00000423117 127 ntBASIC0.53□□□□□ -2.32
SHROOM3Q8TF72 Y_RNA.637-201ENST00000459424 114 ntBASIC0.53□□□□□ -2.32
SHROOM3Q8TF72 SNORA27.4-201ENST00000516650 95 ntBASIC0.53□□□□□ -2.32
SHROOM3Q8TF72 AL096861.1-201ENST00000610899 123 ntBASIC0.53□□□□□ -2.32
SHROOM3Q8TF72 AC012676.2-201ENST00000619258 186 ntBASIC0.53□□□□□ -2.32
SHROOM3Q8TF72 MIR103A2-201ENST00000362154 78 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 RNU6-1309P-201ENST00000363305 108 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 U8.5-201ENST00000364528 136 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 MIR802-201ENST00000390235 94 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 RNA5SP95-201ENST00000410319 137 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 AL022718.1-201ENST00000412004 84 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 AC090844.1-201ENST00000422019 156 ntBASIC0.52□□□□□ -2.33
SHROOM3Q8TF72 RNA5SP255-201ENST00000516370 107 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms