| NLGN4Y | Q8NFZ3 | PYGO1-201 | ENST00000302000 | 8488 nt | TSL 1 (best) BASIC | 1.85 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | RNU6-1123P-201 | ENST00000362347 | 106 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | RNU6-309P-201 | ENST00000364573 | 106 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | U8.17-201 | ENST00000391292 | 132 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | RNU6-661P-201 | ENST00000362409 | 107 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.241-201 | ENST00000364470 | 117 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.338-201 | ENST00000365320 | 114 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | SNORA2.2-201 | ENST00000365473 | 135 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | RNU6-81P-201 | ENST00000365608 | 104 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | SNORD18B-201 | ENST00000365659 | 72 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.410-201 | ENST00000383992 | 113 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | MIR513A1-201 | ENST00000385138 | 129 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | SUMO2P12-201 | ENST00000405924 | 140 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | AL161935.2-201 | ENST00000414627 | 60 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | RNU6-917P-201 | ENST00000516294 | 104 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | RNU6-830P-201 | ENST00000516353 | 107 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.690-201 | ENST00000516603 | 95 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | MIR5197-201 | ENST00000583721 | 112 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | SNRPGP19-201 | ENST00000603826 | 189 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | AP001340.1-201 | ENST00000624405 | 217 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| NLGN4Y | Q8NFZ3 | ATP13A3-201 | ENST00000256031 | 7322 nt | APPRIS P1 TSL 5 BASIC | 1.84 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | SI-201 | ENST00000264382 | 6011 nt | APPRIS P1 TSL 1 (best) BASIC | 1.83 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | SYT14-201 | ENST00000367015 | 5094 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.83 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | MIR342-201 | ENST00000362212 | 99 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.120-201 | ENST00000363304 | 110 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | TRAJ49-201 | ENST00000390488 | 56 nt | APPRIS P1 BASIC | 1.83 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | RN7SL274P-201 | ENST00000492268 | 272 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | SCARNA15-202 | ENST00000516881 | 127 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | SNORA77B-201 | ENST00000578179 | 125 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AC103810.8-201 | ENST00000607347 | 118 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | MIR8074-201 | ENST00000615081 | 81 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | PI15-201 | ENST00000260113 | 6732 nt | APPRIS P1 TSL 1 (best) BASIC | 1.83 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AP000648.3-201 | ENST00000623539 | 4507 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.440-201 | ENST00000384120 | 114 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | RNU6-959P-201 | ENST00000384671 | 107 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | MIR570-201 | ENST00000384917 | 97 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | MIR676-201 | ENST00000390702 | 67 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | SNORD28B-201 | ENST00000390993 | 75 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | SNX2P2-201 | ENST00000424553 | 323 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | HMGN2P19-201 | ENST00000425149 | 265 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AC087499.4-201 | ENST00000448505 | 178 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | SNORD123-201 | ENST00000459473 | 70 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AC005908.1-201 | ENST00000468701 | 347 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | RNU6-1234P-201 | ENST00000516877 | 103 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | MIR548AR-201 | ENST00000582191 | 57 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | TUG1_4.1-201 | ENST00000619464 | 181 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AC008163.1-205 | ENST00000413944 | 4649 nt | TSL 1 (best) BASIC | 1.82 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AL442644.1-201 | ENST00000454390 | 3105 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | RPS26P48-201 | ENST00000491713 | 339 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | RNU6ATAC12P-201 | ENST00000516542 | 115 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AC025887.1-201 | ENST00000578349 | 264 nt | TSL 3 BASIC | 1.81 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | MIR5089-201 | ENST00000580047 | 84 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | hsa-mir-3158-1.1-201 | ENST00000637571 | 81 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | TBL1XR1-208 | ENST00000430069 | 7948 nt | APPRIS P1 TSL 1 (best) BASIC | 1.81 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | TEX15-203 | ENST00000638951 | 11341 nt | APPRIS P1 TSL 5 BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | DYNC2H1-203 | ENST00000398093 | 12945 nt | APPRIS P3 TSL 5 BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.218-201 | ENST00000364218 | 104 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.351-201 | ENST00000365436 | 96 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.370-201 | ENST00000365589 | 108 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | RNA5SP236-201 | ENST00000516169 | 116 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.692-201 | ENST00000516627 | 105 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AC090821.2-201 | ENST00000523552 | 176 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AC009093.3-203 | ENST00000565800 | 121 nt | TSL 2 BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AC022596.1-201 | ENST00000582895 | 302 nt | TSL 5 BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AC012493.3-201 | ENST00000604494 | 112 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AL022345.2-201 | ENST00000606307 | 135 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | U7.2-201 | ENST00000607576 | 63 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AL627230.6-201 | ENST00000611129 | 280 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | MIR8063-201 | ENST00000621930 | 81 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | XIRP2-201 | ENST00000295237 | 5246 nt | TSL 2 BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | RNU6-235P-201 | ENST00000362644 | 107 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | SNORA27-201 | ENST00000384323 | 126 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | TRAJ11-201 | ENST00000390526 | 60 nt | APPRIS P1 BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | SNORA40.5-201 | ENST00000391061 | 128 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AL603914.1-201 | ENST00000401964 | 204 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | RNA5SP489-201 | ENST00000410986 | 109 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.651-201 | ENST00000459380 | 103 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AC007450.1-201 | ENST00000536492 | 188 nt | TSL 3 BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | MIR3121-201 | ENST00000579680 | 77 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | CERS6-AS1-202 | ENST00000594898 | 499 nt | TSL 5 BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AL096840.1-201 | ENST00000603287 | 93 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | C16orf97-206 | ENST00000622950 | 415 nt | TSL 2 BASIC | 1.79 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | BRCA1-202 | ENST00000354071 | 4497 nt | TSL 1 (best) BASIC | 1.78 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AC108729.3-201 | ENST00000513484 | 108 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | SNORA25.15-201 | ENST00000516487 | 89 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | RNU6-922P-201 | ENST00000516753 | 99 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.757-201 | ENST00000578934 | 114 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AP001109.1-201 | ENST00000587114 | 279 nt | TSL 3 BASIC | 1.78 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AL365222.1-201 | ENST00000614661 | 98 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| NLGN4Y | Q8NFZ3 | AL596211.1-201 | ENST00000569873 | 2277 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.71-201 | ENST00000362892 | 104 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.114-201 | ENST00000363265 | 113 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| NLGN4Y | Q8NFZ3 | MIR539-201 | ENST00000365690 | 78 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.525-201 | ENST00000384570 | 113 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| NLGN4Y | Q8NFZ3 | LINC01866-201 | ENST00000421181 | 201 nt | TSL 3 BASIC | 1.77 | □□□□□ -2.13 | | |
| NLGN4Y | Q8NFZ3 | AC108667.1-201 | ENST00000428618 | 249 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| NLGN4Y | Q8NFZ3 | AC003989.2-201 | ENST00000440224 | 169 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| NLGN4Y | Q8NFZ3 | MTATP6P21-201 | ENST00000440681 | 189 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| NLGN4Y | Q8NFZ3 | RNU7-70P-201 | ENST00000516941 | 66 nt | BASIC | 1.77 | □□□□□ -2.13 | | |