Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
NUP43Q8NFH3 MIR4524B-201ENST00000581569 115 ntBASIC2.31□□□□□ -2.04
NUP43Q8NFH3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.31□□□□□ -2.04
NUP43Q8NFH3 AC021613.1-201ENST00000623880 111 ntBASIC2.31□□□□□ -2.04
NUP43Q8NFH3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
NUP43Q8NFH3 AC092881.1-201ENST00000638218 2733 ntBASIC2.31□□□□□ -2.04
NUP43Q8NFH3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
NUP43Q8NFH3 RNU6-112P-201ENST00000363599 104 ntBASIC2.3□□□□□ -2.04
NUP43Q8NFH3 MIR516B2-201ENST00000385190 85 ntBASIC2.3□□□□□ -2.04
NUP43Q8NFH3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NUP43Q8NFH3 RNA5SP501-201ENST00000410990 112 ntBASIC2.3□□□□□ -2.04
NUP43Q8NFH3 RNU2-11P-201ENST00000459191 187 ntBASIC2.3□□□□□ -2.04
NUP43Q8NFH3 RNU6-109P-201ENST00000516364 107 ntBASIC2.3□□□□□ -2.04
NUP43Q8NFH3 RNU6-184P-201ENST00000516514 107 ntBASIC2.3□□□□□ -2.04
NUP43Q8NFH3 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
NUP43Q8NFH3 AL162726.3-218ENST00000636401 95 ntBASIC2.3□□□□□ -2.04
NUP43Q8NFH3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
NUP43Q8NFH3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP43Q8NFH3 MIR6073-201ENST00000352083 89 ntBASIC2.29□□□□□ -2.04
NUP43Q8NFH3 RNA5SP68-201ENST00000363885 119 ntBASIC2.29□□□□□ -2.04
NUP43Q8NFH3 Y_RNA.544-201ENST00000384650 113 ntBASIC2.29□□□□□ -2.04
NUP43Q8NFH3 MIR452-201ENST00000385020 85 ntBASIC2.29□□□□□ -2.04
NUP43Q8NFH3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.29□□□□□ -2.04
NUP43Q8NFH3 POLR2J4-204ENST00000418424 324 ntBASIC2.29□□□□□ -2.04
NUP43Q8NFH3 AL512326.2-201ENST00000426359 151 ntBASIC2.29□□□□□ -2.04
NUP43Q8NFH3 AC093850.1-201ENST00000454121 251 ntBASIC2.29□□□□□ -2.04
NUP43Q8NFH3 AC099513.1-201ENST00000490423 301 ntBASIC2.29□□□□□ -2.04
NUP43Q8NFH3 AC021506.2-201ENST00000612354 169 ntBASIC2.29□□□□□ -2.04
NUP43Q8NFH3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NUP43Q8NFH3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.28□□□□□ -2.04
NUP43Q8NFH3 Y_RNA.78-201ENST00000362970 110 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 SNORA67.1-201ENST00000364749 141 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 RNA5SP181-201ENST00000410246 98 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 AL513328.1-201ENST00000446460 224 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 snoU13.26-201ENST00000459452 105 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 RNU7-45P-201ENST00000459460 63 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 RPS23P4-201ENST00000487908 423 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 RNU1-41P-201ENST00000516161 162 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 RNU6-904P-201ENST00000516206 101 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 SNORA40.13-201ENST00000516379 120 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 RNU1-48P-201ENST00000516400 162 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 RNU7-6P-201ENST00000516845 62 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 AC004812.1-201ENST00000540773 146 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 MIR4769-201ENST00000584126 77 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 AC087741.2-201ENST00000619415 172 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 AC095038.3-201ENST00000634439 195 ntBASIC2.28□□□□□ -2.04
NUP43Q8NFH3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NUP43Q8NFH3 MIR302B-201ENST00000362188 73 ntBASIC2.27□□□□□ -2.05
NUP43Q8NFH3 AL022718.1-201ENST00000412004 84 ntBASIC2.27□□□□□ -2.05
NUP43Q8NFH3 RNU2-13P-201ENST00000515909 113 ntBASIC2.27□□□□□ -2.05
NUP43Q8NFH3 RNA5SP148-201ENST00000516527 94 ntBASIC2.27□□□□□ -2.05
NUP43Q8NFH3 SNORD14A-201ENST00000606526 91 ntBASIC2.27□□□□□ -2.05
NUP43Q8NFH3 AC103810.6-201ENST00000606708 136 ntBASIC2.27□□□□□ -2.05
NUP43Q8NFH3 MIR6817-201ENST00000615588 66 ntBASIC2.27□□□□□ -2.05
NUP43Q8NFH3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
NUP43Q8NFH3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
NUP43Q8NFH3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.26□□□□□ -2.05
NUP43Q8NFH3 RNU6-1131P-201ENST00000364955 107 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 SNORA1.2-201ENST00000365189 134 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 Y_RNA.370-201ENST00000365589 108 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 MIR488-201ENST00000365739 83 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 RNU6-49P-201ENST00000384256 107 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 Y_RNA.531-201ENST00000384589 121 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 MIR526A1-201ENST00000384897 85 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 MIR136-201ENST00000385207 82 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 MIR524-201ENST00000385242 87 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 RNA5SP270-201ENST00000411361 118 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 RNU7-34P-201ENST00000459394 64 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 RNA5SP24-201ENST00000516478 95 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 Y_RNA.818-201ENST00000618813 71 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 AL513423.1-201ENST00000621695 132 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 AC010297.1-201ENST00000623948 149 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.26□□□□□ -2.05
NUP43Q8NFH3 FO624990.1-201ENST00000636373 85 ntBASIC2.26□□□□□ -2.05
NUP43Q8NFH3 MIR21-201ENST00000362134 72 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 SNORD115-19-201ENST00000363098 82 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 SNORD115-18-201ENST00000363293 82 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 SNORD115-17-201ENST00000364612 82 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 SNORA24-201ENST00000384096 131 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 RNU1-52P-201ENST00000384190 164 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 MIR660-201ENST00000385235 97 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 RNU6-816P-201ENST00000390914 107 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 RNU6-1268P-201ENST00000391214 107 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 RNU6-1239P-201ENST00000391310 107 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 RNU2-7P-201ENST00000410794 178 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 RN7SKP192-201ENST00000411291 327 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 RPL39P25-201ENST00000449384 154 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 snoU13.27-201ENST00000459278 104 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 RNU6-1258P-201ENST00000516911 111 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 RNU6-158P-201ENST00000517104 100 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 AC141557.1-201ENST00000540982 400 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 MIR4709-201ENST00000577272 72 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 MIR3618-201ENST00000580330 88 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 AC064859.1-201ENST00000624741 174 ntBASIC2.25□□□□□ -2.05
NUP43Q8NFH3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
NUP43Q8NFH3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NUP43Q8NFH3 RNU6-661P-201ENST00000362409 107 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms