Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC245047.7-201ENST00000440265 293 ntBASIC1.14□□□□□ -2.23
CPSF7Q8N684 RNU7-41P-201ENST00000515917 61 ntBASIC1.14□□□□□ -2.23
CPSF7Q8N684 SNORA31.4-201ENST00000516049 129 ntBASIC1.14□□□□□ -2.23
CPSF7Q8N684 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
CPSF7Q8N684 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.14□□□□□ -2.23
CPSF7Q8N684 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CPSF7Q8N684 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CPSF7Q8N684 RNU6-103P-201ENST00000363686 107 ntBASIC1.13□□□□□ -2.23
CPSF7Q8N684 RNU6-923P-201ENST00000364753 107 ntBASIC1.13□□□□□ -2.23
CPSF7Q8N684 MIR613-201ENST00000385248 95 ntBASIC1.13□□□□□ -2.23
CPSF7Q8N684 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
CPSF7Q8N684 SNRPGP8-201ENST00000454064 226 ntBASIC1.13□□□□□ -2.23
CPSF7Q8N684 AL133373.1-201ENST00000497098 94 ntBASIC1.13□□□□□ -2.23
CPSF7Q8N684 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.13□□□□□ -2.23
CPSF7Q8N684 RNU4-57P-201ENST00000515980 135 ntBASIC1.13□□□□□ -2.23
CPSF7Q8N684 RNU6-693P-201ENST00000516134 107 ntBASIC1.13□□□□□ -2.23
CPSF7Q8N684 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
CPSF7Q8N684 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CPSF7Q8N684 MIR96-201ENST00000362288 78 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 SNORD45.3-201ENST00000363836 72 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 Y_RNA.188-201ENST00000363952 111 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 RNY1-201ENST00000364228 113 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 SNORA1.2-201ENST00000365189 134 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 RNU6-484P-201ENST00000384016 107 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 RNU6-1067P-201ENST00000384752 107 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 MIR7-2-201ENST00000384970 110 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 RNU6-504P-201ENST00000516568 104 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 RNU6-1270P-201ENST00000517128 108 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 AC008133.2-201ENST00000624540 351 ntBASIC1.12□□□□□ -2.23
CPSF7Q8N684 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.12□□□□□ -2.23
CPSF7Q8N684 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
CPSF7Q8N684 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CPSF7Q8N684 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CPSF7Q8N684 Y_RNA.91-201ENST00000363042 107 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 RNA5SP48-201ENST00000363969 126 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 RNU1-93P-201ENST00000364704 169 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 Y_RNA.634-201ENST00000364811 113 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 RNU6-728P-201ENST00000365375 104 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 Y_RNA.370-201ENST00000365589 108 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 SNORD24-201ENST00000383884 75 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 SNORD61-201ENST00000384252 73 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 MIR570-201ENST00000384917 97 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 RNU6-910P-201ENST00000390844 107 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 snoU13.25-201ENST00000458945 104 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 RNA5SP153-201ENST00000516498 76 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 RNU6-1271P-201ENST00000517049 105 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 SNORA70.22-201ENST00000517160 124 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 AC007751.1-201ENST00000529260 376 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 MIR4744-201ENST00000581563 82 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 RNU2-4P-201ENST00000606190 192 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 AL022345.2-201ENST00000606307 135 ntBASIC1.11□□□□□ -2.23
CPSF7Q8N684 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CPSF7Q8N684 Y_RNA.7-201ENST00000362352 102 ntBASIC1.1□□□□□ -2.23
CPSF7Q8N684 SNORD115-28-201ENST00000363931 81 ntBASIC1.1□□□□□ -2.23
CPSF7Q8N684 SNORA25.8-201ENST00000364831 128 ntBASIC1.1□□□□□ -2.23
CPSF7Q8N684 SNORA25-201ENST00000384384 134 ntBASIC1.1□□□□□ -2.23
CPSF7Q8N684 MIR518F-201ENST00000384973 87 ntBASIC1.1□□□□□ -2.23
CPSF7Q8N684 SNORA79-201ENST00000408376 140 ntBASIC1.1□□□□□ -2.23
CPSF7Q8N684 RNU6-561P-201ENST00000516222 102 ntBASIC1.1□□□□□ -2.23
CPSF7Q8N684 AC109810.1-201ENST00000534066 224 ntBASIC1.1□□□□□ -2.23
CPSF7Q8N684 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.1□□□□□ -2.23
CPSF7Q8N684 Y_RNA.66-201ENST00000362862 102 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 RNU6-888P-201ENST00000363010 101 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 SNORA25.3-201ENST00000363205 127 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 Y_RNA.200-201ENST00000364018 102 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 MIR548A2-201ENST00000384956 97 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 AL121914.1-201ENST00000450188 156 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 AC107297.1-201ENST00000459991 176 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 Y_RNA.797-201ENST00000515977 94 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 RNA5SP480-201ENST00000516840 109 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CPSF7Q8N684 MIR4308-201ENST00000580634 81 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 AC022709.1-201ENST00000615967 87 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 MIR4251-201ENST00000635819 61 ntBASIC1.09□□□□□ -2.23
CPSF7Q8N684 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
CPSF7Q8N684 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CPSF7Q8N684 MIR103A2-201ENST00000362154 78 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 Y_RNA.37-201ENST00000362606 108 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 Y_RNA.83-201ENST00000363005 113 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 RNA5SP264-201ENST00000363115 107 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 Y_RNA.241-201ENST00000364470 117 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 Y_RNA.363-201ENST00000365529 113 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 SNORA51.10-201ENST00000384418 136 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 RNU4-70P-201ENST00000384579 139 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 Y_RNA.571-201ENST00000384753 98 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CPSF7Q8N684 RNU6-578P-201ENST00000390980 103 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 RNU6-847P-201ENST00000411115 108 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.08□□□□□ -2.24
CPSF7Q8N684 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
CPSF7Q8N684 AC087499.4-201ENST00000448505 178 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.08□□□□□ -2.24
CPSF7Q8N684 RNU6-197P-201ENST00000516680 100 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.08□□□□□ -2.24
CPSF7Q8N684 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.08□□□□□ -2.24
CPSF7Q8N684 AC097639.2-201ENST00000603159 172 ntBASIC1.08□□□□□ -2.24
CPSF7Q8N684 PRELID3BP2-201ENST00000605362 201 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms