Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 RNA5SP437-201ENST00000517249 129 ntBASIC2.93□□□□□ -1.94
PHTF2Q8N3S3 MIR548AR-201ENST00000582191 57 ntBASIC2.93□□□□□ -1.94
PHTF2Q8N3S3 Y_RNA.773-201ENST00000607168 90 ntBASIC2.93□□□□□ -1.94
PHTF2Q8N3S3 MIR4791-201ENST00000607666 84 ntBASIC2.93□□□□□ -1.94
PHTF2Q8N3S3 MIR6717-201ENST00000622747 73 ntBASIC2.93□□□□□ -1.94
PHTF2Q8N3S3 AC095038.3-201ENST00000634439 195 ntBASIC2.93□□□□□ -1.94
PHTF2Q8N3S3 MIR1255B1-201ENST00000636325 63 ntBASIC2.93□□□□□ -1.94
PHTF2Q8N3S3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
PHTF2Q8N3S3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PHTF2Q8N3S3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PHTF2Q8N3S3 SNORA24-201ENST00000384096 131 ntBASIC2.92□□□□□ -1.94
PHTF2Q8N3S3 Y_RNA.537-201ENST00000384626 109 ntBASIC2.92□□□□□ -1.94
PHTF2Q8N3S3 RNA5SP344-201ENST00000411081 104 ntBASIC2.92□□□□□ -1.94
PHTF2Q8N3S3 AC087499.2-201ENST00000432861 149 ntBASIC2.92□□□□□ -1.94
PHTF2Q8N3S3 RNU2-13P-201ENST00000515909 113 ntBASIC2.92□□□□□ -1.94
PHTF2Q8N3S3 MIR4658-201ENST00000584344 65 ntBASIC2.92□□□□□ -1.94
PHTF2Q8N3S3 MIR6733-201ENST00000635723 61 ntBASIC2.92□□□□□ -1.94
PHTF2Q8N3S3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PHTF2Q8N3S3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PHTF2Q8N3S3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.91□□□□□ -1.94
PHTF2Q8N3S3 RNU6-832P-201ENST00000363319 107 ntBASIC2.91□□□□□ -1.94
PHTF2Q8N3S3 Y_RNA.360-201ENST00000365512 102 ntBASIC2.91□□□□□ -1.94
PHTF2Q8N3S3 RNU6-296P-201ENST00000384608 107 ntBASIC2.91□□□□□ -1.94
PHTF2Q8N3S3 RNY1P7-201ENST00000384743 110 ntBASIC2.91□□□□□ -1.94
PHTF2Q8N3S3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PHTF2Q8N3S3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
PHTF2Q8N3S3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PHTF2Q8N3S3 MIR424-201ENST00000362227 98 ntBASIC2.9□□□□□ -1.95
PHTF2Q8N3S3 Y_RNA.354-201ENST00000365448 111 ntBASIC2.9□□□□□ -1.95
PHTF2Q8N3S3 RNU6-820P-201ENST00000384273 107 ntBASIC2.9□□□□□ -1.95
PHTF2Q8N3S3 MIR450A2-201ENST00000385022 100 ntBASIC2.9□□□□□ -1.95
PHTF2Q8N3S3 SNORA7.5-201ENST00000410672 110 ntBASIC2.9□□□□□ -1.95
PHTF2Q8N3S3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.9□□□□□ -1.95
PHTF2Q8N3S3 RN7SL499P-201ENST00000481141 276 ntBASIC2.9□□□□□ -1.95
PHTF2Q8N3S3 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.9□□□□□ -1.95
PHTF2Q8N3S3 FAM106DP-201ENST00000586416 501 ntBASIC2.9□□□□□ -1.95
PHTF2Q8N3S3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.9□□□□□ -1.95
PHTF2Q8N3S3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PHTF2Q8N3S3 RNA5SP126-201ENST00000365092 109 ntBASIC2.89□□□□□ -1.95
PHTF2Q8N3S3 RNU6-1134P-201ENST00000365156 101 ntBASIC2.89□□□□□ -1.95
PHTF2Q8N3S3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.89□□□□□ -1.95
PHTF2Q8N3S3 snoU13.16-201ENST00000459350 104 ntBASIC2.89□□□□□ -1.95
PHTF2Q8N3S3 RNU6-1018P-201ENST00000516577 106 ntBASIC2.89□□□□□ -1.95
PHTF2Q8N3S3 RNU6-762P-201ENST00000517107 102 ntBASIC2.89□□□□□ -1.95
PHTF2Q8N3S3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.89□□□□□ -1.95
PHTF2Q8N3S3 AL020996.3-201ENST00000606617 222 ntBASIC2.89□□□□□ -1.95
PHTF2Q8N3S3 AC103810.6-201ENST00000606708 136 ntBASIC2.89□□□□□ -1.95
PHTF2Q8N3S3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PHTF2Q8N3S3 AL161431.1-201ENST00000618966 4205 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 RNU1-112P-201ENST00000364401 164 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 SNORD45B-201ENST00000364617 72 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 Y_RNA.342-201ENST00000365352 113 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 Y_RNA.466-201ENST00000384294 113 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 MIR577-201ENST00000385196 96 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 MIR887-201ENST00000401258 79 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 RPL23AP6-201ENST00000446637 472 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 SNORD109B-201ENST00000458961 67 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 SNORD109A-201ENST00000459128 67 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 RN7SL429P-201ENST00000479090 223 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 RN7SL489P-201ENST00000486185 223 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 RN7SL327P-201ENST00000488659 223 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 RNU6-1258P-201ENST00000516911 111 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 MIR548AE2-201ENST00000583456 67 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 AC096720.1-201ENST00000604441 183 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 RN7SL853P-201ENST00000617250 223 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 MIR6841-201ENST00000637129 72 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 AL512310.12-203ENST00000640543 90 ntBASIC2.88□□□□□ -1.95
PHTF2Q8N3S3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 Y_RNA.470-201ENST00000384307 117 ntBASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 MIR605-201ENST00000385078 83 ntBASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 MIR9-1-201ENST00000385198 89 ntBASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 RNU6-360P-201ENST00000390944 104 ntBASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 SNORD28B-201ENST00000390993 75 ntBASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 SNORA26.6-201ENST00000391256 115 ntBASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 AC026421.1-201ENST00000519101 163 ntBASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PHTF2Q8N3S3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PHTF2Q8N3S3 SNORA1.1-201ENST00000364671 133 ntBASIC2.86□□□□□ -1.95
PHTF2Q8N3S3 Y_RNA.388-201ENST00000383919 113 ntBASIC2.86□□□□□ -1.95
PHTF2Q8N3S3 RNU6-616P-201ENST00000384353 107 ntBASIC2.86□□□□□ -1.95
PHTF2Q8N3S3 MIR526A1-201ENST00000384897 85 ntBASIC2.86□□□□□ -1.95
PHTF2Q8N3S3 AL138827.1-201ENST00000402666 306 ntBASIC2.86□□□□□ -1.95
PHTF2Q8N3S3 SNORD88.1-201ENST00000408684 91 ntBASIC2.86□□□□□ -1.95
PHTF2Q8N3S3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.86□□□□□ -1.95
PHTF2Q8N3S3 SNORA74.3-201ENST00000517108 154 ntBASIC2.86□□□□□ -1.95
PHTF2Q8N3S3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.86□□□□□ -1.95
PHTF2Q8N3S3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 RNU1-138P-201ENST00000384093 164 ntBASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 RNU6-301P-201ENST00000384277 107 ntBASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 RNU6-913P-201ENST00000390913 95 ntBASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 RNA5SP21-201ENST00000410917 96 ntBASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 AC096949.1-201ENST00000412047 152 ntBASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 RNU7-43P-201ENST00000516554 64 ntBASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 MIR4529-201ENST00000578110 78 ntBASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms