Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL451046.2-201ENST00000403074 277 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 MIR548O-201ENST00000408583 114 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 RNU2-64P-201ENST00000411315 191 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 AL121914.1-201ENST00000450188 156 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 RNU4-57P-201ENST00000515980 135 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 RNU6-1219P-201ENST00000516143 112 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 RNU7-25P-201ENST00000516544 62 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 AC022559.1-201ENST00000520905 205 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 AC007751.1-201ENST00000529260 376 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 MIR3937-201ENST00000580135 106 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 AC004792.1-201ENST00000614523 137 ntBASIC1.5□□□□□ -2.17
VPS52Q8N1B4 SNORD26-201ENST00000384147 75 ntBASIC1.49□□□□□ -2.17
VPS52Q8N1B4 SNORD61-201ENST00000384252 73 ntBASIC1.49□□□□□ -2.17
VPS52Q8N1B4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.49□□□□□ -2.17
VPS52Q8N1B4 RNU2-70P-201ENST00000410718 179 ntBASIC1.49□□□□□ -2.17
VPS52Q8N1B4 RPL30P7-201ENST00000479312 323 ntBASIC1.49□□□□□ -2.17
VPS52Q8N1B4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.49□□□□□ -2.17
VPS52Q8N1B4 RNU6-504P-201ENST00000516568 104 ntBASIC1.49□□□□□ -2.17
VPS52Q8N1B4 RNU6-922P-201ENST00000516753 99 ntBASIC1.49□□□□□ -2.17
VPS52Q8N1B4 SNORA74.3-201ENST00000517108 154 ntBASIC1.49□□□□□ -2.17
VPS52Q8N1B4 AL512310.8-201ENST00000550183 120 ntBASIC1.49□□□□□ -2.17
VPS52Q8N1B4 MIR3664-201ENST00000579074 99 ntBASIC1.49□□□□□ -2.17
VPS52Q8N1B4 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
VPS52Q8N1B4 RNU6-682P-201ENST00000363843 106 ntBASIC1.48□□□□□ -2.17
VPS52Q8N1B4 Y_RNA.240-201ENST00000364469 95 ntBASIC1.48□□□□□ -2.17
VPS52Q8N1B4 RNU6-53P-201ENST00000365367 106 ntBASIC1.48□□□□□ -2.17
VPS52Q8N1B4 MIR518F-201ENST00000384973 87 ntBASIC1.48□□□□□ -2.17
VPS52Q8N1B4 SNORA79-201ENST00000408376 140 ntBASIC1.48□□□□□ -2.17
VPS52Q8N1B4 SNORD123-201ENST00000459473 70 ntBASIC1.48□□□□□ -2.17
VPS52Q8N1B4 RNA5SP102-201ENST00000516865 106 ntBASIC1.48□□□□□ -2.17
VPS52Q8N1B4 MIR4431-201ENST00000579990 94 ntBASIC1.48□□□□□ -2.17
VPS52Q8N1B4 AL357312.1-201ENST00000603879 298 ntBASIC1.48□□□□□ -2.17
VPS52Q8N1B4 MIR6078-201ENST00000611069 100 ntBASIC1.48□□□□□ -2.17
VPS52Q8N1B4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS52Q8N1B4 RNU6-643P-201ENST00000384018 107 ntBASIC1.47□□□□□ -2.17
VPS52Q8N1B4 AC015726.2-201ENST00000620112 122 ntBASIC1.47□□□□□ -2.17
VPS52Q8N1B4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.46□□□□□ -2.18
VPS52Q8N1B4 RNU6-978P-201ENST00000364371 103 ntBASIC1.46□□□□□ -2.18
VPS52Q8N1B4 MTND5P15-201ENST00000434246 349 ntBASIC1.46□□□□□ -2.18
VPS52Q8N1B4 RNU6-693P-201ENST00000516134 107 ntBASIC1.46□□□□□ -2.18
VPS52Q8N1B4 RNU6-182P-201ENST00000516970 105 ntBASIC1.46□□□□□ -2.18
VPS52Q8N1B4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
VPS52Q8N1B4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
VPS52Q8N1B4 SNORD115-28-201ENST00000363931 81 ntBASIC1.45□□□□□ -2.18
VPS52Q8N1B4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
VPS52Q8N1B4 U8.17-201ENST00000391292 132 ntBASIC1.45□□□□□ -2.18
VPS52Q8N1B4 RNU7-43P-201ENST00000516554 64 ntBASIC1.45□□□□□ -2.18
VPS52Q8N1B4 SNORA18.7-201ENST00000516910 131 ntBASIC1.45□□□□□ -2.18
VPS52Q8N1B4 RNU6-165P-201ENST00000517170 99 ntBASIC1.45□□□□□ -2.18
VPS52Q8N1B4 MIR378D2-201ENST00000580636 98 ntBASIC1.45□□□□□ -2.18
VPS52Q8N1B4 FTX_2.1-201ENST00000618816 94 ntBASIC1.45□□□□□ -2.18
VPS52Q8N1B4 AL121890.5-201ENST00000620848 304 ntBASIC1.45□□□□□ -2.18
VPS52Q8N1B4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS52Q8N1B4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
VPS52Q8N1B4 AC087499.4-201ENST00000448505 178 ntBASIC1.44□□□□□ -2.18
VPS52Q8N1B4 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
VPS52Q8N1B4 RNU6-861P-201ENST00000516745 106 ntBASIC1.44□□□□□ -2.18
VPS52Q8N1B4 RNU6-1270P-201ENST00000517128 108 ntBASIC1.44□□□□□ -2.18
VPS52Q8N1B4 MIR4452-201ENST00000583004 71 ntBASIC1.44□□□□□ -2.18
VPS52Q8N1B4 AL365205.2-201ENST00000594586 68 ntBASIC1.44□□□□□ -2.18
VPS52Q8N1B4 Y_RNA.37-201ENST00000362606 108 ntBASIC1.43□□□□□ -2.18
VPS52Q8N1B4 Y_RNA.542-201ENST00000384641 111 ntBASIC1.43□□□□□ -2.18
VPS52Q8N1B4 RNU6-907P-201ENST00000390924 102 ntBASIC1.43□□□□□ -2.18
VPS52Q8N1B4 RNU5E-9P-201ENST00000411164 104 ntBASIC1.43□□□□□ -2.18
VPS52Q8N1B4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS52Q8N1B4 RNU2-13P-201ENST00000515909 113 ntBASIC1.43□□□□□ -2.18
VPS52Q8N1B4 SNORD111.1-201ENST00000516421 86 ntBASIC1.43□□□□□ -2.18
VPS52Q8N1B4 SNORD116-25-201ENST00000516517 92 ntBASIC1.43□□□□□ -2.18
VPS52Q8N1B4 MIR548AR-201ENST00000582191 57 ntBASIC1.43□□□□□ -2.18
VPS52Q8N1B4 SNORA4-201ENST00000584302 138 ntBASIC1.43□□□□□ -2.18
VPS52Q8N1B4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS52Q8N1B4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS52Q8N1B4 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 Y_RNA.441-201ENST00000384123 112 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 RNU6-939P-201ENST00000384634 107 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 MIR489-201ENST00000384923 84 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
VPS52Q8N1B4 RNU6-938P-201ENST00000411285 103 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 SEPT7P4-201ENST00000437076 306 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 snoU13.18-201ENST00000459483 104 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 Y_RNA.662-201ENST00000516028 97 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 RNU7-181P-201ENST00000517234 74 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 MIR4764-201ENST00000580680 88 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 MIR3668-201ENST00000582138 75 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 AC098479.1-201ENST00000609225 154 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 AC134878.1-201ENST00000619901 243 ntBASIC1.42□□□□□ -2.18
VPS52Q8N1B4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS52Q8N1B4 RNU4-84P-201ENST00000364200 139 ntBASIC1.41□□□□□ -2.18
VPS52Q8N1B4 SNORA1.2-201ENST00000365189 134 ntBASIC1.41□□□□□ -2.18
VPS52Q8N1B4 RNU6-1292P-201ENST00000383856 107 ntBASIC1.41□□□□□ -2.18
VPS52Q8N1B4 Y_RNA.410-201ENST00000383992 113 ntBASIC1.41□□□□□ -2.18
VPS52Q8N1B4 SNORA1-201ENST00000384107 130 ntBASIC1.41□□□□□ -2.18
VPS52Q8N1B4 SNORD28B-201ENST00000390993 75 ntBASIC1.41□□□□□ -2.18
VPS52Q8N1B4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS52Q8N1B4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS52Q8N1B4 AF228730.3-201ENST00000436691 102 ntBASIC1.41□□□□□ -2.18
VPS52Q8N1B4 AC004223.1-201ENST00000479840 271 ntBASIC1.41□□□□□ -2.18
VPS52Q8N1B4 AC107027.2-201ENST00000512197 115 ntBASIC1.41□□□□□ -2.18
VPS52Q8N1B4 AL096861.1-201ENST00000610899 123 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms