Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RNA5SP274-201ENST00000410484 108 ntBASIC2.86□□□□□ -1.95
SIX5Q8N196 RPS23P4-201ENST00000487908 423 ntBASIC2.86□□□□□ -1.95
SIX5Q8N196 MIR4529-201ENST00000578110 78 ntBASIC2.86□□□□□ -1.95
SIX5Q8N196 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SIX5Q8N196 Y_RNA.299-201ENST00000364973 94 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 SNORA51.10-201ENST00000384418 136 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 RNU6-905P-201ENST00000384434 107 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 Y_RNA.507-201ENST00000384500 99 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 Y_RNA.531-201ENST00000384589 121 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 SNORA67.4-201ENST00000384688 142 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 RNU6-816P-201ENST00000390914 107 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 RNU6-1268P-201ENST00000391214 107 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 RNU6-1239P-201ENST00000391310 107 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 SNORA3.2-201ENST00000408221 125 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 RNA5SP21-201ENST00000410917 96 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 AL512326.2-201ENST00000426359 151 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 RNU7-113P-201ENST00000459273 62 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 RNU7-45P-201ENST00000459460 63 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 SNORD123-201ENST00000459473 70 ntBASIC2.85□□□□□ -1.95
SIX5Q8N196 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
SIX5Q8N196 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SIX5Q8N196 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SIX5Q8N196 RNU6-1319P-201ENST00000390855 104 ntBASIC2.84□□□□□ -1.95
SIX5Q8N196 RNU6-747P-201ENST00000390928 104 ntBASIC2.84□□□□□ -1.95
SIX5Q8N196 RNU6-241P-201ENST00000391148 104 ntBASIC2.84□□□□□ -1.95
SIX5Q8N196 RNU6-177P-201ENST00000411257 104 ntBASIC2.84□□□□□ -1.95
SIX5Q8N196 snoU13.15-201ENST00000459407 104 ntBASIC2.84□□□□□ -1.95
SIX5Q8N196 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX5Q8N196 DNAJC19P9-201ENST00000555084 351 ntBASIC2.84□□□□□ -1.95
SIX5Q8N196 MIR4446-201ENST00000578505 67 ntBASIC2.84□□□□□ -1.95
SIX5Q8N196 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SIX5Q8N196 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.83□□□□□ -1.96
SIX5Q8N196 MIR590-201ENST00000385008 97 ntBASIC2.83□□□□□ -1.96
SIX5Q8N196 UQCRHP3-201ENST00000451503 251 ntBASIC2.83□□□□□ -1.96
SIX5Q8N196 AC099513.1-201ENST00000490423 301 ntBASIC2.83□□□□□ -1.96
SIX5Q8N196 MIR5194-201ENST00000582634 120 ntBASIC2.83□□□□□ -1.96
SIX5Q8N196 Y_RNA.818-201ENST00000618813 71 ntBASIC2.83□□□□□ -1.96
SIX5Q8N196 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.83□□□□□ -1.96
SIX5Q8N196 ZNF658B-202ENST00000615961 3375 ntBASIC2.83□□□□□ -1.96
SIX5Q8N196 MIR424-201ENST00000362227 98 ntBASIC2.82□□□□□ -1.96
SIX5Q8N196 Y_RNA.78-201ENST00000362970 110 ntBASIC2.82□□□□□ -1.96
SIX5Q8N196 RNU6-640P-201ENST00000363693 105 ntBASIC2.82□□□□□ -1.96
SIX5Q8N196 MIR526A1-201ENST00000384897 85 ntBASIC2.82□□□□□ -1.96
SIX5Q8N196 POLR2J4-204ENST00000418424 324 ntBASIC2.82□□□□□ -1.96
SIX5Q8N196 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.82□□□□□ -1.96
SIX5Q8N196 RNU6-826P-201ENST00000516827 104 ntBASIC2.82□□□□□ -1.96
SIX5Q8N196 FAM106DP-201ENST00000586416 501 ntBASIC2.82□□□□□ -1.96
SIX5Q8N196 AL513534.2-201ENST00000603836 250 ntBASIC2.82□□□□□ -1.96
SIX5Q8N196 FAM71BP1-201ENST00000604431 523 ntBASIC2.82□□□□□ -1.96
SIX5Q8N196 AC243994.1-201ENST00000618627 109 ntBASIC2.82□□□□□ -1.96
SIX5Q8N196 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.82□□□□□ -1.96
SIX5Q8N196 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.82□□□□□ -1.96
SIX5Q8N196 RNU6-661P-201ENST00000362409 107 ntBASIC2.81□□□□□ -1.96
SIX5Q8N196 SNORA22.1-201ENST00000362701 134 ntBASIC2.81□□□□□ -1.96
SIX5Q8N196 SNORA3A-201ENST00000364113 130 ntBASIC2.81□□□□□ -1.96
SIX5Q8N196 RNU4-36P-201ENST00000364294 144 ntBASIC2.81□□□□□ -1.96
SIX5Q8N196 SNORA46-201ENST00000384762 135 ntBASIC2.81□□□□□ -1.96
SIX5Q8N196 RNA5SP450-201ENST00000411206 102 ntBASIC2.81□□□□□ -1.96
SIX5Q8N196 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.81□□□□□ -1.96
SIX5Q8N196 SNORA31.4-201ENST00000516049 129 ntBASIC2.81□□□□□ -1.96
SIX5Q8N196 RN7SKP43-201ENST00000516173 320 ntBASIC2.81□□□□□ -1.96
SIX5Q8N196 MIR548AR-201ENST00000582191 57 ntBASIC2.81□□□□□ -1.96
SIX5Q8N196 MIR4791-201ENST00000607666 84 ntBASIC2.81□□□□□ -1.96
SIX5Q8N196 SNORD28B-201ENST00000390993 75 ntBASIC2.8□□□□□ -1.96
SIX5Q8N196 SNORD77B-201ENST00000391112 67 ntBASIC2.8□□□□□ -1.96
SIX5Q8N196 SNORA19.1-201ENST00000410656 129 ntBASIC2.8□□□□□ -1.96
SIX5Q8N196 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.8□□□□□ -1.96
SIX5Q8N196 RN7SL633P-201ENST00000488974 297 ntBASIC2.8□□□□□ -1.96
SIX5Q8N196 SNORA31.15-201ENST00000516771 132 ntBASIC2.8□□□□□ -1.96
SIX5Q8N196 MIR203B-201ENST00000636080 86 ntBASIC2.8□□□□□ -1.96
SIX5Q8N196 FO624990.1-201ENST00000636373 85 ntBASIC2.8□□□□□ -1.96
SIX5Q8N196 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SIX5Q8N196 Y_RNA.155-201ENST00000363632 101 ntBASIC2.79□□□□□ -1.96
SIX5Q8N196 Y_RNA.171-201ENST00000363760 102 ntBASIC2.79□□□□□ -1.96
SIX5Q8N196 RNU4-69P-201ENST00000410677 143 ntBASIC2.79□□□□□ -1.96
SIX5Q8N196 RNA5SP100-201ENST00000410903 110 ntBASIC2.79□□□□□ -1.96
SIX5Q8N196 RNA5SP59-201ENST00000410922 110 ntBASIC2.79□□□□□ -1.96
SIX5Q8N196 RNA5SP57-201ENST00000459463 123 ntBASIC2.79□□□□□ -1.96
SIX5Q8N196 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.79□□□□□ -1.96
SIX5Q8N196 RNU6-109P-201ENST00000516364 107 ntBASIC2.79□□□□□ -1.96
SIX5Q8N196 RNU6-184P-201ENST00000516514 107 ntBASIC2.79□□□□□ -1.96
SIX5Q8N196 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.79□□□□□ -1.96
SIX5Q8N196 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.79□□□□□ -1.96
SIX5Q8N196 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.79□□□□□ -1.96
SIX5Q8N196 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.79□□□□□ -1.96
SIX5Q8N196 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.79□□□□□ -1.96
SIX5Q8N196 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SIX5Q8N196 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
SIX5Q8N196 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SIX5Q8N196 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
SIX5Q8N196 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SIX5Q8N196 RNU1-138P-201ENST00000384093 164 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 SNORA24-201ENST00000384096 131 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 Y_RNA.537-201ENST00000384626 109 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 RPL23AP6-201ENST00000446637 472 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 RNU7-73P-201ENST00000458743 63 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 AC113410.1-201ENST00000505029 247 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 RNA5SP33-201ENST00000516687 98 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 SNORA31.17-201ENST00000516953 127 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms