Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR3945-201ENST00000581853 98 ntBASIC3.33□□□□□ -1.88
SCUBE3Q8IX30 AC069114.2-201ENST00000604699 304 ntBASIC3.33□□□□□ -1.88
SCUBE3Q8IX30 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.33□□□□□ -1.88
SCUBE3Q8IX30 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SCUBE3Q8IX30 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCUBE3Q8IX30 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCUBE3Q8IX30 MAPK10-362ENST00000641864 4484 ntBASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 Y_RNA.448-201ENST00000384185 108 ntBASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 RNU6-1067P-201ENST00000384752 107 ntBASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 AC090255.1-201ENST00000495779 349 ntBASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 UBL5P2-201ENST00000583788 219 ntBASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 U1.23-201ENST00000610293 146 ntBASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 MIR8055-201ENST00000610739 97 ntBASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 RNU1-68P-201ENST00000615382 146 ntBASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 U1.39-201ENST00000621562 146 ntBASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCUBE3Q8IX30 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SCUBE3Q8IX30 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SCUBE3Q8IX30 Y_RNA.173-201ENST00000363776 113 ntBASIC3.31□□□□□ -1.88
SCUBE3Q8IX30 SNORA5B-201ENST00000363786 132 ntBASIC3.31□□□□□ -1.88
SCUBE3Q8IX30 SNORD38.2-201ENST00000384470 69 ntBASIC3.31□□□□□ -1.88
SCUBE3Q8IX30 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.31□□□□□ -1.88
SCUBE3Q8IX30 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.31□□□□□ -1.88
SCUBE3Q8IX30 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.31□□□□□ -1.88
SCUBE3Q8IX30 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
SCUBE3Q8IX30 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.31□□□□□ -1.88
SCUBE3Q8IX30 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 SNORD56.3-201ENST00000363507 71 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 Y_RNA.354-201ENST00000365448 111 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 SNORA7.4-201ENST00000384249 137 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 RNU6-480P-201ENST00000384332 107 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 Y_RNA.537-201ENST00000384626 109 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 MIR181B2-201ENST00000385004 89 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 SNORD28B-201ENST00000390993 75 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 RNU6-447P-201ENST00000410293 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 RNU6-1118P-201ENST00000410382 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 RNU6-1076P-201ENST00000410397 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 RNU6-355P-201ENST00000410427 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 RNU6-791P-201ENST00000410467 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 RNU6-705P-201ENST00000410601 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 RNU6-1100P-201ENST00000410691 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 RNU6-860P-201ENST00000410860 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 RNU6-1217P-201ENST00000411276 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 RNU6-785P-201ENST00000411324 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 HMGN1P33-201ENST00000432945 451 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 SNORD123-201ENST00000459473 70 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 SNORD67.1-201ENST00000516618 108 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 MIR3616-201ENST00000584070 92 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 U6.90-201ENST00000614007 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 U4atac.1-201ENST00000618345 95 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 AC012676.2-201ENST00000619258 186 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 U6.70-201ENST00000620287 104 ntBASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCUBE3Q8IX30 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.29□□□□□ -1.88
SCUBE3Q8IX30 MIR422A-201ENST00000362286 90 ntBASIC3.29□□□□□ -1.88
SCUBE3Q8IX30 SNORD21-201ENST00000383953 95 ntBASIC3.29□□□□□ -1.88
SCUBE3Q8IX30 SNORD15B-201ENST00000384714 146 ntBASIC3.29□□□□□ -1.88
SCUBE3Q8IX30 RNU6-1086P-201ENST00000410930 100 ntBASIC3.29□□□□□ -1.88
SCUBE3Q8IX30 AC234781.5-201ENST00000508429 271 ntBASIC3.29□□□□□ -1.88
SCUBE3Q8IX30 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
SCUBE3Q8IX30 RNU7-79P-201ENST00000516082 62 ntBASIC3.29□□□□□ -1.88
SCUBE3Q8IX30 MTND5P40-201ENST00000559945 246 ntBASIC3.29□□□□□ -1.88
SCUBE3Q8IX30 AC026271.5-201ENST00000577873 130 ntBASIC3.29□□□□□ -1.88
SCUBE3Q8IX30 FAM106DP-201ENST00000586416 501 ntBASIC3.29□□□□□ -1.88
SCUBE3Q8IX30 Y_RNA.98-201ENST00000363109 102 ntBASIC3.28□□□□□ -1.88
SCUBE3Q8IX30 SNORD114-10-201ENST00000363409 72 ntBASIC3.28□□□□□ -1.88
SCUBE3Q8IX30 RNA5SP138-201ENST00000365098 114 ntBASIC3.28□□□□□ -1.88
SCUBE3Q8IX30 RNU6-1321P-201ENST00000390905 107 ntBASIC3.28□□□□□ -1.88
SCUBE3Q8IX30 RNU6-129P-201ENST00000391022 107 ntBASIC3.28□□□□□ -1.88
SCUBE3Q8IX30 snoU13.16-201ENST00000459350 104 ntBASIC3.28□□□□□ -1.88
SCUBE3Q8IX30 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.28□□□□□ -1.88
SCUBE3Q8IX30 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.28□□□□□ -1.88
SCUBE3Q8IX30 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.28□□□□□ -1.88
SCUBE3Q8IX30 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.27□□□□□ -1.89
SCUBE3Q8IX30 RNU6-1094P-201ENST00000362416 104 ntBASIC3.27□□□□□ -1.89
SCUBE3Q8IX30 RNA5SP383-201ENST00000362934 120 ntBASIC3.27□□□□□ -1.89
SCUBE3Q8IX30 SNORD115-3-201ENST00000363100 82 ntBASIC3.27□□□□□ -1.89
SCUBE3Q8IX30 RNU6-590P-201ENST00000365039 107 ntBASIC3.27□□□□□ -1.89
SCUBE3Q8IX30 RNU6-1031P-201ENST00000384773 107 ntBASIC3.27□□□□□ -1.89
SCUBE3Q8IX30 RNU6-519P-201ENST00000410590 108 ntBASIC3.27□□□□□ -1.89
SCUBE3Q8IX30 AC093850.1-201ENST00000454121 251 ntBASIC3.27□□□□□ -1.89
SCUBE3Q8IX30 AC114801.3-201ENST00000510231 177 ntBASIC3.27□□□□□ -1.89
SCUBE3Q8IX30 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.27□□□□□ -1.89
SCUBE3Q8IX30 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCUBE3Q8IX30 RNU1-58P-201ENST00000362413 163 ntBASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 Y_RNA.168-201ENST00000363740 102 ntBASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 SNORD67-201ENST00000390833 111 ntBASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 MIR1236-201ENST00000408340 102 ntBASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 RNU7-153P-201ENST00000516455 62 ntBASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 MIR5094-201ENST00000578766 85 ntBASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 AL033523.1-201ENST00000605153 153 ntBASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 AC020891.4-201ENST00000605745 93 ntBASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 AC105081.1-201ENST00000617727 106 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms