Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SNRPGP19-201ENST00000603826 189 ntBASIC2.01□□□□□ -2.09
VRK3Q8IV63 MIR203B-201ENST00000636080 86 ntBASIC2.01□□□□□ -2.09
VRK3Q8IV63 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VRK3Q8IV63 U8.2-201ENST00000363156 134 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 SNORA70B-201ENST00000384210 135 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 RNU1-148P-201ENST00000384472 162 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 Y_RNA.544-201ENST00000384650 113 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 MIR548D2-201ENST00000384955 97 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 U8.17-201ENST00000391292 132 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 AC090255.1-201ENST00000495779 349 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 RNA5SP137-201ENST00000516833 135 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 SNORA18.7-201ENST00000516910 131 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2□□□□□ -2.09
VRK3Q8IV63 MIR4778-201ENST00000577635 80 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 AC078899.2-201ENST00000595282 212 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 AC022202.1-201ENST00000613515 211 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 AC015726.2-201ENST00000620112 122 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2□□□□□ -2.09
VRK3Q8IV63 MIR219B-201ENST00000637023 88 ntBASIC2□□□□□ -2.09
VRK3Q8IV63 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
VRK3Q8IV63 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VRK3Q8IV63 RNU6-833P-201ENST00000363486 107 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 SNORA63D-201ENST00000364359 132 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 SNORA51.10-201ENST00000384418 136 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 Y_RNA.494-201ENST00000384432 111 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
VRK3Q8IV63 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.99□□□□□ -2.09
VRK3Q8IV63 AC069257.2-201ENST00000441819 155 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.99□□□□□ -2.09
VRK3Q8IV63 SNORA40.13-201ENST00000516379 120 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 RNU6-158P-201ENST00000517104 100 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 MIR4648-201ENST00000580107 72 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 MIR3163-201ENST00000581592 73 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 HSPE1P19-201ENST00000603327 295 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 AC069114.2-201ENST00000604699 304 ntBASIC1.99□□□□□ -2.09
VRK3Q8IV63 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-34-201ENST00000362441 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-12-201ENST00000362583 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-29-201ENST00000362834 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-9-201ENST00000362912 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-21-201ENST00000362963 81 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-14-201ENST00000363090 81 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-13-201ENST00000363358 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-41-201ENST00000363608 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-11-201ENST00000363616 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-5-201ENST00000363633 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-39-201ENST00000363694 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-4-201ENST00000363810 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-16-201ENST00000363887 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-6-201ENST00000363942 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-42-201ENST00000364273 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-15-201ENST00000364809 81 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-1-201ENST00000364961 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-26-201ENST00000365067 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-10-201ENST00000365073 81 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 RNA5SP37-201ENST00000365420 130 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-43-201ENST00000365503 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-36-201ENST00000365629 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 RNU1-52P-201ENST00000384190 164 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORA27-201ENST00000384323 126 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 BX510359.4-201ENST00000423750 193 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 HMGN2P38-201ENST00000423806 265 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 AC015922.2-201ENST00000435593 184 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.98□□□□□ -2.09
VRK3Q8IV63 RNU6-998P-201ENST00000515894 101 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 AC022523.2-201ENST00000561045 150 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 SNORD115-40-201ENST00000606510 82 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 Y_RNA.818-201ENST00000618813 71 ntBASIC1.98□□□□□ -2.09
VRK3Q8IV63 RNA5SP432-201ENST00000362480 116 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 RNU6-424P-201ENST00000384367 105 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 RNU6-163P-201ENST00000384396 106 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 U8.16-201ENST00000391279 133 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 MIR1283-2-201ENST00000408621 87 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 RNA5SP338-201ENST00000410495 85 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 RN7SKP200-201ENST00000410564 320 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 RN7SKP192-201ENST00000411291 327 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 HSPE1P9-201ENST00000440046 311 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 RNU7-96P-201ENST00000459535 64 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 AC025033.1-201ENST00000463883 194 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 RNU6-904P-201ENST00000516206 101 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 AL162726.3-218ENST00000636401 95 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VRK3Q8IV63 AL596211.1-201ENST00000569873 2277 ntBASIC1.97□□□□□ -2.09
VRK3Q8IV63 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
VRK3Q8IV63 SNORD115-3-201ENST00000363100 82 ntBASIC1.96□□□□□ -2.1
VRK3Q8IV63 SNORD73B-201ENST00000364394 72 ntBASIC1.96□□□□□ -2.1
VRK3Q8IV63 RNU6-49P-201ENST00000384256 107 ntBASIC1.96□□□□□ -2.1
VRK3Q8IV63 MIR590-201ENST00000385008 97 ntBASIC1.96□□□□□ -2.1
VRK3Q8IV63 RNA5SP144-201ENST00000410846 116 ntBASIC1.96□□□□□ -2.1
VRK3Q8IV63 RNA5SP168-201ENST00000516642 112 ntBASIC1.96□□□□□ -2.1
VRK3Q8IV63 MIR5094-201ENST00000578766 85 ntBASIC1.96□□□□□ -2.1
VRK3Q8IV63 MIR4658-201ENST00000584344 65 ntBASIC1.96□□□□□ -2.1
VRK3Q8IV63 AC245884.12-201ENST00000615364 59 ntBASIC1.96□□□□□ -2.1
VRK3Q8IV63 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms