Protein–RNA interactions for Protein: Q86UA6

RPAIN, RPA-interacting protein, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAINQ86UA6 Y_RNA.587-201ENST00000391210 103 ntBASIC1.03□□□□□ -2.24
RPAINQ86UA6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.03□□□□□ -2.24
RPAINQ86UA6 RPL39P39-201ENST00000455840 151 ntBASIC1.03□□□□□ -2.24
RPAINQ86UA6 RNU6-830P-201ENST00000516353 107 ntBASIC1.03□□□□□ -2.24
RPAINQ86UA6 SNORA18.7-201ENST00000516910 131 ntBASIC1.03□□□□□ -2.24
RPAINQ86UA6 AL162730.1-201ENST00000605734 292 ntBASIC1.03□□□□□ -2.24
RPAINQ86UA6 Pinc.1-201ENST00000616452 154 ntBASIC1.03□□□□□ -2.24
RPAINQ86UA6 AL442644.1-201ENST00000454390 3105 ntBASIC1.03□□□□□ -2.24
RPAINQ86UA6 Y_RNA.229-201ENST00000364347 113 ntBASIC1.02□□□□□ -2.25
RPAINQ86UA6 RNU6-702P-201ENST00000364982 107 ntBASIC1.02□□□□□ -2.25
RPAINQ86UA6 Y_RNA.304-201ENST00000365011 112 ntBASIC1.02□□□□□ -2.25
RPAINQ86UA6 Y_RNA.452-201ENST00000384202 108 ntBASIC1.02□□□□□ -2.25
RPAINQ86UA6 RNU6-574P-201ENST00000384265 107 ntBASIC1.02□□□□□ -2.25
RPAINQ86UA6 RNU6-463P-201ENST00000384340 107 ntBASIC1.02□□□□□ -2.25
RPAINQ86UA6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.02□□□□□ -2.25
RPAINQ86UA6 SNORD123-201ENST00000459473 70 ntBASIC1.02□□□□□ -2.25
RPAINQ86UA6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.02□□□□□ -2.25
RPAINQ86UA6 SNORD77.4-201ENST00000516158 81 ntBASIC1.02□□□□□ -2.25
RPAINQ86UA6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.02□□□□□ -2.25
RPAINQ86UA6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RPAINQ86UA6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.02□□□□□ -2.25
RPAINQ86UA6 Y_RNA.292-201ENST00000364904 97 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 Y_RNA.350-201ENST00000365409 98 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 Y_RNA.477-201ENST00000384352 108 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 MIR19B1-201ENST00000384829 87 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 MIR193B-201ENST00000384907 83 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 MIR520C-201ENST00000385005 87 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 RNU2-64P-201ENST00000411315 191 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.01□□□□□ -2.25
RPAINQ86UA6 AC048334.1-201ENST00000477975 159 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 MTND1P19-201ENST00000511780 315 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 RN7SKP164-201ENST00000516138 266 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 MIR4764-201ENST00000580680 88 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 MIR3149-201ENST00000584629 83 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 MIR3192-201ENST00000584920 77 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 AC011921.3-201ENST00000605540 361 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 AL096861.1-201ENST00000610899 123 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 AL442067.1-201ENST00000613261 223 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 7SK.10-201ENST00000621414 298 ntBASIC1.01□□□□□ -2.25
RPAINQ86UA6 Y_RNA.20-201ENST00000362479 113 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 RNU6-653P-201ENST00000363074 106 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 Y_RNA.193-201ENST00000363979 102 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 SNORD27-201ENST00000363981 72 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 snoU2_19.4-201ENST00000364329 80 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 Y_RNA.486-201ENST00000384398 107 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1□□□□□ -2.25
RPAINQ86UA6 ACA64.5-201ENST00000516207 127 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 SNORD111.1-201ENST00000516421 86 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 RNU7-43P-201ENST00000516554 64 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 MIR4662B-201ENST00000579498 81 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 MIR4714-201ENST00000580728 77 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 MIR3128-201ENST00000581957 66 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 MIR548AR-201ENST00000582191 57 ntBASIC1□□□□□ -2.25
RPAINQ86UA6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RPAINQ86UA6 Y_RNA.65-201ENST00000362846 100 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 Y_RNA.144-201ENST00000363521 113 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 Y_RNA.262-201ENST00000364641 102 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 Y_RNA.478-201ENST00000384358 107 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 Y_RNA.539-201ENST00000384635 107 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 MT-TT-201ENST00000387460 66 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 U8.17-201ENST00000391292 132 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 SNORD58.1-201ENST00000391313 66 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 AC245047.7-201ENST00000440265 293 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 SCARNA8-201ENST00000515924 131 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 SNORA31.2-201ENST00000516019 134 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 SNORA31.4-201ENST00000516049 129 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 Y_RNA.666-201ENST00000516187 112 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 Y_RNA.680-201ENST00000516441 93 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 RNU6-453P-201ENST00000516819 85 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 MIR4653-201ENST00000585107 83 ntBASIC0.99□□□□□ -2.25
RPAINQ86UA6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.99□□□□□ -2.25
RPAINQ86UA6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.98□□□□□ -2.25
RPAINQ86UA6 RNY4P28-201ENST00000365281 93 ntBASIC0.98□□□□□ -2.25
RPAINQ86UA6 RNY3P5-201ENST00000384127 102 ntBASIC0.98□□□□□ -2.25
RPAINQ86UA6 Y_RNA.447-201ENST00000384184 113 ntBASIC0.98□□□□□ -2.25
RPAINQ86UA6 Y_RNA.547-201ENST00000384654 119 ntBASIC0.98□□□□□ -2.25
RPAINQ86UA6 MIR146A-201ENST00000385201 99 ntBASIC0.98□□□□□ -2.25
RPAINQ86UA6 MIR616-201ENST00000385293 97 ntBASIC0.98□□□□□ -2.25
RPAINQ86UA6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.98□□□□□ -2.25
RPAINQ86UA6 snoU13.25-201ENST00000458945 104 ntBASIC0.98□□□□□ -2.25
RPAINQ86UA6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.98□□□□□ -2.25
RPAINQ86UA6 RNU4-57P-201ENST00000515980 135 ntBASIC0.98□□□□□ -2.25
RPAINQ86UA6 MIR1273G-201ENST00000577677 100 ntBASIC0.98□□□□□ -2.25
RPAINQ86UA6 AC015726.2-201ENST00000620112 122 ntBASIC0.98□□□□□ -2.25
RPAINQ86UA6 AC008133.2-201ENST00000624540 351 ntBASIC0.98□□□□□ -2.25
RPAINQ86UA6 Y_RNA.307-201ENST00000365022 117 ntBASIC0.97□□□□□ -2.25
RPAINQ86UA6 SNORD28B-201ENST00000390993 75 ntBASIC0.97□□□□□ -2.25
RPAINQ86UA6 RNU6-1228P-201ENST00000391014 107 ntBASIC0.97□□□□□ -2.25
RPAINQ86UA6 AL606845.1-201ENST00000404881 255 ntBASIC0.97□□□□□ -2.25
RPAINQ86UA6 MIR548O-201ENST00000408583 114 ntBASIC0.97□□□□□ -2.25
RPAINQ86UA6 RNU2-55P-201ENST00000411146 174 ntBASIC0.97□□□□□ -2.25
RPAINQ86UA6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.97□□□□□ -2.25
RPAINQ86UA6 SNRPGP8-201ENST00000454064 226 ntBASIC0.97□□□□□ -2.25
RPAINQ86UA6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.97□□□□□ -2.25
RPAINQ86UA6 RNU7-41P-201ENST00000515917 61 ntBASIC0.97□□□□□ -2.25
RPAINQ86UA6 RNU6-1023P-201ENST00000516137 106 ntBASIC0.97□□□□□ -2.25
RPAINQ86UA6 RNU7-25P-201ENST00000516544 62 ntBASIC0.97□□□□□ -2.25
RPAINQ86UA6 RNU6-126P-201ENST00000516685 103 ntBASIC0.97□□□□□ -2.25
RPAINQ86UA6 RNU6-365P-201ENST00000517113 106 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms