Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC024614.2-201ENST00000577584 372 ntBASIC2.45□□□□□ -2.02
UBE3DQ7Z6J8 AC021506.2-201ENST00000612354 169 ntBASIC2.45□□□□□ -2.02
UBE3DQ7Z6J8 MIR6841-201ENST00000637129 72 ntBASIC2.45□□□□□ -2.02
UBE3DQ7Z6J8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 Z82195.2-201ENST00000612348 18351 ntBASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 RNU6-363P-201ENST00000362895 105 ntBASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 Y_RNA.107-201ENST00000363190 121 ntBASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 RNU6-1131P-201ENST00000364955 107 ntBASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 RNU6-296P-201ENST00000384608 107 ntBASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 AL512326.2-201ENST00000426359 151 ntBASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 RNU7-113P-201ENST00000459273 62 ntBASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 RNA5SP437-201ENST00000517249 129 ntBASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 MIR4694-201ENST00000578534 80 ntBASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 MIR3618-201ENST00000580330 88 ntBASIC2.44□□□□□ -2.02
UBE3DQ7Z6J8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.43□□□□□ -2.02
UBE3DQ7Z6J8 RNY3P2-201ENST00000362918 102 ntBASIC2.43□□□□□ -2.02
UBE3DQ7Z6J8 MIR516B2-201ENST00000385190 85 ntBASIC2.43□□□□□ -2.02
UBE3DQ7Z6J8 SNORD77B-201ENST00000391112 67 ntBASIC2.43□□□□□ -2.02
UBE3DQ7Z6J8 Y_RNA.601-201ENST00000410500 113 ntBASIC2.43□□□□□ -2.02
UBE3DQ7Z6J8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
UBE3DQ7Z6J8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
UBE3DQ7Z6J8 MIR424-201ENST00000362227 98 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 SNORA22.1-201ENST00000362701 134 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 Y_RNA.466-201ENST00000384294 113 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 Y_RNA.537-201ENST00000384626 109 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 SNORA19.1-201ENST00000410656 129 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 RNA5SP501-201ENST00000410990 112 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 RNA5SP184-201ENST00000411071 108 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 RNU7-67P-201ENST00000459003 62 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 AC113410.1-201ENST00000505029 247 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 SCARNA23-201ENST00000516060 130 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 RNU6-109P-201ENST00000516364 107 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 RNU6-184P-201ENST00000516514 107 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 SNORA31.15-201ENST00000516771 132 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.42□□□□□ -2.02
UBE3DQ7Z6J8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 SNORA5B-201ENST00000363786 132 ntBASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 SNORD73B-201ENST00000364394 72 ntBASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 RNU6-733P-201ENST00000410759 104 ntBASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 RN7SKP192-201ENST00000411291 327 ntBASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 RNA5SP270-201ENST00000411361 118 ntBASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 AC096949.1-201ENST00000412047 152 ntBASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 SNORD123-201ENST00000459473 70 ntBASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 MIR203B-201ENST00000636080 86 ntBASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.41□□□□□ -2.02
UBE3DQ7Z6J8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
UBE3DQ7Z6J8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
UBE3DQ7Z6J8 Y_RNA.96-201ENST00000363092 109 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 RNU6-1099P-201ENST00000363533 107 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 RNU4-67P-201ENST00000364569 141 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 RNU6-409P-201ENST00000384114 104 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 RNU6-49P-201ENST00000384256 107 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 AC099513.1-201ENST00000490423 301 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 RNA5SP320-201ENST00000516263 124 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 MIR4658-201ENST00000584344 65 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 AL442128.1-201ENST00000615151 90 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 AC243994.1-201ENST00000618627 109 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 SNORD3E-202ENST00000627253 216 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 AC095038.3-201ENST00000634439 195 ntBASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.4□□□□□ -2.03
UBE3DQ7Z6J8 Y_RNA.155-201ENST00000363632 101 ntBASIC2.39□□□□□ -2.03
UBE3DQ7Z6J8 MIR27B-201ENST00000385129 97 ntBASIC2.39□□□□□ -2.03
UBE3DQ7Z6J8 SNORA26.6-201ENST00000391256 115 ntBASIC2.39□□□□□ -2.03
UBE3DQ7Z6J8 snoU13.16-201ENST00000459350 104 ntBASIC2.39□□□□□ -2.03
UBE3DQ7Z6J8 RNU6-1018P-201ENST00000516577 106 ntBASIC2.39□□□□□ -2.03
UBE3DQ7Z6J8 RNU6-958P-201ENST00000516995 106 ntBASIC2.39□□□□□ -2.03
UBE3DQ7Z6J8 RNU6-844P-201ENST00000517175 102 ntBASIC2.39□□□□□ -2.03
UBE3DQ7Z6J8 AL020996.3-201ENST00000606617 222 ntBASIC2.39□□□□□ -2.03
UBE3DQ7Z6J8 MALAT1.1-201ENST00000618249 95 ntBASIC2.39□□□□□ -2.03
UBE3DQ7Z6J8 MIR6717-201ENST00000622747 73 ntBASIC2.39□□□□□ -2.03
UBE3DQ7Z6J8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
UBE3DQ7Z6J8 RNU6-1123P-201ENST00000362347 106 ntBASIC2.38□□□□□ -2.03
UBE3DQ7Z6J8 RNA5SP68-201ENST00000363885 119 ntBASIC2.38□□□□□ -2.03
UBE3DQ7Z6J8 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
UBE3DQ7Z6J8 Y_RNA.360-201ENST00000365512 102 ntBASIC2.38□□□□□ -2.03
UBE3DQ7Z6J8 Y_RNA.377-201ENST00000365644 108 ntBASIC2.38□□□□□ -2.03
UBE3DQ7Z6J8 MIR488-201ENST00000365739 83 ntBASIC2.38□□□□□ -2.03
UBE3DQ7Z6J8 MIR196B-201ENST00000384852 84 ntBASIC2.38□□□□□ -2.03
UBE3DQ7Z6J8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
UBE3DQ7Z6J8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 RNU6-525P-201ENST00000363685 104 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 MIR526A1-201ENST00000384897 85 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 SNORA26.2-201ENST00000390922 122 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 RNU6-360P-201ENST00000390944 104 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 AC093850.1-201ENST00000454121 251 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 RNA5SP148-201ENST00000516527 94 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 RNU7-43P-201ENST00000516554 64 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 SNORA74.3-201ENST00000517108 154 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 MIR4529-201ENST00000578110 78 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 MIR548AR-201ENST00000582191 57 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 RPL12P50-201ENST00000603116 116 ntBASIC2.37□□□□□ -2.03
UBE3DQ7Z6J8 MIR4791-201ENST00000607666 84 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms