Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AC099513.1-201ENST00000490423 301 ntBASIC2.14□□□□□ -2.07
OTOP1Q7RTM1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.14□□□□□ -2.07
OTOP1Q7RTM1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.14□□□□□ -2.07
OTOP1Q7RTM1 AP001340.1-201ENST00000624405 217 ntBASIC2.14□□□□□ -2.07
OTOP1Q7RTM1 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
OTOP1Q7RTM1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
OTOP1Q7RTM1 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
OTOP1Q7RTM1 MIR136-201ENST00000385207 82 ntBASIC2.13□□□□□ -2.07
OTOP1Q7RTM1 RNU6-1211P-201ENST00000459179 105 ntBASIC2.13□□□□□ -2.07
OTOP1Q7RTM1 Y_RNA.757-201ENST00000578934 114 ntBASIC2.13□□□□□ -2.07
OTOP1Q7RTM1 AL512598.1-201ENST00000610158 273 ntBASIC2.13□□□□□ -2.07
OTOP1Q7RTM1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
OTOP1Q7RTM1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
OTOP1Q7RTM1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 RNU6-1123P-201ENST00000362347 106 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 Y_RNA.37-201ENST00000362606 108 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 Y_RNA.120-201ENST00000363304 110 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 RNU6-392P-201ENST00000364926 101 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 Y_RNA.327-201ENST00000365201 102 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 RNU6-81P-201ENST00000365608 104 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 MIR516B2-201ENST00000385190 85 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 SNORD77.3-201ENST00000391113 65 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 AC087499.4-201ENST00000448505 178 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 RPS29P11-201ENST00000496507 171 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 Y_RNA.692-201ENST00000516627 105 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 RNA5SP480-201ENST00000516840 109 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 RNU7-70P-201ENST00000516941 66 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 U7.2-201ENST00000607576 63 ntBASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
OTOP1Q7RTM1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
OTOP1Q7RTM1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
OTOP1Q7RTM1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
OTOP1Q7RTM1 Y_RNA.52-201ENST00000362760 96 ntBASIC2.11□□□□□ -2.07
OTOP1Q7RTM1 U8.1-201ENST00000362843 134 ntBASIC2.11□□□□□ -2.07
OTOP1Q7RTM1 RNY1P11-201ENST00000363759 113 ntBASIC2.11□□□□□ -2.07
OTOP1Q7RTM1 RNU6-1117P-201ENST00000384525 104 ntBASIC2.11□□□□□ -2.07
OTOP1Q7RTM1 AC004965.1-201ENST00000413033 213 ntBASIC2.11□□□□□ -2.07
OTOP1Q7RTM1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.11□□□□□ -2.07
OTOP1Q7RTM1 RNU5E-3P-201ENST00000515913 68 ntBASIC2.11□□□□□ -2.07
OTOP1Q7RTM1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 SNORA2.2-201ENST00000365473 135 ntBASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 RNU6-959P-201ENST00000384671 107 ntBASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 MIR1267-201ENST00000408723 78 ntBASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 HMGN2P38-201ENST00000423806 265 ntBASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 Y_RNA.690-201ENST00000516603 95 ntBASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 SNORA18.7-201ENST00000516910 131 ntBASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 AP003484.1-201ENST00000530974 250 ntBASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 MIR4255-201ENST00000579351 72 ntBASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
OTOP1Q7RTM1 RNA5SP138-201ENST00000365098 114 ntBASIC2.09□□□□□ -2.07
OTOP1Q7RTM1 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.07
OTOP1Q7RTM1 RNU6-830P-201ENST00000516353 107 ntBASIC2.09□□□□□ -2.07
OTOP1Q7RTM1 RNU6-62P-201ENST00000516526 102 ntBASIC2.09□□□□□ -2.07
OTOP1Q7RTM1 RNU6-971P-201ENST00000516920 106 ntBASIC2.09□□□□□ -2.07
OTOP1Q7RTM1 SUMO2P16-201ENST00000519475 264 ntBASIC2.09□□□□□ -2.07
OTOP1Q7RTM1 MIR4299-201ENST00000577899 72 ntBASIC2.09□□□□□ -2.07
OTOP1Q7RTM1 MIR4713-201ENST00000582691 75 ntBASIC2.09□□□□□ -2.07
OTOP1Q7RTM1 MIR5197-201ENST00000583721 112 ntBASIC2.09□□□□□ -2.07
OTOP1Q7RTM1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
OTOP1Q7RTM1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
OTOP1Q7RTM1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.09□□□□□ -2.08
OTOP1Q7RTM1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.08
OTOP1Q7RTM1 MTND5P32-201ENST00000560711 1802 ntBASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 Y_RNA.241-201ENST00000364470 117 ntBASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 SNORA1.2-201ENST00000365189 134 ntBASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 RNU6-203P-201ENST00000384038 104 ntBASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 JTBP1-201ENST00000441314 247 ntBASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 AC107297.1-201ENST00000459991 176 ntBASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 Y_RNA.686-201ENST00000516548 134 ntBASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 RNU6-1149P-201ENST00000516810 97 ntBASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
OTOP1Q7RTM1 Y_RNA.191-201ENST00000363972 113 ntBASIC2.07□□□□□ -2.08
OTOP1Q7RTM1 RNU6-42P-201ENST00000384165 107 ntBASIC2.07□□□□□ -2.08
OTOP1Q7RTM1 U8.17-201ENST00000391292 132 ntBASIC2.07□□□□□ -2.08
OTOP1Q7RTM1 AL603914.1-201ENST00000401964 204 ntBASIC2.07□□□□□ -2.08
OTOP1Q7RTM1 SNORD36C-201ENST00000516733 66 ntBASIC2.07□□□□□ -2.08
OTOP1Q7RTM1 FAM106DP-201ENST00000586416 501 ntBASIC2.07□□□□□ -2.08
OTOP1Q7RTM1 RMST_2.1-201ENST00000617263 136 ntBASIC2.07□□□□□ -2.08
OTOP1Q7RTM1 AC106754.2-201ENST00000623006 233 ntBASIC2.07□□□□□ -2.08
OTOP1Q7RTM1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
OTOP1Q7RTM1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.06□□□□□ -2.08
OTOP1Q7RTM1 RNA5SP259-201ENST00000365541 109 ntBASIC2.06□□□□□ -2.08
OTOP1Q7RTM1 RNU6-439P-201ENST00000384188 106 ntBASIC2.06□□□□□ -2.08
OTOP1Q7RTM1 RNU4-57P-201ENST00000515980 135 ntBASIC2.06□□□□□ -2.08
OTOP1Q7RTM1 MIR548AI-201ENST00000579940 88 ntBASIC2.06□□□□□ -2.08
OTOP1Q7RTM1 MIR4452-201ENST00000583004 71 ntBASIC2.06□□□□□ -2.08
OTOP1Q7RTM1 MIR502-201ENST00000606349 86 ntBASIC2.06□□□□□ -2.08
OTOP1Q7RTM1 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.06□□□□□ -2.08
OTOP1Q7RTM1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
OTOP1Q7RTM1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 228.8 ms