Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 Y_RNA.818-201ENST00000618813 71 ntBASIC1.77□□□□□ -2.13
USP43Q70EL4 Y_RNA.49-201ENST00000362714 112 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 RNU6-1104P-201ENST00000384723 104 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 MIR518F-201ENST00000384973 87 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 MIR450A2-201ENST00000385022 100 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 MIR561-201ENST00000385216 97 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 U8.13-201ENST00000390842 128 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 AL353689.1-201ENST00000438895 199 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 RNA5SP57-201ENST00000459463 123 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.76□□□□□ -2.13
USP43Q70EL4 AC011406.1-201ENST00000512440 370 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 SNORA4.4-201ENST00000515921 135 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 Y_RNA.666-201ENST00000516187 112 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 RNU6-970P-201ENST00000516312 107 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 RNU6-295P-201ENST00000516901 104 ntBASIC1.76□□□□□ -2.13
USP43Q70EL4 AL589743.1-201ENST00000551932 2712 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.75□□□□□ -2.13
USP43Q70EL4 RNU6-349P-201ENST00000362402 107 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 RNU6-228P-201ENST00000362700 106 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 Y_RNA.219-201ENST00000364232 113 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
USP43Q70EL4 Y_RNA.593-201ENST00000410292 98 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 AL445646.1-201ENST00000431784 216 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 AC009238.1-201ENST00000442165 424 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 AC009237.6-201ENST00000446969 424 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 RNU6-240P-201ENST00000516098 97 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 RNU6-126P-201ENST00000516685 103 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 RNA5SP137-201ENST00000516833 135 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 RNU6-1270P-201ENST00000517128 108 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 RNU6-667P-201ENST00000517186 102 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 AC026421.1-201ENST00000519101 163 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.75□□□□□ -2.13
USP43Q70EL4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.75□□□□□ -2.13
USP43Q70EL4 AC008507.4-201ENST00000585464 127 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 SNORD115-40-201ENST00000606510 82 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 AL353149.1-201ENST00000610667 244 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 U6.108-201ENST00000637764 58 ntBASIC1.75□□□□□ -2.13
USP43Q70EL4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USP43Q70EL4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
USP43Q70EL4 MIR302B-201ENST00000362188 73 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 RNY4P6-201ENST00000363667 96 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 Y_RNA.220-201ENST00000364244 109 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 RNU6-787P-201ENST00000384032 107 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 AC019129.1-201ENST00000403786 261 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 RNA5SP225-201ENST00000410874 135 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 SRIP3-201ENST00000413200 219 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 AC109327.2-201ENST00000448339 378 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 AC023449.1-201ENST00000454464 154 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 AC107297.1-201ENST00000459991 176 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 RNU7-99P-201ENST00000516271 62 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 RNU6-65P-201ENST00000516332 98 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 RNU6-1096P-201ENST00000517089 102 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 MIR5197-201ENST00000583721 112 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 FAM71BP1-201ENST00000604431 523 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 AC022202.1-201ENST00000613515 211 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 MIR338-201ENST00000636369 67 ntBASIC1.74□□□□□ -2.13
USP43Q70EL4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.73□□□□□ -2.13
USP43Q70EL4 MIR494-201ENST00000349529 81 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 Y_RNA.107-201ENST00000363190 121 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 SNORD114-6-201ENST00000364393 72 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 MIR520G-201ENST00000385064 90 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 MIR1253-201ENST00000408273 105 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 RNA5SP247-201ENST00000411181 105 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 RPS3AP1-201ENST00000413190 320 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 RNU6-893P-201ENST00000458841 100 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 RNU1-131P-201ENST00000458943 161 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.73□□□□□ -2.13
USP43Q70EL4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 RNY4P20-201ENST00000516678 93 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 AC084364.2-201ENST00000546924 395 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
USP43Q70EL4 AC073413.2-201ENST00000604332 360 ntBASIC1.73□□□□□ -2.13
USP43Q70EL4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USP43Q70EL4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
USP43Q70EL4 Y_RNA.93-201ENST00000363066 109 ntBASIC1.72□□□□□ -2.13
USP43Q70EL4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.72□□□□□ -2.13
USP43Q70EL4 Y_RNA.253-201ENST00000364562 112 ntBASIC1.72□□□□□ -2.13
USP43Q70EL4 RNU6-972P-201ENST00000391208 107 ntBASIC1.72□□□□□ -2.13
USP43Q70EL4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.72□□□□□ -2.13
USP43Q70EL4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.72□□□□□ -2.13
USP43Q70EL4 PGBD4P5-201ENST00000445958 426 ntBASIC1.72□□□□□ -2.13
USP43Q70EL4 RNU6-693P-201ENST00000516134 107 ntBASIC1.72□□□□□ -2.13
USP43Q70EL4 MIR5089-201ENST00000580047 84 ntBASIC1.72□□□□□ -2.13
USP43Q70EL4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.72□□□□□ -2.13
USP43Q70EL4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USP43Q70EL4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USP43Q70EL4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USP43Q70EL4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USP43Q70EL4 Y_RNA.17-201ENST00000362433 111 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 Y_RNA.290-201ENST00000364879 114 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 Y_RNA.298-201ENST00000364960 107 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 SNORA67.3-201ENST00000384366 140 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 RNA5SP467-201ENST00000391274 118 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 MIR1262-201ENST00000408276 93 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms