Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU6-1007P-201ENST00000516586 107 ntBASIC1.14□□□□□ -2.23
NHLRC1Q6VVB1 AC090821.2-201ENST00000523552 176 ntBASIC1.14□□□□□ -2.23
NHLRC1Q6VVB1 AC109810.1-201ENST00000534066 224 ntBASIC1.14□□□□□ -2.23
NHLRC1Q6VVB1 AC120024.3-201ENST00000603167 156 ntBASIC1.14□□□□□ -2.23
NHLRC1Q6VVB1 AL078603.1-201ENST00000603824 313 ntBASIC1.14□□□□□ -2.23
NHLRC1Q6VVB1 AL022345.2-201ENST00000606307 135 ntBASIC1.14□□□□□ -2.23
NHLRC1Q6VVB1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.802-201ENST00000614892 130 ntBASIC1.14□□□□□ -2.23
NHLRC1Q6VVB1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 AL157777.2-201ENST00000258070 137 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 SNORD68-201ENST00000363214 84 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 RNU4-41P-201ENST00000364426 143 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.272-201ENST00000364696 102 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-484P-201ENST00000384016 107 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-746P-201ENST00000384112 109 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-42P-201ENST00000384165 107 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 MIR616-201ENST00000385293 97 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 MIR1276-201ENST00000408707 83 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 SNORD11-201ENST00000459124 84 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-437P-201ENST00000459408 95 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 NDUFA4P2-201ENST00000489989 244 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 RPL23AP54-201ENST00000495129 419 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-947P-201ENST00000516264 106 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.23-201ENST00000362496 106 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.121-201ENST00000363309 113 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-674P-201ENST00000363831 107 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-1336P-201ENST00000383886 109 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 MIR15B-201ENST00000385045 98 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-1228P-201ENST00000391014 107 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 AL606845.1-201ENST00000404881 255 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 MIR548M-201ENST00000408260 86 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 RNU4-61P-201ENST00000411243 107 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 SNRPGP8-201ENST00000454064 226 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 RN7SKP164-201ENST00000516138 266 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 RNA5SP220-201ENST00000516298 104 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-406P-201ENST00000516470 107 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 RNU7-121P-201ENST00000516604 62 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.703-201ENST00000516846 111 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 AC011604.1-201ENST00000545978 196 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 MIR4724-201ENST00000579485 89 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 MIR4744-201ENST00000581563 82 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 U2.22-201ENST00000636441 106 ntBASIC1.12□□□□□ -2.23
NHLRC1Q6VVB1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-1209P-201ENST00000363655 107 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 SNORD45.3-201ENST00000363836 72 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 RNY1P5-201ENST00000383890 115 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 SNORD116-18-201ENST00000383961 92 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 SNORA72-201ENST00000384339 132 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.580-201ENST00000391004 95 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-131P-201ENST00000391144 107 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 HMGN1P7-201ENST00000491722 313 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 SNORA31.2-201ENST00000516019 134 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 SNORD116-25-201ENST00000516517 92 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 MIR3910-1-201ENST00000580936 111 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 AL049861.1-201ENST00000603130 150 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 AL391903.3-201ENST00000612158 163 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 AC012676.2-201ENST00000619258 186 ntBASIC1.11□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.91-201ENST00000363042 107 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.253-201ENST00000364562 112 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-312P-201ENST00000364629 107 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-144P-201ENST00000383951 107 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 MIR489-201ENST00000384923 84 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 SNORD72-201ENST00000390994 80 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.622-201ENST00000411091 108 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 SNRPGP10-201ENST00000432323 225 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 AC093850.1-201ENST00000454121 251 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 RNU7-197P-201ENST00000458836 62 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.797-201ENST00000515977 94 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 RNU7-116P-201ENST00000516940 62 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-165P-201ENST00000517170 99 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 RPL23AP91-201ENST00000569211 455 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 MIR4431-201ENST00000579990 94 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 MIR4452-201ENST00000583004 71 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 AL353770.2-201ENST00000620024 78 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 MIR6734-201ENST00000621166 68 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 AC091895.1-201ENST00000624494 256 ntBASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
NHLRC1Q6VVB1 MIR367-201ENST00000362299 68 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-1084P-201ENST00000362498 107 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-103P-201ENST00000363686 107 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 U8.5-201ENST00000364528 136 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-1082P-201ENST00000364574 107 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-768P-201ENST00000384683 107 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 MIR569-201ENST00000385228 96 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 Y_RNA.587-201ENST00000391210 103 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 HMGN2P32-201ENST00000444648 269 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 AL392103.1-201ENST00000447000 198 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 RNU6-917P-201ENST00000516294 104 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 SNORA4-201ENST00000584302 138 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 FAM106DP-201ENST00000586416 501 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms