Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNU4-16P-201ENST00000364737 141 ntBASIC2.45□□□□□ -2.02
CNKSR3Q6P9H4 SNORA67.1-201ENST00000364749 141 ntBASIC2.45□□□□□ -2.02
CNKSR3Q6P9H4 SNORA80E-201ENST00000384744 137 ntBASIC2.45□□□□□ -2.02
CNKSR3Q6P9H4 RNU6-816P-201ENST00000390914 107 ntBASIC2.45□□□□□ -2.02
CNKSR3Q6P9H4 RNU6-1268P-201ENST00000391214 107 ntBASIC2.45□□□□□ -2.02
CNKSR3Q6P9H4 RNU6-1239P-201ENST00000391310 107 ntBASIC2.45□□□□□ -2.02
CNKSR3Q6P9H4 RPL39P25-201ENST00000449384 154 ntBASIC2.45□□□□□ -2.02
CNKSR3Q6P9H4 SNORA18.7-201ENST00000516910 131 ntBASIC2.45□□□□□ -2.02
CNKSR3Q6P9H4 MIR3683-201ENST00000580847 82 ntBASIC2.45□□□□□ -2.02
CNKSR3Q6P9H4 AC010297.1-201ENST00000623948 149 ntBASIC2.45□□□□□ -2.02
CNKSR3Q6P9H4 AC080100.1-201ENST00000624239 5356 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 RNY1P10-201ENST00000363268 113 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 SNORA3A-201ENST00000364113 130 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 Y_RNA.336-201ENST00000365307 109 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 RNU6-1152P-201ENST00000384576 107 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 RNU6-160P-201ENST00000384591 107 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 SNORA11.4-201ENST00000408823 129 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 CST2P1-201ENST00000425770 87 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 PGBD4P5-201ENST00000445958 426 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 RNA5SP458-201ENST00000516188 119 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 RNU6-638P-201ENST00000516582 104 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 RNU7-6P-201ENST00000516845 62 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 AC026421.1-201ENST00000519101 163 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 AC087741.2-201ENST00000619415 172 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 AC015726.2-201ENST00000620112 122 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 MIR6766-201ENST00000622641 72 ntBASIC2.44□□□□□ -2.02
CNKSR3Q6P9H4 MIR494-201ENST00000349529 81 ntBASIC2.43□□□□□ -2.02
CNKSR3Q6P9H4 Y_RNA.107-201ENST00000363190 121 ntBASIC2.43□□□□□ -2.02
CNKSR3Q6P9H4 RNU6-820P-201ENST00000384273 107 ntBASIC2.43□□□□□ -2.02
CNKSR3Q6P9H4 MIR515-2-201ENST00000384883 83 ntBASIC2.43□□□□□ -2.02
CNKSR3Q6P9H4 MIR515-1-201ENST00000384884 83 ntBASIC2.43□□□□□ -2.02
CNKSR3Q6P9H4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.43□□□□□ -2.02
CNKSR3Q6P9H4 AC087499.4-201ENST00000448505 178 ntBASIC2.43□□□□□ -2.02
CNKSR3Q6P9H4 DEFB131E-201ENST00000532329 154 ntBASIC2.43□□□□□ -2.02
CNKSR3Q6P9H4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.43□□□□□ -2.02
CNKSR3Q6P9H4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 RNY3P2-201ENST00000362918 102 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 RNU6-1099P-201ENST00000363533 107 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 SNORA67.3-201ENST00000384366 140 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 Y_RNA.494-201ENST00000384432 111 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 MIR1912-201ENST00000410389 80 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 RNU6-893P-201ENST00000458841 100 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 RNU7-80P-201ENST00000459562 61 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 AC113410.1-201ENST00000505029 247 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 SCARNA23-201ENST00000516060 130 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 RNU6-826P-201ENST00000516827 104 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 RNU6-1116P-201ENST00000517269 99 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 AC078899.2-201ENST00000595282 212 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 AC245884.12-201ENST00000615364 59 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 MIR6132-201ENST00000622083 109 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 AC022513.1-201ENST00000624512 117 ntBASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.42□□□□□ -2.02
CNKSR3Q6P9H4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 MIR342-201ENST00000362212 99 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 RNA5SP493-201ENST00000364115 91 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 RNA5SP109-201ENST00000391010 116 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 RNA5SP482-201ENST00000391269 118 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 SNX2P2-201ENST00000424553 323 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 AL512326.2-201ENST00000426359 151 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 AC245047.3-201ENST00000429428 127 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 AC011753.1-201ENST00000451001 220 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 RNA5SP200-201ENST00000516360 103 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 Y_RNA.676-201ENST00000516393 96 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 Y_RNA.773-201ENST00000607168 90 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 AC095038.3-201ENST00000634439 195 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 MIR1255B1-201ENST00000636325 63 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 AC007336.1-201ENST00000576365 3828 ntBASIC2.41□□□□□ -2.02
CNKSR3Q6P9H4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 MIR21-201ENST00000362134 72 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 Y_RNA.290-201ENST00000364879 114 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-1134P-201ENST00000365156 101 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 AL627390.1-201ENST00000396055 340 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 HMGN2P39-201ENST00000398005 273 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 AL023284.1-201ENST00000403956 276 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 Y_RNA.593-201ENST00000410292 98 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 RN7SKP200-201ENST00000410564 320 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 RNA5SP144-201ENST00000410846 116 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 AC114811.1-201ENST00000507207 168 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 RNU7-193P-201ENST00000516723 65 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 MIR3169-201ENST00000578032 83 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 MIR3618-201ENST00000580330 88 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 AC245060.5-201ENST00000610778 3293 ntBASIC2.4□□□□□ -2.03
CNKSR3Q6P9H4 MIRLET7C-201ENST00000362160 84 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 RNU4-36P-201ENST00000364294 144 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 Y_RNA.454-201ENST00000384224 113 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 Y_RNA.531-201ENST00000384589 121 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 Y_RNA.685-201ENST00000516532 108 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms