Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MIR2682-201ENST00000580305 110 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 MIR4796-201ENST00000580742 81 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 uc_338.1-201ENST00000612113 180 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 AL162274.2-201ENST00000614406 332 ntBASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNFT1Q5M7Z0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 RNU5F-1-201ENST00000362507 117 ntBASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 RNU6-161P-201ENST00000363051 106 ntBASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 SNORD21-201ENST00000383953 95 ntBASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 Y_RNA.532-201ENST00000384590 113 ntBASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 RNU6-296P-201ENST00000384608 107 ntBASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 MIR452-201ENST00000385020 85 ntBASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 RNA5SP229-201ENST00000410809 99 ntBASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.93□□□□□ -1.94
RNFT1Q5M7Z0 MIR422A-201ENST00000362286 90 ntBASIC2.92□□□□□ -1.94
RNFT1Q5M7Z0 MIR136-201ENST00000385207 82 ntBASIC2.92□□□□□ -1.94
RNFT1Q5M7Z0 MIR634-201ENST00000385208 97 ntBASIC2.92□□□□□ -1.94
RNFT1Q5M7Z0 RNU6-587P-201ENST00000391282 106 ntBASIC2.92□□□□□ -1.94
RNFT1Q5M7Z0 AC018868.1-201ENST00000491307 315 ntBASIC2.92□□□□□ -1.94
RNFT1Q5M7Z0 MIR2276-201ENST00000516886 89 ntBASIC2.92□□□□□ -1.94
RNFT1Q5M7Z0 MIR8066-201ENST00000617280 78 ntBASIC2.92□□□□□ -1.94
RNFT1Q5M7Z0 U6.111-201ENST00000636093 83 ntBASIC2.92□□□□□ -1.94
RNFT1Q5M7Z0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 SNORA26.7-201ENST00000391288 122 ntBASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 SNORA59A-201ENST00000459326 152 ntBASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 AC092185.1-201ENST00000491371 97 ntBASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 EIF4BP1-201ENST00000554881 351 ntBASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 UBL5P2-201ENST00000583788 219 ntBASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 MIR8055-201ENST00000610739 97 ntBASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 AC105081.1-201ENST00000617727 106 ntBASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 MIR8065-201ENST00000620577 100 ntBASIC2.91□□□□□ -1.94
RNFT1Q5M7Z0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.9□□□□□ -1.94
RNFT1Q5M7Z0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
RNFT1Q5M7Z0 RNU6-540P-201ENST00000384622 101 ntBASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 MIR516B2-201ENST00000385190 85 ntBASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 U8.16-201ENST00000391279 133 ntBASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 SNORD30.1-201ENST00000391309 70 ntBASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 MIR1262-201ENST00000408276 93 ntBASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 RN7SKP220-201ENST00000410611 288 ntBASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 HMGN1P33-201ENST00000432945 451 ntBASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 Z96811.1-201ENST00000445880 108 ntBASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 RNU6-1108P-201ENST00000516308 104 ntBASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 AL355297.2-201ENST00000604792 129 ntBASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 MIR7515-201ENST00000637837 67 ntBASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
RNFT1Q5M7Z0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 Y_RNA.264-201ENST00000364665 102 ntBASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 SNORA7.4-201ENST00000384249 137 ntBASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 Y_RNA.537-201ENST00000384626 109 ntBASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 MIR520H-201ENST00000385126 88 ntBASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 SNORA11.4-201ENST00000408823 129 ntBASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 RNU7-85P-201ENST00000458851 63 ntBASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 snoU13.16-201ENST00000459350 104 ntBASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 RPS27P29-201ENST00000463110 252 ntBASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 AC008885.1-201ENST00000514930 301 ntBASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 SNORA31.10-201ENST00000516482 106 ntBASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.89□□□□□ -1.95
RNFT1Q5M7Z0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 MIR30E-201ENST00000362104 92 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 RNU6-443P-201ENST00000384780 107 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 AL034345.1-201ENST00000407768 123 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 AC104332.2-201ENST00000429959 156 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 Y_RNA.648-201ENST00000459455 110 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 RNA5SP168-201ENST00000516642 112 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 MIR548AR-201ENST00000582191 57 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 MIR4484-201ENST00000582855 83 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 AL033523.1-201ENST00000605153 153 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 AC006386.2-201ENST00000624491 75 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 AC012005.1-201ENST00000624575 75 ntBASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.88□□□□□ -1.95
RNFT1Q5M7Z0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNFT1Q5M7Z0 RNU6-805P-201ENST00000365643 106 ntBASIC2.87□□□□□ -1.95
RNFT1Q5M7Z0 SNORA54-201ENST00000384281 123 ntBASIC2.87□□□□□ -1.95
RNFT1Q5M7Z0 SNORA44-201ENST00000384584 132 ntBASIC2.87□□□□□ -1.95
RNFT1Q5M7Z0 MIR635-201ENST00000384830 98 ntBASIC2.87□□□□□ -1.95
RNFT1Q5M7Z0 RNA5SP293-201ENST00000410527 113 ntBASIC2.87□□□□□ -1.95
RNFT1Q5M7Z0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms