Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 PCNPP3-201ENST00000393579 471 ntBASIC-0.14□□□□□ -2.43
ZNF404Q494X3 AL512326.2-201ENST00000426359 151 ntBASIC-0.14□□□□□ -2.43
ZNF404Q494X3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.14□□□□□ -2.43
ZNF404Q494X3 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.14□□□□□ -2.43
ZNF404Q494X3 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.14□□□□□ -2.43
ZNF404Q494X3 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.14□□□□□ -2.43
ZNF404Q494X3 RNU7-149P-201ENST00000516739 59 ntBASIC-0.14□□□□□ -2.43
ZNF404Q494X3 AC133104.2-201ENST00000615272 193 ntBASIC-0.14□□□□□ -2.43
ZNF404Q494X3 MIR30D-201ENST00000362283 70 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 RNU6-490P-201ENST00000362985 107 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 RNU4-80P-201ENST00000363200 141 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 RNA5SP325-201ENST00000363756 130 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 RNU6-801P-201ENST00000364087 105 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 SNORA27-201ENST00000384323 126 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 MIR610-201ENST00000385139 96 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 RNU4-30P-201ENST00000410245 143 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 AL589823.1-201ENST00000429577 183 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 AC069271.1-201ENST00000445577 156 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 RPS29P24-201ENST00000486345 171 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 AC084782.3-201ENST00000612282 578 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.15□□□□□ -2.43
ZNF404Q494X3 RNU6-845P-201ENST00000362578 103 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 MIR559-201ENST00000385188 96 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 SNORD12C-201ENST00000386307 89 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 RNU4-83P-201ENST00000410863 133 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 RNU7-129P-201ENST00000516128 62 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 AC007751.1-201ENST00000529260 376 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.16□□□□□ -2.44
ZNF404Q494X3 MIR4743-201ENST00000584576 69 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 MIR7107-201ENST00000611489 80 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 MIR6828-201ENST00000636181 60 ntBASIC-0.16□□□□□ -2.44
ZNF404Q494X3 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 RNU6-127P-201ENST00000390897 107 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 RNU6-308P-201ENST00000390957 107 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 RNA5SP496-201ENST00000391240 109 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 SNORD93-201ENST00000408813 74 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 POLR2KP2-201ENST00000438155 177 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 RNU6-699P-201ENST00000517081 110 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 AC124312.5-201ENST00000604451 268 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 MIR8066-201ENST00000617280 78 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 MIR4272-201ENST00000635924 64 ntBASIC-0.17□□□□□ -2.44
ZNF404Q494X3 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.18□□□□□ -2.44
ZNF404Q494X3 RNA5SP257-201ENST00000363023 116 ntBASIC-0.18□□□□□ -2.44
ZNF404Q494X3 RNU6-899P-201ENST00000363947 107 ntBASIC-0.18□□□□□ -2.44
ZNF404Q494X3 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.18□□□□□ -2.44
ZNF404Q494X3 RNY3-201ENST00000365484 102 ntBASIC-0.18□□□□□ -2.44
ZNF404Q494X3 RNU6-937P-201ENST00000384325 106 ntBASIC-0.18□□□□□ -2.44
ZNF404Q494X3 RNU6-938P-201ENST00000411285 103 ntBASIC-0.18□□□□□ -2.44
ZNF404Q494X3 PDCL2P1-201ENST00000419302 352 ntBASIC-0.18□□□□□ -2.44
ZNF404Q494X3 RPL39P25-201ENST00000449384 154 ntBASIC-0.18□□□□□ -2.44
ZNF404Q494X3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.18□□□□□ -2.44
ZNF404Q494X3 AL049861.1-201ENST00000603130 150 ntBASIC-0.18□□□□□ -2.44
ZNF404Q494X3 AC122108.2-201ENST00000611946 526 ntBASIC-0.18□□□□□ -2.44
ZNF404Q494X3 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 RNU6-740P-201ENST00000364734 105 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 RNU6-144P-201ENST00000383951 107 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 SNORD63-201ENST00000384262 68 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 MIR145-201ENST00000384967 88 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 MIR643-201ENST00000385267 97 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 MIR548I3-201ENST00000408378 149 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 SUMO1P3-201ENST00000439961 304 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 RNU6-559P-201ENST00000516151 98 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 AC131281.1-201ENST00000522984 164 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 AL121655.1-201ENST00000605811 308 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 AL021707.8-201ENST00000609428 183 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 uc_338.22-201ENST00000622722 187 ntBASIC-0.19□□□□□ -2.44
ZNF404Q494X3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.19□□□□□ -2.44
ZNF404Q494X3 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 MIR760-201ENST00000390220 80 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 AC010655.3-201ENST00000478818 450 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 SNORD36C-201ENST00000516733 66 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 RNU6-135P-201ENST00000516769 101 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 MIR4662B-201ENST00000579498 81 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 RPS29P30-201ENST00000600975 111 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 AC099654.14-201ENST00000638599 341 ntBASIC-0.2□□□□□ -2.44
ZNF404Q494X3 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.21□□□□□ -2.44
ZNF404Q494X3 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms