Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CTC1Q2NKJ3 RNU6-141P-201ENST00000410499 105 ntBASIC3.35□□□□□ -1.87
CTC1Q2NKJ3 RNU7-67P-201ENST00000459003 62 ntBASIC3.35□□□□□ -1.87
CTC1Q2NKJ3 AC105081.1-201ENST00000617727 106 ntBASIC3.35□□□□□ -1.87
CTC1Q2NKJ3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.35□□□□□ -1.87
CTC1Q2NKJ3 AC245060.5-201ENST00000610778 3293 ntBASIC3.35□□□□□ -1.87
CTC1Q2NKJ3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.35□□□□□ -1.87
CTC1Q2NKJ3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.35□□□□□ -1.87
CTC1Q2NKJ3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CTC1Q2NKJ3 AC093010.3-201ENST00000570269 15214 ntBASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 SNORA71.1-201ENST00000364523 117 ntBASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 RNU6-480P-201ENST00000384332 107 ntBASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 RNU6-540P-201ENST00000384622 101 ntBASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 RNA5SP229-201ENST00000410809 99 ntBASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 SNORD4B-201ENST00000459083 72 ntBASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 AC234781.5-201ENST00000508429 271 ntBASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 Y_RNA.681-201ENST00000516445 113 ntBASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 FAM106DP-201ENST00000586416 501 ntBASIC3.34□□□□□ -1.87
CTC1Q2NKJ3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CTC1Q2NKJ3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.34□□□□□ -1.88
CTC1Q2NKJ3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CTC1Q2NKJ3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CTC1Q2NKJ3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CTC1Q2NKJ3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 SNORA2B-201ENST00000384583 137 ntBASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 AC015922.2-201ENST00000435593 184 ntBASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 AL606517.2-201ENST00000442855 241 ntBASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 SNORD67.1-201ENST00000516618 108 ntBASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 MIR3616-201ENST00000584070 92 ntBASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 uc_338.1-201ENST00000612113 180 ntBASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 U6.111-201ENST00000636093 83 ntBASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTC1Q2NKJ3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 MIR635-201ENST00000384830 98 ntBASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 MIR9-2-201ENST00000384838 87 ntBASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 MIR561-201ENST00000385216 97 ntBASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 RNU6-1321P-201ENST00000390905 107 ntBASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 RNA5SP261-201ENST00000410536 106 ntBASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 AC245047.3-201ENST00000429428 127 ntBASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 DNAJC19P9-201ENST00000555084 351 ntBASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 AL355297.2-201ENST00000604792 129 ntBASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTC1Q2NKJ3 RNU4-82P-201ENST00000362443 140 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 RNU1-23P-201ENST00000363361 144 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 SNORD21-201ENST00000383953 95 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 Y_RNA.508-201ENST00000384502 114 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 AC245047.7-201ENST00000440265 293 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 STAG3L5P-204ENST00000443759 179 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 RNA5SP385-201ENST00000515947 110 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 RN7SKP132-201ENST00000516001 208 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 RNU7-53P-201ENST00000516705 60 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 AC007336.1-201ENST00000576365 3828 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 MIR4796-201ENST00000580742 81 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 SNORD3E-202ENST00000627253 216 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 AC092435.3-201ENST00000565538 3654 ntBASIC3.31□□□□□ -1.88
CTC1Q2NKJ3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CTC1Q2NKJ3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTC1Q2NKJ3 Y_RNA.370-201ENST00000365589 108 ntBASIC3.3□□□□□ -1.88
CTC1Q2NKJ3 RNU6-471P-201ENST00000383944 106 ntBASIC3.3□□□□□ -1.88
CTC1Q2NKJ3 SNORA70.7-201ENST00000384159 133 ntBASIC3.3□□□□□ -1.88
CTC1Q2NKJ3 RNU6-913P-201ENST00000390913 95 ntBASIC3.3□□□□□ -1.88
CTC1Q2NKJ3 AC108938.1-201ENST00000451204 136 ntBASIC3.3□□□□□ -1.88
CTC1Q2NKJ3 RN7SL75P-201ENST00000461926 281 ntBASIC3.3□□□□□ -1.88
CTC1Q2NKJ3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.3□□□□□ -1.88
CTC1Q2NKJ3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTC1Q2NKJ3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CTC1Q2NKJ3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 SNORD38.2-201ENST00000384470 69 ntBASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 RNU6-587P-201ENST00000391282 106 ntBASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 RNA5SP184-201ENST00000411071 108 ntBASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 HMGN1P33-201ENST00000432945 451 ntBASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 AC105272.1-201ENST00000438604 198 ntBASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 ATP5J2P3-201ENST00000451550 258 ntBASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 RN7SL297P-201ENST00000483161 293 ntBASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 MIR4319-201ENST00000577285 85 ntBASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 AL020996.3-201ENST00000606617 222 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms