Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 snoU13.27-201ENST00000459278 104 ntBASIC2.58□□□□□ -2
PCDH1Q08174 AC113410.1-201ENST00000505029 247 ntBASIC2.58□□□□□ -2
PCDH1Q08174 MIR3152-201ENST00000579801 74 ntBASIC2.58□□□□□ -2
PCDH1Q08174 MIR3618-201ENST00000580330 88 ntBASIC2.58□□□□□ -2
PCDH1Q08174 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
PCDH1Q08174 AC095038.3-201ENST00000634439 195 ntBASIC2.58□□□□□ -2
PCDH1Q08174 MIR2052-201ENST00000636055 55 ntBASIC2.58□□□□□ -2
PCDH1Q08174 SNORD115-19-201ENST00000363098 82 ntBASIC2.57□□□□□ -2
PCDH1Q08174 SNORD115-18-201ENST00000363293 82 ntBASIC2.57□□□□□ -2
PCDH1Q08174 SNORD115-17-201ENST00000364612 82 ntBASIC2.57□□□□□ -2
PCDH1Q08174 MIR488-201ENST00000365739 83 ntBASIC2.57□□□□□ -2
PCDH1Q08174 MIR660-201ENST00000385235 97 ntBASIC2.57□□□□□ -2
PCDH1Q08174 RPS29P29-201ENST00000456396 171 ntBASIC2.57□□□□□ -2
PCDH1Q08174 RNU7-113P-201ENST00000459273 62 ntBASIC2.57□□□□□ -2
PCDH1Q08174 RNU6-958P-201ENST00000516995 106 ntBASIC2.57□□□□□ -2
PCDH1Q08174 AL513534.2-201ENST00000603836 250 ntBASIC2.57□□□□□ -2
PCDH1Q08174 AC103810.6-201ENST00000606708 136 ntBASIC2.57□□□□□ -2
PCDH1Q08174 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.57□□□□□ -2
PCDH1Q08174 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PCDH1Q08174 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PCDH1Q08174 Y_RNA.171-201ENST00000363760 102 ntBASIC2.56□□□□□ -2
PCDH1Q08174 RNU4-36P-201ENST00000364294 144 ntBASIC2.56□□□□□ -2
PCDH1Q08174 RNA5SP270-201ENST00000411361 118 ntBASIC2.56□□□□□ -2
PCDH1Q08174 PGBD4P5-201ENST00000445958 426 ntBASIC2.56□□□□□ -2
PCDH1Q08174 AC099513.1-201ENST00000490423 301 ntBASIC2.56□□□□□ -2
PCDH1Q08174 RNU2-13P-201ENST00000515909 113 ntBASIC2.56□□□□□ -2
PCDH1Q08174 DEFB131E-201ENST00000532329 154 ntBASIC2.56□□□□□ -2
PCDH1Q08174 MIR203B-201ENST00000636080 86 ntBASIC2.56□□□□□ -2
PCDH1Q08174 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
PCDH1Q08174 SNORA22.1-201ENST00000362701 134 ntBASIC2.55□□□□□ -2
PCDH1Q08174 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
PCDH1Q08174 SNORA24-201ENST00000384096 131 ntBASIC2.55□□□□□ -2
PCDH1Q08174 Y_RNA.558-201ENST00000384685 113 ntBASIC2.55□□□□□ -2
PCDH1Q08174 MIR526A1-201ENST00000384897 85 ntBASIC2.55□□□□□ -2
PCDH1Q08174 SNORD28B-201ENST00000390993 75 ntBASIC2.55□□□□□ -2
PCDH1Q08174 RNU4-69P-201ENST00000410677 143 ntBASIC2.55□□□□□ -2
PCDH1Q08174 AC105272.1-201ENST00000438604 198 ntBASIC2.55□□□□□ -2
PCDH1Q08174 SNORD123-201ENST00000459473 70 ntBASIC2.55□□□□□ -2
PCDH1Q08174 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.55□□□□□ -2
PCDH1Q08174 AL049779.4-201ENST00000604500 156 ntBASIC2.55□□□□□ -2
PCDH1Q08174 AL033523.1-201ENST00000605153 153 ntBASIC2.55□□□□□ -2
PCDH1Q08174 Y_RNA.773-201ENST00000607168 90 ntBASIC2.55□□□□□ -2
PCDH1Q08174 SNORD3E-202ENST00000627253 216 ntBASIC2.55□□□□□ -2
PCDH1Q08174 MIR1255B1-201ENST00000636325 63 ntBASIC2.55□□□□□ -2
PCDH1Q08174 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.55□□□□□ -2
PCDH1Q08174 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
PCDH1Q08174 Y_RNA.93-201ENST00000363066 109 ntBASIC2.54□□□□□ -2
PCDH1Q08174 Y_RNA.107-201ENST00000363190 121 ntBASIC2.54□□□□□ -2
PCDH1Q08174 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
PCDH1Q08174 Y_RNA.220-201ENST00000364244 109 ntBASIC2.54□□□□□ -2
PCDH1Q08174 RNA5SP261-201ENST00000410536 106 ntBASIC2.54□□□□□ -2
PCDH1Q08174 RNU6-1258P-201ENST00000516911 111 ntBASIC2.54□□□□□ -2
PCDH1Q08174 DNAJC19P9-201ENST00000555084 351 ntBASIC2.54□□□□□ -2
PCDH1Q08174 GTF3AP2-201ENST00000557014 266 ntBASIC2.54□□□□□ -2
PCDH1Q08174 MIR548AR-201ENST00000582191 57 ntBASIC2.54□□□□□ -2
PCDH1Q08174 MIR5092-201ENST00000583139 88 ntBASIC2.54□□□□□ -2
PCDH1Q08174 MIR4635-201ENST00000583759 79 ntBASIC2.54□□□□□ -2
PCDH1Q08174 MIR6841-201ENST00000637129 72 ntBASIC2.54□□□□□ -2
PCDH1Q08174 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PCDH1Q08174 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PCDH1Q08174 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PCDH1Q08174 SNORD115-2-201ENST00000362842 82 ntBASIC2.53□□□□□ -2
PCDH1Q08174 RNU6-363P-201ENST00000362895 105 ntBASIC2.53□□□□□ -2
PCDH1Q08174 RNY3P2-201ENST00000362918 102 ntBASIC2.53□□□□□ -2
PCDH1Q08174 Y_RNA.155-201ENST00000363632 101 ntBASIC2.53□□□□□ -2
PCDH1Q08174 SNORD115-20-201ENST00000365099 82 ntBASIC2.53□□□□□ -2
PCDH1Q08174 RNU1-51P-201ENST00000365345 176 ntBASIC2.53□□□□□ -2
PCDH1Q08174 SNORA26.6-201ENST00000391256 115 ntBASIC2.53□□□□□ -2
PCDH1Q08174 RNU7-73P-201ENST00000458743 63 ntBASIC2.53□□□□□ -2
PCDH1Q08174 SCARNA23-201ENST00000516060 130 ntBASIC2.53□□□□□ -2
PCDH1Q08174 FAM71BP1-201ENST00000604431 523 ntBASIC2.53□□□□□ -2
PCDH1Q08174 SNORD14A-201ENST00000606526 91 ntBASIC2.53□□□□□ -2
PCDH1Q08174 MIR4791-201ENST00000607666 84 ntBASIC2.53□□□□□ -2
PCDH1Q08174 AC243994.1-201ENST00000618627 109 ntBASIC2.53□□□□□ -2
PCDH1Q08174 U1.36-201ENST00000620684 176 ntBASIC2.53□□□□□ -2
PCDH1Q08174 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCDH1Q08174 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
PCDH1Q08174 MIR6073-201ENST00000352083 89 ntBASIC2.52□□□□□ -2.01
PCDH1Q08174 MIR449A-201ENST00000362113 91 ntBASIC2.52□□□□□ -2.01
PCDH1Q08174 MIR424-201ENST00000362227 98 ntBASIC2.52□□□□□ -2.01
PCDH1Q08174 RNU6-1099P-201ENST00000363533 107 ntBASIC2.52□□□□□ -2.01
PCDH1Q08174 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
PCDH1Q08174 RNU6-301P-201ENST00000384277 107 ntBASIC2.52□□□□□ -2.01
PCDH1Q08174 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.52□□□□□ -2.01
PCDH1Q08174 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
PCDH1Q08174 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.52□□□□□ -2.01
PCDH1Q08174 RN7SKP132-201ENST00000516001 208 ntBASIC2.52□□□□□ -2.01
PCDH1Q08174 MIR3162-201ENST00000581818 82 ntBASIC2.52□□□□□ -2.01
PCDH1Q08174 AC064859.1-201ENST00000624741 174 ntBASIC2.52□□□□□ -2.01
PCDH1Q08174 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PCDH1Q08174 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
PCDH1Q08174 RNU4-67P-201ENST00000364569 141 ntBASIC2.51□□□□□ -2.01
PCDH1Q08174 RNU6-409P-201ENST00000384114 104 ntBASIC2.51□□□□□ -2.01
PCDH1Q08174 Y_RNA.470-201ENST00000384307 117 ntBASIC2.51□□□□□ -2.01
PCDH1Q08174 RNU6-733P-201ENST00000410759 104 ntBASIC2.51□□□□□ -2.01
PCDH1Q08174 RNU6-1190P-201ENST00000410811 104 ntBASIC2.51□□□□□ -2.01
PCDH1Q08174 RPS3AP1-201ENST00000413190 320 ntBASIC2.51□□□□□ -2.01
PCDH1Q08174 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDH1Q08174 RNA5SP356-201ENST00000515972 94 ntBASIC2.51□□□□□ -2.01
PCDH1Q08174 MIR4694-201ENST00000578534 80 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms