Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 SNORA27-201ENST00000384323 126 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 SNORA40.5-201ENST00000391061 128 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 MIR548I3-201ENST00000408378 149 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 MIR1265-201ENST00000408444 86 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 RNU6-938P-201ENST00000411285 103 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 AL445193.1-201ENST00000441183 141 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 RPS29P24-201ENST00000486345 171 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 SNORA25.13-201ENST00000516395 103 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 RNU7-115P-201ENST00000516433 55 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 RNU6-273P-201ENST00000516937 96 ntBASIC-0.97□□□□□ -2.56
H3F3AP84243 RNU6-47P-201ENST00000383866 107 ntBASIC-0.98□□□□□ -2.57
H3F3AP84243 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.98□□□□□ -2.57
H3F3AP84243 RNA5SP484-201ENST00000458857 111 ntBASIC-0.98□□□□□ -2.57
H3F3AP84243 AC124312.5-201ENST00000604451 268 ntBASIC-0.98□□□□□ -2.57
H3F3AP84243 AC063944.3-201ENST00000609969 533 ntBASIC-0.98□□□□□ -2.57
H3F3AP84243 MIR6128-201ENST00000615528 109 ntBASIC-0.98□□□□□ -2.57
H3F3AP84243 MIR548AY-201ENST00000617669 107 ntBASIC-0.98□□□□□ -2.57
H3F3AP84243 AL603755.1-201ENST00000619504 163 ntBASIC-0.98□□□□□ -2.57
H3F3AP84243 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 RNU6-455P-201ENST00000384681 107 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 AL590004.1-201ENST00000405321 300 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 MTATP6P17-201ENST00000431030 672 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 AL445567.1-201ENST00000439121 144 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 SEPT14P3-201ENST00000439401 183 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 AL732372.2-207ENST00000445840 183 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 SEPT14P2-201ENST00000453405 183 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 RPL30P15-201ENST00000457129 321 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.99□□□□□ -2.57
H3F3AP84243 AC010655.3-201ENST00000478818 450 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 SEPT14P4-201ENST00000513445 186 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 RNU7-188P-201ENST00000517063 64 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 FO082796.1-201ENST00000523795 183 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 DEFB131E-201ENST00000532329 154 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 AC141846.1-201ENST00000568348 142 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 AL356055.1-201ENST00000602528 446 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 AL080274.1-201ENST00000605565 220 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 AC087752.4-201ENST00000605911 462 ntBASIC-0.99□□□□□ -2.57
H3F3AP84243 MIR342-201ENST00000362212 99 ntBASIC-1□□□□□ -2.57
H3F3AP84243 SNORD115-28-201ENST00000363931 81 ntBASIC-1□□□□□ -2.57
H3F3AP84243 RNU4-50P-201ENST00000364361 141 ntBASIC-1□□□□□ -2.57
H3F3AP84243 RNU6-865P-201ENST00000364772 107 ntBASIC-1□□□□□ -2.57
H3F3AP84243 RNU6-702P-201ENST00000364982 107 ntBASIC-1□□□□□ -2.57
H3F3AP84243 RNU6-1162P-201ENST00000384443 104 ntBASIC-1□□□□□ -2.57
H3F3AP84243 Y_RNA.692-201ENST00000516627 105 ntBASIC-1□□□□□ -2.57
H3F3AP84243 RNU6-531P-201ENST00000516694 104 ntBASIC-1□□□□□ -2.57
H3F3AP84243 SNORD36C-201ENST00000516733 66 ntBASIC-1□□□□□ -2.57
H3F3AP84243 AC024933.1-201ENST00000608472 348 ntBASIC-1□□□□□ -2.57
H3F3AP84243 DISC2.1-201ENST00000612827 205 ntBASIC-1□□□□□ -2.57
H3F3AP84243 AC093726.3-201ENST00000637588 150 ntBASIC-1□□□□□ -2.57
H3F3AP84243 SNORD116-9-201ENST00000384000 95 ntBASIC-1.01□□□□□ -2.57
H3F3AP84243 SNORD116-3-201ENST00000384287 95 ntBASIC-1.01□□□□□ -2.57
H3F3AP84243 SNORD116-8-201ENST00000384365 95 ntBASIC-1.01□□□□□ -2.57
H3F3AP84243 SNORD116-7-201ENST00000384404 95 ntBASIC-1.01□□□□□ -2.57
H3F3AP84243 SNORD116-5-201ENST00000384462 95 ntBASIC-1.01□□□□□ -2.57
H3F3AP84243 SNORD77.3-201ENST00000391113 65 ntBASIC-1.01□□□□□ -2.57
H3F3AP84243 AF228730.4-201ENST00000421457 183 ntBASIC-1.01□□□□□ -2.57
H3F3AP84243 SNORD5.1-201ENST00000458800 75 ntBASIC-1.01□□□□□ -2.57
H3F3AP84243 AC074198.2-201ENST00000508153 258 ntBASIC-1.01□□□□□ -2.57
H3F3AP84243 MIR3942-201ENST00000585264 109 ntBASIC-1.01□□□□□ -2.57
H3F3AP84243 MIR6717-201ENST00000622747 73 ntBASIC-1.01□□□□□ -2.57
H3F3AP84243 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.02□□□□□ -2.57
H3F3AP84243 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.02□□□□□ -2.57
H3F3AP84243 RNU6-20P-201ENST00000384106 107 ntBASIC-1.02□□□□□ -2.57
H3F3AP84243 SNORA75-201ENST00000384158 137 ntBASIC-1.02□□□□□ -2.57
H3F3AP84243 MIR626-201ENST00000385032 94 ntBASIC-1.02□□□□□ -2.57
H3F3AP84243 MIR204-201ENST00000385200 110 ntBASIC-1.02□□□□□ -2.57
H3F3AP84243 SNORD41.1-201ENST00000391000 69 ntBASIC-1.02□□□□□ -2.57
H3F3AP84243 RNU6-735P-201ENST00000410612 107 ntBASIC-1.02□□□□□ -2.57
H3F3AP84243 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.02□□□□□ -2.57
H3F3AP84243 MIR2355-201ENST00000517199 87 ntBASIC-1.02□□□□□ -2.57
H3F3AP84243 AC122108.2-201ENST00000611946 526 ntBASIC-1.02□□□□□ -2.57
H3F3AP84243 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.03□□□□□ -2.57
H3F3AP84243 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.03□□□□□ -2.57
H3F3AP84243 MTND2P22-201ENST00000444325 1033 ntBASIC-1.03□□□□□ -2.57
H3F3AP84243 MIR4473-201ENST00000583731 91 ntBASIC-1.03□□□□□ -2.57
H3F3AP84243 AC022960.3-201ENST00000619794 441 ntBASIC-1.03□□□□□ -2.57
H3F3AP84243 MIR6863-201ENST00000636112 90 ntBASIC-1.03□□□□□ -2.57
H3F3AP84243 RNU6-626P-201ENST00000363354 107 ntBASIC-1.04□□□□□ -2.58
H3F3AP84243 RNU6-949P-201ENST00000384040 107 ntBASIC-1.04□□□□□ -2.58
H3F3AP84243 MIR196A1-201ENST00000388006 70 ntBASIC-1.04□□□□□ -2.58
H3F3AP84243 SNORA26.6-201ENST00000391256 115 ntBASIC-1.04□□□□□ -2.58
H3F3AP84243 FCF1P4-201ENST00000448326 183 ntBASIC-1.04□□□□□ -2.58
H3F3AP84243 AC098826.2-201ENST00000452011 651 ntBASIC-1.04□□□□□ -2.58
H3F3AP84243 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.04□□□□□ -2.58
H3F3AP84243 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.04□□□□□ -2.58
H3F3AP84243 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.04□□□□□ -2.58
H3F3AP84243 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 RNA5SP403-201ENST00000363598 108 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 SNORA36B-201ENST00000410438 131 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 AC074085.1-201ENST00000413598 418 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 AC244505.6-201ENST00000452829 130 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 AL512360.1-201ENST00000555346 234 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 MIR4423-201ENST00000580922 80 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 AL360085.1-201ENST00000604713 532 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms