Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.19□□□□□ -2.06
HERVK_113P62684 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
HERVK_113P62684 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HERVK_113P62684 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HERVK_113P62684 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
HERVK_113P62684 AL596028.1-201ENST00000326971 197 ntBASIC2.18□□□□□ -2.06
HERVK_113P62684 RNA5SP276-201ENST00000362580 94 ntBASIC2.18□□□□□ -2.06
HERVK_113P62684 RNA5SP190-201ENST00000365222 118 ntBASIC2.18□□□□□ -2.06
HERVK_113P62684 MIR9-3-201ENST00000385084 90 ntBASIC2.18□□□□□ -2.06
HERVK_113P62684 MIR516B2-201ENST00000385190 85 ntBASIC2.18□□□□□ -2.06
HERVK_113P62684 RN7SKP179-201ENST00000516126 217 ntBASIC2.18□□□□□ -2.06
HERVK_113P62684 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.18□□□□□ -2.06
HERVK_113P62684 SNORA31.17-201ENST00000516953 127 ntBASIC2.18□□□□□ -2.06
HERVK_113P62684 MIR4778-201ENST00000577635 80 ntBASIC2.18□□□□□ -2.06
HERVK_113P62684 MIR3683-201ENST00000580847 82 ntBASIC2.18□□□□□ -2.06
HERVK_113P62684 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
HERVK_113P62684 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.18□□□□□ -2.06
HERVK_113P62684 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
HERVK_113P62684 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
HERVK_113P62684 RNU6-833P-201ENST00000363486 107 ntBASIC2.17□□□□□ -2.06
HERVK_113P62684 RNU4-52P-201ENST00000384209 138 ntBASIC2.17□□□□□ -2.06
HERVK_113P62684 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
HERVK_113P62684 SNORD13-201ENST00000459299 104 ntBASIC2.17□□□□□ -2.06
HERVK_113P62684 RNU6-1053P-201ENST00000515930 101 ntBASIC2.17□□□□□ -2.06
HERVK_113P62684 RNU6-772P-201ENST00000516042 105 ntBASIC2.17□□□□□ -2.06
HERVK_113P62684 SNORA18.7-201ENST00000516910 131 ntBASIC2.17□□□□□ -2.06
HERVK_113P62684 RNU7-70P-201ENST00000516941 66 ntBASIC2.17□□□□□ -2.06
HERVK_113P62684 AP003484.1-201ENST00000530974 250 ntBASIC2.17□□□□□ -2.06
HERVK_113P62684 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.17□□□□□ -2.06
HERVK_113P62684 AC084768.2-201ENST00000622736 221 ntBASIC2.17□□□□□ -2.06
HERVK_113P62684 SNORD3E-202ENST00000627253 216 ntBASIC2.17□□□□□ -2.06
HERVK_113P62684 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HERVK_113P62684 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
HERVK_113P62684 RNU6-457P-201ENST00000363999 107 ntBASIC2.16□□□□□ -2.06
HERVK_113P62684 RNU6-647P-201ENST00000364243 107 ntBASIC2.16□□□□□ -2.06
HERVK_113P62684 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HERVK_113P62684 AL627390.1-201ENST00000396055 340 ntBASIC2.16□□□□□ -2.06
HERVK_113P62684 Y_RNA.629-201ENST00000411368 105 ntBASIC2.16□□□□□ -2.06
HERVK_113P62684 Y_RNA.651-201ENST00000459380 103 ntBASIC2.16□□□□□ -2.06
HERVK_113P62684 RNA5SP236-201ENST00000516169 116 ntBASIC2.16□□□□□ -2.06
HERVK_113P62684 SNORA25.15-201ENST00000516487 89 ntBASIC2.16□□□□□ -2.06
HERVK_113P62684 SCARNA15-202ENST00000516881 127 ntBASIC2.16□□□□□ -2.06
HERVK_113P62684 MIR4287-201ENST00000579398 78 ntBASIC2.16□□□□□ -2.06
HERVK_113P62684 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.16□□□□□ -2.06
HERVK_113P62684 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.16□□□□□ -2.06
HERVK_113P62684 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HERVK_113P62684 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
HERVK_113P62684 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
HERVK_113P62684 RNU6-938P-201ENST00000411285 103 ntBASIC2.15□□□□□ -2.07
HERVK_113P62684 PGBD4P5-201ENST00000445958 426 ntBASIC2.15□□□□□ -2.07
HERVK_113P62684 AL513423.1-201ENST00000621695 132 ntBASIC2.15□□□□□ -2.07
HERVK_113P62684 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HERVK_113P62684 MIR342-201ENST00000362212 99 ntBASIC2.14□□□□□ -2.07
HERVK_113P62684 MIR452-201ENST00000385020 85 ntBASIC2.14□□□□□ -2.07
HERVK_113P62684 SUMO2P12-201ENST00000405924 140 ntBASIC2.14□□□□□ -2.07
HERVK_113P62684 AC087499.4-201ENST00000448505 178 ntBASIC2.14□□□□□ -2.07
HERVK_113P62684 AC099513.1-201ENST00000490423 301 ntBASIC2.14□□□□□ -2.07
HERVK_113P62684 RPS29P11-201ENST00000496507 171 ntBASIC2.14□□□□□ -2.07
HERVK_113P62684 RNA5SP364-201ENST00000516938 78 ntBASIC2.14□□□□□ -2.07
HERVK_113P62684 snoU13.31-201ENST00000607291 104 ntBASIC2.14□□□□□ -2.07
HERVK_113P62684 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.14□□□□□ -2.07
HERVK_113P62684 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HERVK_113P62684 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
HERVK_113P62684 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HERVK_113P62684 AC008555.8-201ENST00000623602 2168 ntBASIC2.13□□□□□ -2.07
HERVK_113P62684 AP000648.3-201ENST00000623539 4507 ntBASIC2.13□□□□□ -2.07
HERVK_113P62684 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.13□□□□□ -2.07
HERVK_113P62684 Y_RNA.241-201ENST00000364470 117 ntBASIC2.13□□□□□ -2.07
HERVK_113P62684 Y_RNA.280-201ENST00000364765 112 ntBASIC2.13□□□□□ -2.07
HERVK_113P62684 MIR660-201ENST00000385235 97 ntBASIC2.13□□□□□ -2.07
HERVK_113P62684 SNX2P2-201ENST00000424553 323 ntBASIC2.13□□□□□ -2.07
HERVK_113P62684 RNU6-250P-201ENST00000516958 103 ntBASIC2.13□□□□□ -2.07
HERVK_113P62684 RNU7-181P-201ENST00000517234 74 ntBASIC2.13□□□□□ -2.07
HERVK_113P62684 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.13□□□□□ -2.07
HERVK_113P62684 MIR8081-201ENST00000611533 95 ntBASIC2.13□□□□□ -2.07
HERVK_113P62684 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
HERVK_113P62684 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HERVK_113P62684 MIR378A-201ENST00000362177 66 ntBASIC2.12□□□□□ -2.07
HERVK_113P62684 Y_RNA.273-201ENST00000364703 102 ntBASIC2.12□□□□□ -2.07
HERVK_113P62684 Y_RNA.351-201ENST00000365436 96 ntBASIC2.12□□□□□ -2.07
HERVK_113P62684 Y_RNA.440-201ENST00000384120 114 ntBASIC2.12□□□□□ -2.07
HERVK_113P62684 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.12□□□□□ -2.07
HERVK_113P62684 RNU6-781P-201ENST00000516377 101 ntBASIC2.12□□□□□ -2.07
HERVK_113P62684 AC108081.1-201ENST00000604358 221 ntBASIC2.12□□□□□ -2.07
HERVK_113P62684 RNU1-133P-201ENST00000364867 167 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 SNORD58C-201ENST00000365223 64 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 Y_RNA.353-201ENST00000365440 108 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 MIR136-201ENST00000385207 82 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 SNORA40.5-201ENST00000391061 128 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 MIR1267-201ENST00000408723 78 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 RNA5SP489-201ENST00000410986 109 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 Y_RNA.630-201ENST00000411370 108 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 RPS27P21-201ENST00000486977 252 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 RN7SKP19-201ENST00000516016 252 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 Y_RNA.712-201ENST00000517011 92 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 MTND5P34-201ENST00000568888 325 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 uc_338.20-201ENST00000621563 178 ntBASIC2.11□□□□□ -2.07
HERVK_113P62684 MIR3914-2-201ENST00000637339 95 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms