Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MIR181B2-201ENST00000385004 89 ntBASIC-1.79□□□□□ -2.7
CKS1BP61024 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.79□□□□□ -2.7
CKS1BP61024 SCARNA18B-201ENST00000458806 135 ntBASIC-1.79□□□□□ -2.7
CKS1BP61024 SNORD11-201ENST00000459124 84 ntBASIC-1.79□□□□□ -2.7
CKS1BP61024 HAR1A.1-201ENST00000459583 118 ntBASIC-1.79□□□□□ -2.7
CKS1BP61024 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.79□□□□□ -2.7
CKS1BP61024 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.79□□□□□ -2.7
CKS1BP61024 RNA5SP401-201ENST00000515920 127 ntBASIC-1.79□□□□□ -2.7
CKS1BP61024 MIR6717-201ENST00000622747 73 ntBASIC-1.79□□□□□ -2.7
CKS1BP61024 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.8□□□□□ -2.7
CKS1BP61024 RNU6-318P-201ENST00000384283 103 ntBASIC-1.8□□□□□ -2.7
CKS1BP61024 MT-TY-201ENST00000387409 66 ntBASIC-1.8□□□□□ -2.7
CKS1BP61024 MIR190B-201ENST00000401119 79 ntBASIC-1.8□□□□□ -2.7
CKS1BP61024 RNU6-710P-201ENST00000410424 105 ntBASIC-1.8□□□□□ -2.7
CKS1BP61024 RNA5SP261-201ENST00000410536 106 ntBASIC-1.8□□□□□ -2.7
CKS1BP61024 RNU6-248P-201ENST00000410720 107 ntBASIC-1.8□□□□□ -2.7
CKS1BP61024 RNU6-938P-201ENST00000411285 103 ntBASIC-1.8□□□□□ -2.7
CKS1BP61024 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.8□□□□□ -2.7
CKS1BP61024 MIR4273-201ENST00000582824 84 ntBASIC-1.8□□□□□ -2.7
CKS1BP61024 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 SNORD115-2-201ENST00000362842 82 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 RNU6-900P-201ENST00000384498 102 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 SNORD56B-201ENST00000384713 71 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 SNORA26.6-201ENST00000391256 115 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 RNU6-436P-201ENST00000516171 114 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 RNU6-531P-201ENST00000516694 104 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 DEFB131E-201ENST00000532329 154 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 MIR3913-1-201ENST00000577744 102 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 AC018638.8-201ENST00000588755 281 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 AC004223.4-201ENST00000612426 332 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 uc_338.10-201ENST00000621872 182 ntBASIC-1.81□□□□□ -2.7
CKS1BP61024 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.82□□□□□ -2.7
CKS1BP61024 AL603914.1-201ENST00000401964 204 ntBASIC-1.82□□□□□ -2.7
CKS1BP61024 RNU6-998P-201ENST00000515894 101 ntBASIC-1.82□□□□□ -2.7
CKS1BP61024 AP003461.1-201ENST00000528866 78 ntBASIC-1.82□□□□□ -2.7
CKS1BP61024 RNU6-254P-201ENST00000363377 107 ntBASIC-1.83□□□□□ -2.7
CKS1BP61024 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.83□□□□□ -2.7
CKS1BP61024 RNU4-20P-201ENST00000365601 151 ntBASIC-1.83□□□□□ -2.7
CKS1BP61024 RNA5SP266-201ENST00000410273 108 ntBASIC-1.83□□□□□ -2.7
CKS1BP61024 AC074085.1-201ENST00000413598 418 ntBASIC-1.83□□□□□ -2.7
CKS1BP61024 RNU7-115P-201ENST00000516433 55 ntBASIC-1.83□□□□□ -2.7
CKS1BP61024 RNU6-706P-201ENST00000517229 104 ntBASIC-1.83□□□□□ -2.7
CKS1BP61024 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.84□□□□□ -2.7
CKS1BP61024 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.84□□□□□ -2.7
CKS1BP61024 SNORA72.3-201ENST00000365074 132 ntBASIC-1.84□□□□□ -2.7
CKS1BP61024 RNU6-721P-201ENST00000410155 105 ntBASIC-1.84□□□□□ -2.7
CKS1BP61024 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.84□□□□□ -2.7
CKS1BP61024 RNU6-408P-201ENST00000515910 100 ntBASIC-1.84□□□□□ -2.7
CKS1BP61024 RNU6-175P-201ENST00000516896 107 ntBASIC-1.84□□□□□ -2.7
CKS1BP61024 AC055872.1-201ENST00000570978 278 ntBASIC-1.84□□□□□ -2.7
CKS1BP61024 AC060780.3-201ENST00000589464 80 ntBASIC-1.84□□□□□ -2.7
CKS1BP61024 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.85□□□□□ -2.71
CKS1BP61024 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.85□□□□□ -2.71
CKS1BP61024 RNU6-597P-201ENST00000365620 102 ntBASIC-1.85□□□□□ -2.71
CKS1BP61024 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.85□□□□□ -2.71
CKS1BP61024 SNORD12B-201ENST00000410433 91 ntBASIC-1.85□□□□□ -2.71
CKS1BP61024 RNU7-74P-201ENST00000459104 62 ntBASIC-1.85□□□□□ -2.71
CKS1BP61024 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.85□□□□□ -2.71
CKS1BP61024 MIR4473-201ENST00000583731 91 ntBASIC-1.85□□□□□ -2.71
CKS1BP61024 AC022441.3-201ENST00000605737 136 ntBASIC-1.85□□□□□ -2.71
CKS1BP61024 AC087752.4-201ENST00000605911 462 ntBASIC-1.85□□□□□ -2.71
CKS1BP61024 AC091931.1-201ENST00000623488 728 ntBASIC-1.85□□□□□ -2.71
CKS1BP61024 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 SNORD116-9-201ENST00000384000 95 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 SNORD116-3-201ENST00000384287 95 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 SNORD116-8-201ENST00000384365 95 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 SNORD116-7-201ENST00000384404 95 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 SNORD116-5-201ENST00000384462 95 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 MIR626-201ENST00000385032 94 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 FCF1P4-201ENST00000448326 183 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 SNORD38.3-201ENST00000516599 73 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 MIR548AY-201ENST00000617669 107 ntBASIC-1.86□□□□□ -2.71
CKS1BP61024 MTND5P18-201ENST00000445624 1801 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 RNU4-50P-201ENST00000364361 141 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 MIR539-201ENST00000365690 78 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 MIR1278-201ENST00000408753 81 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 RNU7-87P-201ENST00000459343 62 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 MIR3179-1-201ENST00000578940 84 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 MIR3179-2-201ENST00000579107 84 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 MIR3179-3-201ENST00000579566 84 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 AC018645.2-201ENST00000609151 472 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 MIR3179-4-201ENST00000617599 84 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 AC007494.3-201ENST00000624660 743 ntBASIC-1.87□□□□□ -2.71
CKS1BP61024 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.88□□□□□ -2.71
CKS1BP61024 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.88□□□□□ -2.71
CKS1BP61024 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.88□□□□□ -2.71
CKS1BP61024 AL080274.1-201ENST00000605565 220 ntBASIC-1.88□□□□□ -2.71
CKS1BP61024 RNU6-86P-201ENST00000606534 107 ntBASIC-1.88□□□□□ -2.71
CKS1BP61024 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.88□□□□□ -2.71
CKS1BP61024 RNU6-961P-201ENST00000363893 105 ntBASIC-1.89□□□□□ -2.71
CKS1BP61024 SNORD115-44-201ENST00000365391 82 ntBASIC-1.89□□□□□ -2.71
CKS1BP61024 MIR514A2-201ENST00000385131 88 ntBASIC-1.89□□□□□ -2.71
CKS1BP61024 MIR514A3-201ENST00000385132 88 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms