Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-728P-201ENST00000365375 104 ntBASIC1.17□□□□□ -2.22
CDH11P55287 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.17□□□□□ -2.22
CDH11P55287 RNU7-41P-201ENST00000515917 61 ntBASIC1.17□□□□□ -2.22
CDH11P55287 SNORD111.1-201ENST00000516421 86 ntBASIC1.17□□□□□ -2.22
CDH11P55287 RN7SKP88-201ENST00000516847 250 ntBASIC1.17□□□□□ -2.22
CDH11P55287 7SK.8-201ENST00000612110 250 ntBASIC1.17□□□□□ -2.22
CDH11P55287 7SK.11-201ENST00000615477 250 ntBASIC1.17□□□□□ -2.22
CDH11P55287 7SK.13-201ENST00000622040 250 ntBASIC1.17□□□□□ -2.22
CDH11P55287 Y_RNA.23-201ENST00000362496 106 ntBASIC1.16□□□□□ -2.22
CDH11P55287 RNU6-200P-201ENST00000364743 107 ntBASIC1.16□□□□□ -2.22
CDH11P55287 RNU6-275P-201ENST00000364910 107 ntBASIC1.16□□□□□ -2.22
CDH11P55287 SNORA26-201ENST00000391286 122 ntBASIC1.16□□□□□ -2.22
CDH11P55287 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.16□□□□□ -2.22
CDH11P55287 RNU1-123P-201ENST00000458950 160 ntBASIC1.16□□□□□ -2.22
CDH11P55287 RNU6-138P-201ENST00000515952 107 ntBASIC1.16□□□□□ -2.22
CDH11P55287 RNU6-693P-201ENST00000516134 107 ntBASIC1.16□□□□□ -2.22
CDH11P55287 RNU7-181P-201ENST00000517234 74 ntBASIC1.16□□□□□ -2.22
CDH11P55287 AP001485.1-201ENST00000604799 199 ntBASIC1.16□□□□□ -2.22
CDH11P55287 MIR8070-201ENST00000616510 88 ntBASIC1.16□□□□□ -2.22
CDH11P55287 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CDH11P55287 SNORD115-28-201ENST00000363931 81 ntBASIC1.15□□□□□ -2.23
CDH11P55287 Y_RNA.297-201ENST00000364950 91 ntBASIC1.15□□□□□ -2.23
CDH11P55287 SNORA25.9-201ENST00000365087 128 ntBASIC1.15□□□□□ -2.23
CDH11P55287 Y_RNA.363-201ENST00000365529 113 ntBASIC1.15□□□□□ -2.23
CDH11P55287 Y_RNA.412-201ENST00000384001 104 ntBASIC1.15□□□□□ -2.23
CDH11P55287 Y_RNA.494-201ENST00000384432 111 ntBASIC1.15□□□□□ -2.23
CDH11P55287 Y_RNA.515-201ENST00000384535 112 ntBASIC1.15□□□□□ -2.23
CDH11P55287 MIR520C-201ENST00000385005 87 ntBASIC1.15□□□□□ -2.23
CDH11P55287 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.15□□□□□ -2.23
CDH11P55287 Y_RNA.644-201ENST00000459006 113 ntBASIC1.15□□□□□ -2.23
CDH11P55287 Y_RNA.674-201ENST00000516362 113 ntBASIC1.15□□□□□ -2.23
CDH11P55287 RNU6-504P-201ENST00000516568 104 ntBASIC1.15□□□□□ -2.23
CDH11P55287 AC090821.2-201ENST00000523552 176 ntBASIC1.15□□□□□ -2.23
CDH11P55287 PRELID3BP2-201ENST00000605362 201 ntBASIC1.15□□□□□ -2.23
CDH11P55287 U6.106-201ENST00000636360 105 ntBASIC1.15□□□□□ -2.23
CDH11P55287 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
CDH11P55287 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.14□□□□□ -2.23
CDH11P55287 Y_RNA.37-201ENST00000362606 108 ntBASIC1.14□□□□□ -2.23
CDH11P55287 Y_RNA.226-201ENST00000364337 114 ntBASIC1.14□□□□□ -2.23
CDH11P55287 RNU6-978P-201ENST00000364371 103 ntBASIC1.14□□□□□ -2.23
CDH11P55287 RNU4-70P-201ENST00000384579 139 ntBASIC1.14□□□□□ -2.23
CDH11P55287 RNU2-70P-201ENST00000410718 179 ntBASIC1.14□□□□□ -2.23
CDH11P55287 AF228730.3-201ENST00000436691 102 ntBASIC1.14□□□□□ -2.23
CDH11P55287 AC245047.7-201ENST00000440265 293 ntBASIC1.14□□□□□ -2.23
CDH11P55287 AC048334.1-201ENST00000477975 159 ntBASIC1.14□□□□□ -2.23
CDH11P55287 AC004223.1-201ENST00000479840 271 ntBASIC1.14□□□□□ -2.23
CDH11P55287 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
CDH11P55287 Y_RNA.797-201ENST00000515977 94 ntBASIC1.14□□□□□ -2.23
CDH11P55287 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
CDH11P55287 RNU6-1270P-201ENST00000517128 108 ntBASIC1.14□□□□□ -2.23
CDH11P55287 AC022559.1-201ENST00000520905 205 ntBASIC1.14□□□□□ -2.23
CDH11P55287 MRPS18CP4-201ENST00000535821 231 ntBASIC1.14□□□□□ -2.23
CDH11P55287 AC091895.1-201ENST00000624494 256 ntBASIC1.14□□□□□ -2.23
CDH11P55287 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
CDH11P55287 RNA5SP327-201ENST00000362494 101 ntBASIC1.13□□□□□ -2.23
CDH11P55287 RNU6-1020P-201ENST00000363684 107 ntBASIC1.13□□□□□ -2.23
CDH11P55287 Y_RNA.182-201ENST00000363880 111 ntBASIC1.13□□□□□ -2.23
CDH11P55287 SNORA24-201ENST00000384096 131 ntBASIC1.13□□□□□ -2.23
CDH11P55287 SNORA1-201ENST00000384107 130 ntBASIC1.13□□□□□ -2.23
CDH11P55287 Y_RNA.785-201ENST00000384290 109 ntBASIC1.13□□□□□ -2.23
CDH11P55287 MIR1287-201ENST00000408492 90 ntBASIC1.13□□□□□ -2.23
CDH11P55287 AC087499.4-201ENST00000448505 178 ntBASIC1.13□□□□□ -2.23
CDH11P55287 AL121914.1-201ENST00000450188 156 ntBASIC1.13□□□□□ -2.23
CDH11P55287 RPS29P29-201ENST00000456396 171 ntBASIC1.13□□□□□ -2.23
CDH11P55287 SNORA31.4-201ENST00000516049 129 ntBASIC1.13□□□□□ -2.23
CDH11P55287 RNU6-947P-201ENST00000516264 106 ntBASIC1.13□□□□□ -2.23
CDH11P55287 AC008133.2-201ENST00000624540 351 ntBASIC1.13□□□□□ -2.23
CDH11P55287 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CDH11P55287 Y_RNA.233-201ENST00000364407 101 ntBASIC1.12□□□□□ -2.23
CDH11P55287 Y_RNA.370-201ENST00000365589 108 ntBASIC1.12□□□□□ -2.23
CDH11P55287 Y_RNA.537-201ENST00000384626 109 ntBASIC1.12□□□□□ -2.23
CDH11P55287 MIR499A-201ENST00000384903 122 ntBASIC1.12□□□□□ -2.23
CDH11P55287 SNORA40.6-201ENST00000391153 128 ntBASIC1.12□□□□□ -2.23
CDH11P55287 MIR1302-7-201ENST00000408841 72 ntBASIC1.12□□□□□ -2.23
CDH11P55287 RPS26P48-201ENST00000491713 339 ntBASIC1.12□□□□□ -2.23
CDH11P55287 SNORA31.2-201ENST00000516019 134 ntBASIC1.12□□□□□ -2.23
CDH11P55287 RNU6-1219P-201ENST00000516143 112 ntBASIC1.12□□□□□ -2.23
CDH11P55287 Y_RNA.700-201ENST00000516806 100 ntBASIC1.12□□□□□ -2.23
CDH11P55287 AC134878.1-201ENST00000619901 243 ntBASIC1.12□□□□□ -2.23
CDH11P55287 MIR8065-201ENST00000620577 100 ntBASIC1.12□□□□□ -2.23
CDH11P55287 SNORA1.2-201ENST00000365189 134 ntBASIC1.11□□□□□ -2.23
CDH11P55287 RNU6-643P-201ENST00000384018 107 ntBASIC1.11□□□□□ -2.23
CDH11P55287 MIR570-201ENST00000384917 97 ntBASIC1.11□□□□□ -2.23
CDH11P55287 SNORD77.3-201ENST00000391113 65 ntBASIC1.11□□□□□ -2.23
CDH11P55287 RNU6-847P-201ENST00000411115 108 ntBASIC1.11□□□□□ -2.23
CDH11P55287 AL392103.1-201ENST00000447000 198 ntBASIC1.11□□□□□ -2.23
CDH11P55287 AL138752.1-201ENST00000452964 351 ntBASIC1.11□□□□□ -2.23
CDH11P55287 RPL39P39-201ENST00000455840 151 ntBASIC1.11□□□□□ -2.23
CDH11P55287 RNU7-120P-201ENST00000459334 63 ntBASIC1.11□□□□□ -2.23
CDH11P55287 SNORA18.4-201ENST00000516440 124 ntBASIC1.11□□□□□ -2.23
CDH11P55287 SNORD36C-201ENST00000516733 66 ntBASIC1.11□□□□□ -2.23
CDH11P55287 MIR378D2-201ENST00000580636 98 ntBASIC1.11□□□□□ -2.23
CDH11P55287 MIR3660-201ENST00000584845 100 ntBASIC1.11□□□□□ -2.23
CDH11P55287 AL365205.2-201ENST00000594586 68 ntBASIC1.11□□□□□ -2.23
CDH11P55287 MIR4791-201ENST00000607666 84 ntBASIC1.11□□□□□ -2.23
CDH11P55287 MIR376A2-201ENST00000636782 80 ntBASIC1.11□□□□□ -2.23
CDH11P55287 SNORD115-34-201ENST00000362441 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-12-201ENST00000362583 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-29-201ENST00000362834 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-9-201ENST00000362912 82 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms