Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL513534.2-201ENST00000603836 250 ntBASIC1.65□□□□□ -2.15
COPAP53621 AP001485.1-201ENST00000604799 199 ntBASIC1.65□□□□□ -2.15
COPAP53621 AC134878.1-201ENST00000619901 243 ntBASIC1.65□□□□□ -2.15
COPAP53621 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
COPAP53621 RNU6-978P-201ENST00000364371 103 ntBASIC1.64□□□□□ -2.15
COPAP53621 RNU6-597P-201ENST00000365620 102 ntBASIC1.64□□□□□ -2.15
COPAP53621 RNU6-804P-201ENST00000384286 107 ntBASIC1.64□□□□□ -2.15
COPAP53621 Y_RNA.542-201ENST00000384641 111 ntBASIC1.64□□□□□ -2.15
COPAP53621 MIR518F-201ENST00000384973 87 ntBASIC1.64□□□□□ -2.15
COPAP53621 SNORD37.2-201ENST00000391075 66 ntBASIC1.64□□□□□ -2.15
COPAP53621 RNU7-121P-201ENST00000516604 62 ntBASIC1.64□□□□□ -2.15
COPAP53621 AC007751.1-201ENST00000529260 376 ntBASIC1.64□□□□□ -2.15
COPAP53621 DNAJC19P2-201ENST00000593340 302 ntBASIC1.64□□□□□ -2.15
COPAP53621 AL645939.4-201ENST00000604495 135 ntBASIC1.64□□□□□ -2.15
COPAP53621 AL121890.5-201ENST00000620848 304 ntBASIC1.64□□□□□ -2.15
COPAP53621 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COPAP53621 SNORD116-18-201ENST00000383961 92 ntBASIC1.63□□□□□ -2.15
COPAP53621 RNU6-768P-201ENST00000384683 107 ntBASIC1.63□□□□□ -2.15
COPAP53621 MIR548A2-201ENST00000384956 97 ntBASIC1.63□□□□□ -2.15
COPAP53621 Y_RNA.580-201ENST00000391004 95 ntBASIC1.63□□□□□ -2.15
COPAP53621 RNU6-321P-201ENST00000410912 106 ntBASIC1.63□□□□□ -2.15
COPAP53621 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.63□□□□□ -2.15
COPAP53621 RNU7-95P-201ENST00000459222 64 ntBASIC1.63□□□□□ -2.15
COPAP53621 SNORA18.7-201ENST00000516910 131 ntBASIC1.63□□□□□ -2.15
COPAP53621 DNAJC19P9-201ENST00000555084 351 ntBASIC1.63□□□□□ -2.15
COPAP53621 MIR3129-201ENST00000581095 76 ntBASIC1.63□□□□□ -2.15
COPAP53621 MTND1P7-201ENST00000632801 297 ntBASIC1.63□□□□□ -2.15
COPAP53621 MIR6844-201ENST00000637122 62 ntBASIC1.63□□□□□ -2.15
COPAP53621 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COPAP53621 AL442644.1-201ENST00000454390 3105 ntBASIC1.63□□□□□ -2.15
COPAP53621 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COPAP53621 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
COPAP53621 SNORA1.2-201ENST00000365189 134 ntBASIC1.62□□□□□ -2.15
COPAP53621 U8.17-201ENST00000391292 132 ntBASIC1.62□□□□□ -2.15
COPAP53621 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.62□□□□□ -2.15
COPAP53621 AC087499.4-201ENST00000448505 178 ntBASIC1.62□□□□□ -2.15
COPAP53621 SNORA18.4-201ENST00000516440 124 ntBASIC1.62□□□□□ -2.15
COPAP53621 MIR3646-201ENST00000578301 84 ntBASIC1.62□□□□□ -2.15
COPAP53621 AL365205.2-201ENST00000594586 68 ntBASIC1.62□□□□□ -2.15
COPAP53621 Y_RNA.37-201ENST00000362606 108 ntBASIC1.61□□□□□ -2.15
COPAP53621 RNU6-60P-201ENST00000364792 103 ntBASIC1.61□□□□□ -2.15
COPAP53621 Y_RNA.410-201ENST00000383992 113 ntBASIC1.61□□□□□ -2.15
COPAP53621 SNORA1-201ENST00000384107 130 ntBASIC1.61□□□□□ -2.15
COPAP53621 SNORA75.5-201ENST00000391291 81 ntBASIC1.61□□□□□ -2.15
COPAP53621 RNA5SP247-201ENST00000411181 105 ntBASIC1.61□□□□□ -2.15
COPAP53621 RPS27P16-201ENST00000425758 201 ntBASIC1.61□□□□□ -2.15
COPAP53621 SNORD123-201ENST00000459473 70 ntBASIC1.61□□□□□ -2.15
COPAP53621 RNU4-57P-201ENST00000515980 135 ntBASIC1.61□□□□□ -2.15
COPAP53621 MIR4781-201ENST00000585250 76 ntBASIC1.61□□□□□ -2.15
COPAP53621 GHRLOS.1-201ENST00000610995 70 ntBASIC1.61□□□□□ -2.15
COPAP53621 AC021753.1-201ENST00000635724 168 ntBASIC1.61□□□□□ -2.15
COPAP53621 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
COPAP53621 RNU6-151P-201ENST00000364158 107 ntBASIC1.6□□□□□ -2.15
COPAP53621 RNU6-1130P-201ENST00000365434 107 ntBASIC1.6□□□□□ -2.15
COPAP53621 RNU6-1062P-201ENST00000383908 107 ntBASIC1.6□□□□□ -2.15
COPAP53621 Y_RNA.398-201ENST00000383952 99 ntBASIC1.6□□□□□ -2.15
COPAP53621 SNORD41-201ENST00000386967 70 ntBASIC1.6□□□□□ -2.15
COPAP53621 RNA5SP127-201ENST00000411051 133 ntBASIC1.6□□□□□ -2.15
COPAP53621 AF228730.3-201ENST00000436691 102 ntBASIC1.6□□□□□ -2.15
COPAP53621 RPL30P7-201ENST00000479312 323 ntBASIC1.6□□□□□ -2.15
COPAP53621 RNU6-1212P-201ENST00000517023 104 ntBASIC1.6□□□□□ -2.15
COPAP53621 SNORA74.3-201ENST00000517108 154 ntBASIC1.6□□□□□ -2.15
COPAP53621 RNU7-181P-201ENST00000517234 74 ntBASIC1.6□□□□□ -2.15
COPAP53621 AP003484.1-201ENST00000530974 250 ntBASIC1.6□□□□□ -2.15
COPAP53621 SNORD53B-201ENST00000577887 78 ntBASIC1.6□□□□□ -2.15
COPAP53621 AL357312.1-201ENST00000603879 298 ntBASIC1.6□□□□□ -2.15
COPAP53621 AL359821.1-201ENST00000605519 182 ntBASIC1.6□□□□□ -2.15
COPAP53621 AL512598.1-201ENST00000610158 273 ntBASIC1.6□□□□□ -2.15
COPAP53621 Y_RNA.778-201ENST00000620203 90 ntBASIC1.6□□□□□ -2.15
COPAP53621 Y_RNA.241-201ENST00000364470 117 ntBASIC1.59□□□□□ -2.15
COPAP53621 RNU6-1292P-201ENST00000383856 107 ntBASIC1.59□□□□□ -2.15
COPAP53621 RNU6-1189P-201ENST00000383958 107 ntBASIC1.59□□□□□ -2.15
COPAP53621 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.59□□□□□ -2.15
COPAP53621 AC107297.1-201ENST00000459991 176 ntBASIC1.59□□□□□ -2.15
COPAP53621 RNU6-947P-201ENST00000516264 106 ntBASIC1.59□□□□□ -2.15
COPAP53621 AL512310.8-201ENST00000550183 120 ntBASIC1.59□□□□□ -2.15
COPAP53621 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
COPAP53621 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.59□□□□□ -2.15
COPAP53621 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.59□□□□□ -2.15
COPAP53621 MIR3658-201ENST00000636291 56 ntBASIC1.59□□□□□ -2.15
COPAP53621 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
COPAP53621 AP000648.3-201ENST00000623539 4507 ntBASIC1.59□□□□□ -2.16
COPAP53621 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COPAP53621 RNU6-818P-201ENST00000364837 108 ntBASIC1.58□□□□□ -2.16
COPAP53621 RNU4-11P-201ENST00000365287 132 ntBASIC1.58□□□□□ -2.16
COPAP53621 RNU6-1067P-201ENST00000384752 107 ntBASIC1.58□□□□□ -2.16
COPAP53621 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.58□□□□□ -2.16
COPAP53621 RNU7-43P-201ENST00000516554 64 ntBASIC1.58□□□□□ -2.16
COPAP53621 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.58□□□□□ -2.16
COPAP53621 MIR3664-201ENST00000579074 99 ntBASIC1.58□□□□□ -2.16
COPAP53621 Y_RNA.370-201ENST00000365589 108 ntBASIC1.57□□□□□ -2.16
COPAP53621 MIR624-201ENST00000385217 97 ntBASIC1.57□□□□□ -2.16
COPAP53621 SNORD77.3-201ENST00000391113 65 ntBASIC1.57□□□□□ -2.16
COPAP53621 MIR1323-201ENST00000408090 73 ntBASIC1.57□□□□□ -2.16
COPAP53621 SNORD36C-201ENST00000516733 66 ntBASIC1.57□□□□□ -2.16
COPAP53621 RNU6-255P-201ENST00000516957 105 ntBASIC1.57□□□□□ -2.16
COPAP53621 MTND5P41-201ENST00000517498 206 ntBASIC1.57□□□□□ -2.16
COPAP53621 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.57□□□□□ -2.16
COPAP53621 SNORD115-34-201ENST00000362441 82 ntBASIC1.56□□□□□ -2.16
COPAP53621 SNORD115-12-201ENST00000362583 82 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms