Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SNORA51.10-201ENST00000384418 136 ntBASIC1.37□□□□□ -2.19
NEK3P51956 RNU2-70P-201ENST00000410718 179 ntBASIC1.37□□□□□ -2.19
NEK3P51956 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.37□□□□□ -2.19
NEK3P51956 RNU7-90P-201ENST00000459216 62 ntBASIC1.37□□□□□ -2.19
NEK3P51956 RNU7-21P-201ENST00000459430 62 ntBASIC1.37□□□□□ -2.19
NEK3P51956 RNU4-71P-201ENST00000516258 113 ntBASIC1.37□□□□□ -2.19
NEK3P51956 RNU7-181P-201ENST00000517234 74 ntBASIC1.37□□□□□ -2.19
NEK3P51956 AC109810.1-201ENST00000534066 224 ntBASIC1.37□□□□□ -2.19
NEK3P51956 SNORD115-40-201ENST00000606510 82 ntBASIC1.37□□□□□ -2.19
NEK3P51956 AL353770.2-201ENST00000620024 78 ntBASIC1.37□□□□□ -2.19
NEK3P51956 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
NEK3P51956 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
NEK3P51956 Y_RNA.327-201ENST00000365201 102 ntBASIC1.36□□□□□ -2.19
NEK3P51956 RNU6-728P-201ENST00000365375 104 ntBASIC1.36□□□□□ -2.19
NEK3P51956 SNORA79-201ENST00000408376 140 ntBASIC1.36□□□□□ -2.19
NEK3P51956 RNU6-693P-201ENST00000516134 107 ntBASIC1.36□□□□□ -2.19
NEK3P51956 AC134878.1-201ENST00000619901 243 ntBASIC1.36□□□□□ -2.19
NEK3P51956 Y_RNA.144-201ENST00000363521 113 ntBASIC1.35□□□□□ -2.19
NEK3P51956 SNORD27-201ENST00000363981 72 ntBASIC1.35□□□□□ -2.19
NEK3P51956 Y_RNA.634-201ENST00000364811 113 ntBASIC1.35□□□□□ -2.19
NEK3P51956 MIR200A-201ENST00000384875 90 ntBASIC1.35□□□□□ -2.19
NEK3P51956 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.35□□□□□ -2.19
NEK3P51956 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.35□□□□□ -2.19
NEK3P51956 SNRPGP8-201ENST00000454064 226 ntBASIC1.35□□□□□ -2.19
NEK3P51956 RNU1-123P-201ENST00000458950 160 ntBASIC1.35□□□□□ -2.19
NEK3P51956 RPS26P48-201ENST00000491713 339 ntBASIC1.35□□□□□ -2.19
NEK3P51956 MTND1P19-201ENST00000511780 315 ntBASIC1.35□□□□□ -2.19
NEK3P51956 MIR4791-201ENST00000607666 84 ntBASIC1.35□□□□□ -2.19
NEK3P51956 SEPT14P17-201ENST00000617978 177 ntBASIC1.35□□□□□ -2.19
NEK3P51956 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
NEK3P51956 Y_RNA.66-201ENST00000362862 102 ntBASIC1.34□□□□□ -2.19
NEK3P51956 Y_RNA.121-201ENST00000363309 113 ntBASIC1.34□□□□□ -2.19
NEK3P51956 Y_RNA.164-201ENST00000363709 102 ntBASIC1.34□□□□□ -2.19
NEK3P51956 Y_RNA.410-201ENST00000383992 113 ntBASIC1.34□□□□□ -2.19
NEK3P51956 MIR518F-201ENST00000384973 87 ntBASIC1.34□□□□□ -2.19
NEK3P51956 MT-TT-201ENST00000387460 66 ntBASIC1.34□□□□□ -2.19
NEK3P51956 SNORA40.5-201ENST00000391061 128 ntBASIC1.34□□□□□ -2.19
NEK3P51956 RNU4-43P-201ENST00000410628 137 ntBASIC1.34□□□□□ -2.19
NEK3P51956 AC002429.1-201ENST00000437672 148 ntBASIC1.34□□□□□ -2.19
NEK3P51956 MIR4781-201ENST00000585250 76 ntBASIC1.34□□□□□ -2.19
NEK3P51956 Y_RNA.199-201ENST00000364014 102 ntBASIC1.33□□□□□ -2.2
NEK3P51956 SNORA20.1-201ENST00000364790 130 ntBASIC1.33□□□□□ -2.2
NEK3P51956 SNORA24-201ENST00000384096 131 ntBASIC1.33□□□□□ -2.2
NEK3P51956 SNORD61-201ENST00000384252 73 ntBASIC1.33□□□□□ -2.2
NEK3P51956 Y_RNA.539-201ENST00000384635 107 ntBASIC1.33□□□□□ -2.2
NEK3P51956 SNORA75.2-201ENST00000391138 150 ntBASIC1.33□□□□□ -2.2
NEK3P51956 SNORA75.3-201ENST00000391231 150 ntBASIC1.33□□□□□ -2.2
NEK3P51956 MIR1185-1-201ENST00000408598 86 ntBASIC1.33□□□□□ -2.2
NEK3P51956 MRPL35P3-201ENST00000421557 364 ntBASIC1.33□□□□□ -2.2
NEK3P51956 AL392103.1-201ENST00000447000 198 ntBASIC1.33□□□□□ -2.2
NEK3P51956 RNU6-197P-201ENST00000516680 100 ntBASIC1.33□□□□□ -2.2
NEK3P51956 AC007751.1-201ENST00000529260 376 ntBASIC1.33□□□□□ -2.2
NEK3P51956 MIR3128-201ENST00000581957 66 ntBASIC1.33□□□□□ -2.2
NEK3P51956 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NEK3P51956 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.32□□□□□ -2.2
NEK3P51956 Y_RNA.37-201ENST00000362606 108 ntBASIC1.32□□□□□ -2.2
NEK3P51956 SNORD45.3-201ENST00000363836 72 ntBASIC1.32□□□□□ -2.2
NEK3P51956 RNY1-201ENST00000364228 113 ntBASIC1.32□□□□□ -2.2
NEK3P51956 Y_RNA.241-201ENST00000364470 117 ntBASIC1.32□□□□□ -2.2
NEK3P51956 RNU6-392P-201ENST00000364926 101 ntBASIC1.32□□□□□ -2.2
NEK3P51956 MIR548A2-201ENST00000384956 97 ntBASIC1.32□□□□□ -2.2
NEK3P51956 snoU13.16-201ENST00000459350 104 ntBASIC1.32□□□□□ -2.2
NEK3P51956 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
NEK3P51956 Y_RNA.673-201ENST00000516306 88 ntBASIC1.32□□□□□ -2.2
NEK3P51956 RNU6-453P-201ENST00000516819 85 ntBASIC1.32□□□□□ -2.2
NEK3P51956 MIR4744-201ENST00000581563 82 ntBASIC1.32□□□□□ -2.2
NEK3P51956 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
NEK3P51956 AC243994.1-201ENST00000618627 109 ntBASIC1.32□□□□□ -2.2
NEK3P51956 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NEK3P51956 Y_RNA.65-201ENST00000362846 100 ntBASIC1.31□□□□□ -2.2
NEK3P51956 Y_RNA.269-201ENST00000364685 89 ntBASIC1.31□□□□□ -2.2
NEK3P51956 Y_RNA.447-201ENST00000384184 113 ntBASIC1.31□□□□□ -2.2
NEK3P51956 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
NEK3P51956 Y_RNA.622-201ENST00000411091 108 ntBASIC1.31□□□□□ -2.2
NEK3P51956 MIR2115-201ENST00000516657 100 ntBASIC1.31□□□□□ -2.2
NEK3P51956 AP003484.1-201ENST00000530974 250 ntBASIC1.31□□□□□ -2.2
NEK3P51956 MIR6078-201ENST00000611069 100 ntBASIC1.31□□□□□ -2.2
NEK3P51956 AC012676.2-201ENST00000619258 186 ntBASIC1.31□□□□□ -2.2
NEK3P51956 AL391516.1-201ENST00000554380 2449 ntBASIC1.3□□□□□ -2.2
NEK3P51956 AC008163.1-202ENST00000636004 2889 ntBASIC1.3□□□□□ -2.2
NEK3P51956 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
NEK3P51956 Y_RNA.7-201ENST00000362352 102 ntBASIC1.3□□□□□ -2.2
NEK3P51956 SNORA25.3-201ENST00000363205 127 ntBASIC1.3□□□□□ -2.2
NEK3P51956 Y_RNA.238-201ENST00000364441 102 ntBASIC1.3□□□□□ -2.2
NEK3P51956 Y_RNA.477-201ENST00000384352 108 ntBASIC1.3□□□□□ -2.2
NEK3P51956 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
NEK3P51956 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.3□□□□□ -2.2
NEK3P51956 AP000942.4-201ENST00000604811 241 ntBASIC1.3□□□□□ -2.2
NEK3P51956 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
NEK3P51956 SNORD114-24-201ENST00000365029 72 ntBASIC1.29□□□□□ -2.2
NEK3P51956 RNU6-396P-201ENST00000365369 105 ntBASIC1.29□□□□□ -2.2
NEK3P51956 Y_RNA.542-201ENST00000384641 111 ntBASIC1.29□□□□□ -2.2
NEK3P51956 Y_RNA.618-201ENST00000410949 107 ntBASIC1.29□□□□□ -2.2
NEK3P51956 Y_RNA.626-201ENST00000411288 95 ntBASIC1.29□□□□□ -2.2
NEK3P51956 HSPE1P19-201ENST00000603327 295 ntBASIC1.29□□□□□ -2.2
NEK3P51956 MTND1P7-201ENST00000632801 297 ntBASIC1.29□□□□□ -2.2
NEK3P51956 Y_RNA.91-201ENST00000363042 107 ntBASIC1.28□□□□□ -2.2
NEK3P51956 Y_RNA.489-201ENST00000384410 101 ntBASIC1.28□□□□□ -2.2
NEK3P51956 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
NEK3P51956 MIR1302-7-201ENST00000408841 72 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 395.9 ms