Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU1-91P-201ENST00000364746 163 ntBASIC2.72□□□□□ -1.97
USP11P51784 RNU6-1134P-201ENST00000365156 101 ntBASIC2.72□□□□□ -1.97
USP11P51784 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
USP11P51784 SNORD38C-201ENST00000384381 69 ntBASIC2.72□□□□□ -1.97
USP11P51784 MIR577-201ENST00000385196 96 ntBASIC2.72□□□□□ -1.97
USP11P51784 MIR1261-201ENST00000408659 82 ntBASIC2.72□□□□□ -1.97
USP11P51784 Y_RNA.601-201ENST00000410500 113 ntBASIC2.72□□□□□ -1.97
USP11P51784 Y_RNA.685-201ENST00000516532 108 ntBASIC2.72□□□□□ -1.97
USP11P51784 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.72□□□□□ -1.97
USP11P51784 MIR548Z-201ENST00000584743 97 ntBASIC2.72□□□□□ -1.97
USP11P51784 AC012531.4-201ENST00000616509 177 ntBASIC2.72□□□□□ -1.97
USP11P51784 AC021613.1-201ENST00000623880 111 ntBASIC2.72□□□□□ -1.97
USP11P51784 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.72□□□□□ -1.97
USP11P51784 RNU6-363P-201ENST00000362895 105 ntBASIC2.71□□□□□ -1.98
USP11P51784 SNORD115-19-201ENST00000363098 82 ntBASIC2.71□□□□□ -1.98
USP11P51784 SNORD115-18-201ENST00000363293 82 ntBASIC2.71□□□□□ -1.98
USP11P51784 SNORD115-17-201ENST00000364612 82 ntBASIC2.71□□□□□ -1.98
USP11P51784 RNU6-163P-201ENST00000384396 106 ntBASIC2.71□□□□□ -1.98
USP11P51784 MIR605-201ENST00000385078 83 ntBASIC2.71□□□□□ -1.98
USP11P51784 RNA5SP181-201ENST00000410246 98 ntBASIC2.71□□□□□ -1.98
USP11P51784 AC011753.1-201ENST00000451001 220 ntBASIC2.71□□□□□ -1.98
USP11P51784 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.71□□□□□ -1.98
USP11P51784 RNU7-45P-201ENST00000459460 63 ntBASIC2.71□□□□□ -1.98
USP11P51784 AC234781.5-201ENST00000508429 271 ntBASIC2.71□□□□□ -1.98
USP11P51784 AC008413.1-201ENST00000511864 177 ntBASIC2.71□□□□□ -1.98
USP11P51784 RNU7-61P-201ENST00000515897 61 ntBASIC2.71□□□□□ -1.98
USP11P51784 RNU6-795P-201ENST00000516323 103 ntBASIC2.71□□□□□ -1.98
USP11P51784 RNA5SP24-201ENST00000516478 95 ntBASIC2.71□□□□□ -1.98
USP11P51784 SNORA31.11-201ENST00000516528 139 ntBASIC2.71□□□□□ -1.98
USP11P51784 RNU6-1258P-201ENST00000516911 111 ntBASIC2.71□□□□□ -1.98
USP11P51784 RNU7-181P-201ENST00000517234 74 ntBASIC2.71□□□□□ -1.98
USP11P51784 AC046143.2-201ENST00000609789 160 ntBASIC2.71□□□□□ -1.98
USP11P51784 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.71□□□□□ -1.98
USP11P51784 Y_RNA.17-201ENST00000362433 111 ntBASIC2.7□□□□□ -1.98
USP11P51784 RNU6-23P-201ENST00000363283 107 ntBASIC2.7□□□□□ -1.98
USP11P51784 Y_RNA.360-201ENST00000365512 102 ntBASIC2.7□□□□□ -1.98
USP11P51784 SNORD78.1-201ENST00000390866 65 ntBASIC2.7□□□□□ -1.98
USP11P51784 RNU6-644P-201ENST00000391155 98 ntBASIC2.7□□□□□ -1.98
USP11P51784 AC015922.2-201ENST00000435593 184 ntBASIC2.7□□□□□ -1.98
USP11P51784 AC022202.1-201ENST00000613515 211 ntBASIC2.7□□□□□ -1.98
USP11P51784 U4atac.1-201ENST00000618345 95 ntBASIC2.7□□□□□ -1.98
USP11P51784 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
USP11P51784 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USP11P51784 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
USP11P51784 MIR21-201ENST00000362134 72 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-34-201ENST00000362441 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-12-201ENST00000362583 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-29-201ENST00000362834 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-9-201ENST00000362912 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-21-201ENST00000362963 81 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-14-201ENST00000363090 81 ntBASIC2.69□□□□□ -1.98
USP11P51784 RNU6-832P-201ENST00000363319 107 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-13-201ENST00000363358 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-41-201ENST00000363608 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-11-201ENST00000363616 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-5-201ENST00000363633 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-39-201ENST00000363694 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 Y_RNA.171-201ENST00000363760 102 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-4-201ENST00000363810 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-16-201ENST00000363887 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-6-201ENST00000363942 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-42-201ENST00000364273 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-15-201ENST00000364809 81 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-1-201ENST00000364961 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-26-201ENST00000365067 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-10-201ENST00000365073 81 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-43-201ENST00000365503 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 SNORD115-36-201ENST00000365629 82 ntBASIC2.69□□□□□ -1.98
USP11P51784 MIR524-201ENST00000385242 87 ntBASIC2.69□□□□□ -1.98
USP11P51784 AL035398.1-201ENST00000430869 322 ntBASIC2.69□□□□□ -1.98
USP11P51784 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.69□□□□□ -1.98
USP11P51784 HSPE1P9-201ENST00000440046 311 ntBASIC2.69□□□□□ -1.98
USP11P51784 RNU7-96P-201ENST00000459535 64 ntBASIC2.69□□□□□ -1.98
USP11P51784 AC090821.2-201ENST00000523552 176 ntBASIC2.69□□□□□ -1.98
USP11P51784 MIR4658-201ENST00000584344 65 ntBASIC2.69□□□□□ -1.98
USP11P51784 AC027279.3-201ENST00000625055 122 ntBASIC2.69□□□□□ -1.98
USP11P51784 AC080100.1-201ENST00000624239 5356 ntBASIC2.69□□□□□ -1.98
USP11P51784 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
USP11P51784 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP11P51784 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP11P51784 RNA5SP289-201ENST00000362332 137 ntBASIC2.68□□□□□ -1.98
USP11P51784 RNU6-170P-201ENST00000362832 104 ntBASIC2.68□□□□□ -1.98
USP11P51784 Y_RNA.155-201ENST00000363632 101 ntBASIC2.68□□□□□ -1.98
USP11P51784 Y_RNA.219-201ENST00000364232 113 ntBASIC2.68□□□□□ -1.98
USP11P51784 SNORA70B-201ENST00000384210 135 ntBASIC2.68□□□□□ -1.98
USP11P51784 Y_RNA.507-201ENST00000384500 99 ntBASIC2.68□□□□□ -1.98
USP11P51784 U8.16-201ENST00000391279 133 ntBASIC2.68□□□□□ -1.98
USP11P51784 AL022718.1-201ENST00000412004 84 ntBASIC2.68□□□□□ -1.98
USP11P51784 RNU2-11P-201ENST00000459191 187 ntBASIC2.68□□□□□ -1.98
USP11P51784 MIR1270-201ENST00000459320 83 ntBASIC2.68□□□□□ -1.98
USP11P51784 IGLV3-17-201ENST00000519099 244 ntBASIC2.68□□□□□ -1.98
USP11P51784 AC121758.2-201ENST00000553271 193 ntBASIC2.68□□□□□ -1.98
USP11P51784 MIR4694-201ENST00000578534 80 ntBASIC2.68□□□□□ -1.98
USP11P51784 MIR5007-201ENST00000583098 95 ntBASIC2.68□□□□□ -1.98
USP11P51784 AC064859.1-201ENST00000624741 174 ntBASIC2.68□□□□□ -1.98
USP11P51784 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
USP11P51784 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
USP11P51784 SNORD115-3-201ENST00000363100 82 ntBASIC2.67□□□□□ -1.98
USP11P51784 SNORD114-30-201ENST00000364448 72 ntBASIC2.67□□□□□ -1.98
USP11P51784 RNU4-67P-201ENST00000364569 141 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms