Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CLK2P49760 RNU6-832P-201ENST00000363319 107 ntBASIC3.12□□□□□ -1.91
CLK2P49760 MIR577-201ENST00000385196 96 ntBASIC3.12□□□□□ -1.91
CLK2P49760 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.12□□□□□ -1.91
CLK2P49760 RNU6-1190P-201ENST00000410811 104 ntBASIC3.12□□□□□ -1.91
CLK2P49760 RPL23AP6-201ENST00000446637 472 ntBASIC3.12□□□□□ -1.91
CLK2P49760 AC108938.1-201ENST00000451204 136 ntBASIC3.12□□□□□ -1.91
CLK2P49760 MIR3605-201ENST00000583214 100 ntBASIC3.12□□□□□ -1.91
CLK2P49760 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLK2P49760 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLK2P49760 AC062016.1-201ENST00000355719 319 ntBASIC3.11□□□□□ -1.91
CLK2P49760 RNU6-913P-201ENST00000390913 95 ntBASIC3.11□□□□□ -1.91
CLK2P49760 RPL12P50-201ENST00000603116 116 ntBASIC3.11□□□□□ -1.91
CLK2P49760 AL161431.1-201ENST00000618966 4205 ntBASIC3.11□□□□□ -1.91
CLK2P49760 RNU6-616P-201ENST00000384353 107 ntBASIC3.1□□□□□ -1.91
CLK2P49760 Y_RNA.510-201ENST00000384511 114 ntBASIC3.1□□□□□ -1.91
CLK2P49760 MIR605-201ENST00000385078 83 ntBASIC3.1□□□□□ -1.91
CLK2P49760 SNORA7.5-201ENST00000410672 110 ntBASIC3.1□□□□□ -1.91
CLK2P49760 SNORA9.3-201ENST00000516383 129 ntBASIC3.1□□□□□ -1.91
CLK2P49760 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.1□□□□□ -1.91
CLK2P49760 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.1□□□□□ -1.91
CLK2P49760 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.1□□□□□ -1.91
CLK2P49760 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.1□□□□□ -1.91
CLK2P49760 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.09□□□□□ -1.91
CLK2P49760 RNA5SP100-201ENST00000410903 110 ntBASIC3.09□□□□□ -1.91
CLK2P49760 RNA5SP59-201ENST00000410922 110 ntBASIC3.09□□□□□ -1.91
CLK2P49760 snoU13.16-201ENST00000459350 104 ntBASIC3.09□□□□□ -1.91
CLK2P49760 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.09□□□□□ -1.91
CLK2P49760 SNORA74.3-201ENST00000517108 154 ntBASIC3.09□□□□□ -1.91
CLK2P49760 MIR4319-201ENST00000577285 85 ntBASIC3.09□□□□□ -1.91
CLK2P49760 MIR4529-201ENST00000578110 78 ntBASIC3.09□□□□□ -1.91
CLK2P49760 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.09□□□□□ -1.91
CLK2P49760 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.09□□□□□ -1.91
CLK2P49760 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.09□□□□□ -1.91
CLK2P49760 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.09□□□□□ -1.91
CLK2P49760 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLK2P49760 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLK2P49760 RNU1-138P-201ENST00000384093 164 ntBASIC3.08□□□□□ -1.92
CLK2P49760 RNA5SP450-201ENST00000411206 102 ntBASIC3.08□□□□□ -1.92
CLK2P49760 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.08□□□□□ -1.92
CLK2P49760 SNORD109B-201ENST00000458961 67 ntBASIC3.08□□□□□ -1.92
CLK2P49760 SNORD109A-201ENST00000459128 67 ntBASIC3.08□□□□□ -1.92
CLK2P49760 RNA5SP57-201ENST00000459463 123 ntBASIC3.08□□□□□ -1.92
CLK2P49760 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK2P49760 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.07□□□□□ -1.92
CLK2P49760 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLK2P49760 SNORA5B-201ENST00000363786 132 ntBASIC3.07□□□□□ -1.92
CLK2P49760 RNU6-457P-201ENST00000363999 107 ntBASIC3.07□□□□□ -1.92
CLK2P49760 SNORA1.1-201ENST00000364671 133 ntBASIC3.07□□□□□ -1.92
CLK2P49760 Y_RNA.388-201ENST00000383919 113 ntBASIC3.07□□□□□ -1.92
CLK2P49760 SNORA18-201ENST00000384416 132 ntBASIC3.07□□□□□ -1.92
CLK2P49760 RNU7-43P-201ENST00000516554 64 ntBASIC3.07□□□□□ -1.92
CLK2P49760 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CLK2P49760 RNU6-1123P-201ENST00000362347 106 ntBASIC3.06□□□□□ -1.92
CLK2P49760 RNU6-1134P-201ENST00000365156 101 ntBASIC3.06□□□□□ -1.92
CLK2P49760 SNORA32-201ENST00000384072 121 ntBASIC3.06□□□□□ -1.92
CLK2P49760 RNU6-360P-201ENST00000390944 104 ntBASIC3.06□□□□□ -1.92
CLK2P49760 RNU6-679P-201ENST00000391003 106 ntBASIC3.06□□□□□ -1.92
CLK2P49760 AC096949.1-201ENST00000412047 152 ntBASIC3.06□□□□□ -1.92
CLK2P49760 AC004941.2-201ENST00000427009 228 ntBASIC3.06□□□□□ -1.92
CLK2P49760 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.06□□□□□ -1.92
CLK2P49760 RNU6-1018P-201ENST00000516577 106 ntBASIC3.06□□□□□ -1.92
CLK2P49760 SNORA31.17-201ENST00000516953 127 ntBASIC3.06□□□□□ -1.92
CLK2P49760 SNORA31.25-201ENST00000517242 134 ntBASIC3.06□□□□□ -1.92
CLK2P49760 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CLK2P49760 RNU6-170P-201ENST00000362832 104 ntBASIC3.05□□□□□ -1.92
CLK2P49760 SNORA3A-201ENST00000364113 130 ntBASIC3.05□□□□□ -1.92
CLK2P49760 SNORD45B-201ENST00000364617 72 ntBASIC3.05□□□□□ -1.92
CLK2P49760 Y_RNA.377-201ENST00000365644 108 ntBASIC3.05□□□□□ -1.92
CLK2P49760 MIR634-201ENST00000385208 97 ntBASIC3.05□□□□□ -1.92
CLK2P49760 MIR23A-201ENST00000385245 73 ntBASIC3.05□□□□□ -1.92
CLK2P49760 AL023284.1-201ENST00000403956 276 ntBASIC3.05□□□□□ -1.92
CLK2P49760 RNA5SP184-201ENST00000411071 108 ntBASIC3.05□□□□□ -1.92
CLK2P49760 MIR1270-201ENST00000459320 83 ntBASIC3.05□□□□□ -1.92
CLK2P49760 RNU7-61P-201ENST00000515897 61 ntBASIC3.05□□□□□ -1.92
CLK2P49760 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLK2P49760 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
CLK2P49760 RNU6-859P-201ENST00000362728 107 ntBASIC3.04□□□□□ -1.92
CLK2P49760 Y_RNA.96-201ENST00000363092 109 ntBASIC3.04□□□□□ -1.92
CLK2P49760 RNU1-52P-201ENST00000384190 164 ntBASIC3.04□□□□□ -1.92
CLK2P49760 HMGN1P33-201ENST00000432945 451 ntBASIC3.04□□□□□ -1.92
CLK2P49760 AL353813.1-201ENST00000440700 253 ntBASIC3.04□□□□□ -1.92
CLK2P49760 RNU6-795P-201ENST00000516323 103 ntBASIC3.04□□□□□ -1.92
CLK2P49760 RNA5SP282-201ENST00000516355 108 ntBASIC3.04□□□□□ -1.92
CLK2P49760 RNU6-521P-201ENST00000516663 105 ntBASIC3.04□□□□□ -1.92
CLK2P49760 AC026421.1-201ENST00000519101 163 ntBASIC3.04□□□□□ -1.92
CLK2P49760 MIR3162-201ENST00000581818 82 ntBASIC3.04□□□□□ -1.92
CLK2P49760 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLK2P49760 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLK2P49760 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLK2P49760 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.03□□□□□ -1.92
CLK2P49760 RNU6-1201P-201ENST00000384227 107 ntBASIC3.03□□□□□ -1.92
CLK2P49760 MIR450A2-201ENST00000385022 100 ntBASIC3.03□□□□□ -1.92
CLK2P49760 MIR4672-201ENST00000583126 81 ntBASIC3.03□□□□□ -1.92
CLK2P49760 AC062037.1-201ENST00000605302 128 ntBASIC3.03□□□□□ -1.92
CLK2P49760 AC012531.4-201ENST00000616509 177 ntBASIC3.03□□□□□ -1.92
CLK2P49760 AC008133.2-201ENST00000624540 351 ntBASIC3.03□□□□□ -1.92
CLK2P49760 SCARNA4.1-201ENST00000628597 123 ntBASIC3.03□□□□□ -1.92
CLK2P49760 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLK2P49760 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms