Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 MIR29C-201ENST00000385231 88 ntBASIC1.68□□□□□ -2.14
THBS3P49746 SNORD12C-201ENST00000386307 89 ntBASIC1.68□□□□□ -2.14
THBS3P49746 HMGN2P32-201ENST00000444648 269 ntBASIC1.68□□□□□ -2.14
THBS3P49746 RN7SL274P-201ENST00000492268 272 ntBASIC1.68□□□□□ -2.14
THBS3P49746 RNU7-70P-201ENST00000516941 66 ntBASIC1.68□□□□□ -2.14
THBS3P49746 AC092881.1-201ENST00000638218 2733 ntBASIC1.68□□□□□ -2.14
THBS3P49746 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
THBS3P49746 Y_RNA.309-201ENST00000365046 111 ntBASIC1.67□□□□□ -2.14
THBS3P49746 SNORA4.2-201ENST00000365313 147 ntBASIC1.67□□□□□ -2.14
THBS3P49746 RNU6-32P-201ENST00000383948 107 ntBASIC1.67□□□□□ -2.14
THBS3P49746 RNY1P6-201ENST00000384193 109 ntBASIC1.67□□□□□ -2.14
THBS3P49746 RNU6-13P-201ENST00000384248 107 ntBASIC1.67□□□□□ -2.14
THBS3P49746 RNU6-12P-201ENST00000384604 107 ntBASIC1.67□□□□□ -2.14
THBS3P49746 RNU6-41P-201ENST00000384741 107 ntBASIC1.67□□□□□ -2.14
THBS3P49746 MT-TI-201ENST00000387365 69 ntBASIC1.67□□□□□ -2.14
THBS3P49746 MIR1283-2-201ENST00000408621 87 ntBASIC1.67□□□□□ -2.14
THBS3P49746 HMGN2P3-201ENST00000433603 273 ntBASIC1.67□□□□□ -2.14
THBS3P49746 HMGN2P5-201ENST00000436882 273 ntBASIC1.67□□□□□ -2.14
THBS3P49746 RNU6-412P-201ENST00000516434 106 ntBASIC1.67□□□□□ -2.14
THBS3P49746 SNORA18.7-201ENST00000516910 131 ntBASIC1.67□□□□□ -2.14
THBS3P49746 MIR4524B-201ENST00000581569 115 ntBASIC1.67□□□□□ -2.14
THBS3P49746 HSPE1P19-201ENST00000603327 295 ntBASIC1.67□□□□□ -2.14
THBS3P49746 AC021443.1-201ENST00000604478 211 ntBASIC1.67□□□□□ -2.14
THBS3P49746 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.67□□□□□ -2.14
THBS3P49746 AC091932.4-201ENST00000623386 200 ntBASIC1.67□□□□□ -2.14
THBS3P49746 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
THBS3P49746 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
THBS3P49746 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
THBS3P49746 SNORA63.5-201ENST00000363548 123 ntBASIC1.66□□□□□ -2.14
THBS3P49746 Y_RNA.198-201ENST00000364013 98 ntBASIC1.66□□□□□ -2.14
THBS3P49746 RNU1-133P-201ENST00000364867 167 ntBASIC1.66□□□□□ -2.14
THBS3P49746 Y_RNA.351-201ENST00000365436 96 ntBASIC1.66□□□□□ -2.14
THBS3P49746 RNU11-3P-201ENST00000391111 133 ntBASIC1.66□□□□□ -2.14
THBS3P49746 U8.16-201ENST00000391279 133 ntBASIC1.66□□□□□ -2.14
THBS3P49746 MIR1289-2-201ENST00000408360 111 ntBASIC1.66□□□□□ -2.14
THBS3P49746 RNVU1-2-201ENST00000516326 135 ntBASIC1.66□□□□□ -2.14
THBS3P49746 AC012493.3-201ENST00000604494 112 ntBASIC1.66□□□□□ -2.14
THBS3P49746 SNORA28-201ENST00000606769 126 ntBASIC1.66□□□□□ -2.14
THBS3P49746 MIR4679-1-201ENST00000637619 75 ntBASIC1.66□□□□□ -2.14
THBS3P49746 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
THBS3P49746 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
THBS3P49746 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
THBS3P49746 AL596211.1-201ENST00000569873 2277 ntBASIC1.65□□□□□ -2.14
THBS3P49746 MIR342-201ENST00000362212 99 ntBASIC1.65□□□□□ -2.15
THBS3P49746 RNU4-16P-201ENST00000364737 141 ntBASIC1.65□□□□□ -2.15
THBS3P49746 Y_RNA.298-201ENST00000364960 107 ntBASIC1.65□□□□□ -2.15
THBS3P49746 SNORA67.3-201ENST00000384366 140 ntBASIC1.65□□□□□ -2.15
THBS3P49746 SNORD38C-201ENST00000384381 69 ntBASIC1.65□□□□□ -2.15
THBS3P49746 MIR17-201ENST00000385012 84 ntBASIC1.65□□□□□ -2.15
THBS3P49746 SNX2P2-201ENST00000424553 323 ntBASIC1.65□□□□□ -2.15
THBS3P49746 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
THBS3P49746 AC087499.4-201ENST00000448505 178 ntBASIC1.65□□□□□ -2.15
THBS3P49746 RNA5SP233-201ENST00000459153 113 ntBASIC1.65□□□□□ -2.15
THBS3P49746 RNU6-830P-201ENST00000516353 107 ntBASIC1.65□□□□□ -2.15
THBS3P49746 SUMO2P16-201ENST00000519475 264 ntBASIC1.65□□□□□ -2.15
THBS3P49746 AC022523.2-201ENST00000561045 150 ntBASIC1.65□□□□□ -2.15
THBS3P49746 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.65□□□□□ -2.15
THBS3P49746 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.65□□□□□ -2.15
THBS3P49746 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
THBS3P49746 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
THBS3P49746 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
THBS3P49746 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
THBS3P49746 Y_RNA.163-201ENST00000363702 113 ntBASIC1.64□□□□□ -2.15
THBS3P49746 SNORA63D-201ENST00000364359 132 ntBASIC1.64□□□□□ -2.15
THBS3P49746 Y_RNA.362-201ENST00000365518 110 ntBASIC1.64□□□□□ -2.15
THBS3P49746 RNU6-424P-201ENST00000384367 105 ntBASIC1.64□□□□□ -2.15
THBS3P49746 Y_RNA.494-201ENST00000384432 111 ntBASIC1.64□□□□□ -2.15
THBS3P49746 RNU6-1104P-201ENST00000384723 104 ntBASIC1.64□□□□□ -2.15
THBS3P49746 U8.17-201ENST00000391292 132 ntBASIC1.64□□□□□ -2.15
THBS3P49746 AL023284.1-201ENST00000403956 276 ntBASIC1.64□□□□□ -2.15
THBS3P49746 AC015922.2-201ENST00000435593 184 ntBASIC1.64□□□□□ -2.15
THBS3P49746 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.64□□□□□ -2.15
THBS3P49746 snoU13.23-201ENST00000458863 104 ntBASIC1.64□□□□□ -2.15
THBS3P49746 RNU7-164P-201ENST00000459221 62 ntBASIC1.64□□□□□ -2.15
THBS3P49746 RPS29P24-201ENST00000486345 171 ntBASIC1.64□□□□□ -2.15
THBS3P49746 RNU7-123P-201ENST00000515911 60 ntBASIC1.64□□□□□ -2.15
THBS3P49746 RNU6-237P-201ENST00000515985 71 ntBASIC1.64□□□□□ -2.15
THBS3P49746 SNORA31.4-201ENST00000516049 129 ntBASIC1.64□□□□□ -2.15
THBS3P49746 RNA5SP137-201ENST00000516833 135 ntBASIC1.64□□□□□ -2.15
THBS3P49746 DEFB122-202ENST00000569013 197 ntBASIC1.64□□□□□ -2.15
THBS3P49746 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
THBS3P49746 AC027279.3-201ENST00000625055 122 ntBASIC1.64□□□□□ -2.15
THBS3P49746 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.64□□□□□ -2.15
THBS3P49746 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.64□□□□□ -2.15
THBS3P49746 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.63□□□□□ -2.15
THBS3P49746 RNU6-414P-201ENST00000363705 104 ntBASIC1.63□□□□□ -2.15
THBS3P49746 Y_RNA.213-201ENST00000364178 111 ntBASIC1.63□□□□□ -2.15
THBS3P49746 Y_RNA.241-201ENST00000364470 117 ntBASIC1.63□□□□□ -2.15
THBS3P49746 MIR518A2-201ENST00000384966 87 ntBASIC1.63□□□□□ -2.15
THBS3P49746 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
THBS3P49746 SUMO2P12-201ENST00000405924 140 ntBASIC1.63□□□□□ -2.15
THBS3P49746 RN7SKP200-201ENST00000410564 320 ntBASIC1.63□□□□□ -2.15
THBS3P49746 RNA5SP270-201ENST00000411361 118 ntBASIC1.63□□□□□ -2.15
THBS3P49746 RNU7-80P-201ENST00000459562 61 ntBASIC1.63□□□□□ -2.15
THBS3P49746 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.63□□□□□ -2.15
THBS3P49746 RPL39P34-201ENST00000477141 156 ntBASIC1.63□□□□□ -2.15
THBS3P49746 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.63□□□□□ -2.15
THBS3P49746 Y_RNA.677-201ENST00000516401 85 ntBASIC1.63□□□□□ -2.15
THBS3P49746 RNU2-35P-201ENST00000516446 142 ntBASIC1.63□□□□□ -2.15
THBS3P49746 RNA5SP168-201ENST00000516642 112 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms