Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RNU6-693P-201ENST00000516134 107 ntBASIC0.92□□□□□ -2.26
LHX1P48742 RNU6-327P-201ENST00000516270 127 ntBASIC0.92□□□□□ -2.26
LHX1P48742 AC007751.1-201ENST00000529260 376 ntBASIC0.92□□□□□ -2.26
LHX1P48742 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
LHX1P48742 MIR4282-201ENST00000583613 67 ntBASIC0.92□□□□□ -2.26
LHX1P48742 AC131055.1-201ENST00000584626 316 ntBASIC0.92□□□□□ -2.26
LHX1P48742 AC012433.1-201ENST00000588916 398 ntBASIC0.92□□□□□ -2.26
LHX1P48742 MTND1P7-201ENST00000632801 297 ntBASIC0.92□□□□□ -2.26
LHX1P48742 Y_RNA.122-201ENST00000363331 96 ntBASIC0.91□□□□□ -2.26
LHX1P48742 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
LHX1P48742 Y_RNA.304-201ENST00000365011 112 ntBASIC0.91□□□□□ -2.26
LHX1P48742 RNY3P5-201ENST00000384127 102 ntBASIC0.91□□□□□ -2.26
LHX1P48742 SNORA26-201ENST00000391286 122 ntBASIC0.91□□□□□ -2.26
LHX1P48742 AC087499.4-201ENST00000448505 178 ntBASIC0.91□□□□□ -2.26
LHX1P48742 PDCD5P2-201ENST00000507570 312 ntBASIC0.91□□□□□ -2.26
LHX1P48742 RNU2-13P-201ENST00000515909 113 ntBASIC0.91□□□□□ -2.26
LHX1P48742 RNU6-1299P-201ENST00000516316 100 ntBASIC0.91□□□□□ -2.26
LHX1P48742 MIR2115-201ENST00000516657 100 ntBASIC0.91□□□□□ -2.26
LHX1P48742 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.91□□□□□ -2.26
LHX1P48742 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
LHX1P48742 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.91□□□□□ -2.26
LHX1P48742 MIR6516-201ENST00000630554 81 ntBASIC0.91□□□□□ -2.26
LHX1P48742 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.9□□□□□ -2.26
LHX1P48742 SNORD115-34-201ENST00000362441 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-12-201ENST00000362583 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-29-201ENST00000362834 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-9-201ENST00000362912 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-21-201ENST00000362963 81 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-14-201ENST00000363090 81 ntBASIC0.9□□□□□ -2.27
LHX1P48742 Y_RNA.116-201ENST00000363292 103 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-13-201ENST00000363358 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-41-201ENST00000363608 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-11-201ENST00000363616 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-5-201ENST00000363633 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-39-201ENST00000363694 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-4-201ENST00000363810 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-16-201ENST00000363887 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-6-201ENST00000363942 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-42-201ENST00000364273 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-15-201ENST00000364809 81 ntBASIC0.9□□□□□ -2.27
LHX1P48742 Y_RNA.288-201ENST00000364854 92 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-1-201ENST00000364961 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-26-201ENST00000365067 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-10-201ENST00000365073 81 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-43-201ENST00000365503 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-36-201ENST00000365629 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD24-201ENST00000383884 75 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD61-201ENST00000384252 73 ntBASIC0.9□□□□□ -2.27
LHX1P48742 MIR518F-201ENST00000384973 87 ntBASIC0.9□□□□□ -2.27
LHX1P48742 RNU2-70P-201ENST00000410718 179 ntBASIC0.9□□□□□ -2.27
LHX1P48742 RNU2-38P-201ENST00000410856 79 ntBASIC0.9□□□□□ -2.27
LHX1P48742 RNU2-55P-201ENST00000411146 174 ntBASIC0.9□□□□□ -2.27
LHX1P48742 MTND2P23-201ENST00000422990 651 ntBASIC0.9□□□□□ -2.27
LHX1P48742 FABP5P4-201ENST00000437203 171 ntBASIC0.9□□□□□ -2.27
LHX1P48742 RPS29P1-201ENST00000465274 159 ntBASIC0.9□□□□□ -2.27
LHX1P48742 RNU6-504P-201ENST00000516568 104 ntBASIC0.9□□□□□ -2.27
LHX1P48742 RNU6-1270P-201ENST00000517128 108 ntBASIC0.9□□□□□ -2.27
LHX1P48742 MIR4698-201ENST00000577795 80 ntBASIC0.9□□□□□ -2.27
LHX1P48742 MIR548AO-201ENST00000579992 96 ntBASIC0.9□□□□□ -2.27
LHX1P48742 SNORD115-40-201ENST00000606510 82 ntBASIC0.9□□□□□ -2.27
LHX1P48742 AL365265.1-201ENST00000621045 234 ntBASIC0.9□□□□□ -2.27
LHX1P48742 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
LHX1P48742 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
LHX1P48742 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
LHX1P48742 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
LHX1P48742 snoU2_19.4-201ENST00000364329 80 ntBASIC0.89□□□□□ -2.27
LHX1P48742 RNU6-654P-201ENST00000364373 107 ntBASIC0.89□□□□□ -2.27
LHX1P48742 Y_RNA.277-201ENST00000364754 102 ntBASIC0.89□□□□□ -2.27
LHX1P48742 RNU6-396P-201ENST00000365369 105 ntBASIC0.89□□□□□ -2.27
LHX1P48742 MIR616-201ENST00000385293 97 ntBASIC0.89□□□□□ -2.27
LHX1P48742 MT-TT-201ENST00000387460 66 ntBASIC0.89□□□□□ -2.27
LHX1P48742 AL606845.1-201ENST00000404881 255 ntBASIC0.89□□□□□ -2.27
LHX1P48742 Y_RNA.622-201ENST00000411091 108 ntBASIC0.89□□□□□ -2.27
LHX1P48742 AC106800.4-201ENST00000614905 153 ntBASIC0.89□□□□□ -2.27
LHX1P48742 Y_RNA.37-201ENST00000362606 108 ntBASIC0.88□□□□□ -2.27
LHX1P48742 RNU6-888P-201ENST00000363010 101 ntBASIC0.88□□□□□ -2.27
LHX1P48742 Y_RNA.162-201ENST00000363683 102 ntBASIC0.88□□□□□ -2.27
LHX1P48742 Y_RNA.416-201ENST00000384014 113 ntBASIC0.88□□□□□ -2.27
LHX1P48742 Y_RNA.432-201ENST00000384087 111 ntBASIC0.88□□□□□ -2.27
LHX1P48742 MIR548A2-201ENST00000384956 97 ntBASIC0.88□□□□□ -2.27
LHX1P48742 MIR1302-3-201ENST00000408128 138 ntBASIC0.88□□□□□ -2.27
LHX1P48742 MIR548H3-201ENST00000408771 118 ntBASIC0.88□□□□□ -2.27
LHX1P48742 POLR2J4-204ENST00000418424 324 ntBASIC0.88□□□□□ -2.27
LHX1P48742 MTCYBP9-201ENST00000431021 303 ntBASIC0.88□□□□□ -2.27
LHX1P48742 SNORD127-201ENST00000458892 86 ntBASIC0.88□□□□□ -2.27
LHX1P48742 RNU7-67P-201ENST00000459003 62 ntBASIC0.88□□□□□ -2.27
LHX1P48742 SCARNA15.1-201ENST00000516384 125 ntBASIC0.88□□□□□ -2.27
LHX1P48742 AC036111.3-201ENST00000526389 112 ntBASIC0.88□□□□□ -2.27
LHX1P48742 MIR4719-201ENST00000585233 84 ntBASIC0.88□□□□□ -2.27
LHX1P48742 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
LHX1P48742 MIR6788-201ENST00000618842 66 ntBASIC0.88□□□□□ -2.27
LHX1P48742 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
LHX1P48742 Y_RNA.199-201ENST00000364014 102 ntBASIC0.87□□□□□ -2.27
LHX1P48742 SNORD113.3-201ENST00000364630 78 ntBASIC0.87□□□□□ -2.27
LHX1P48742 Y_RNA.262-201ENST00000364641 102 ntBASIC0.87□□□□□ -2.27
LHX1P48742 Y_RNA.634-201ENST00000364811 113 ntBASIC0.87□□□□□ -2.27
LHX1P48742 RNU4-17P-201ENST00000365598 141 ntBASIC0.87□□□□□ -2.27
LHX1P48742 RNU6-484P-201ENST00000384016 107 ntBASIC0.87□□□□□ -2.27
LHX1P48742 Y_RNA.494-201ENST00000384432 111 ntBASIC0.87□□□□□ -2.27
LHX1P48742 Y_RNA.556-201ENST00000384677 113 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms