Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SNORD38C-201ENST00000384381 69 ntBASIC0.93□□□□□ -2.26
BRCC3P46736 Y_RNA.547-201ENST00000384654 119 ntBASIC0.93□□□□□ -2.26
BRCC3P46736 SNORA8.3-201ENST00000384679 139 ntBASIC0.93□□□□□ -2.26
BRCC3P46736 U8.17-201ENST00000391292 132 ntBASIC0.93□□□□□ -2.26
BRCC3P46736 MIR1185-1-201ENST00000408598 86 ntBASIC0.93□□□□□ -2.26
BRCC3P46736 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.93□□□□□ -2.26
BRCC3P46736 SNRPGP8-201ENST00000454064 226 ntBASIC0.93□□□□□ -2.26
BRCC3P46736 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.93□□□□□ -2.26
BRCC3P46736 RNU6-561P-201ENST00000516222 102 ntBASIC0.93□□□□□ -2.26
BRCC3P46736 RNU6-1223P-201ENST00000517124 104 ntBASIC0.93□□□□□ -2.26
BRCC3P46736 AC012676.2-201ENST00000619258 186 ntBASIC0.93□□□□□ -2.26
BRCC3P46736 AC015726.2-201ENST00000620112 122 ntBASIC0.93□□□□□ -2.26
BRCC3P46736 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
BRCC3P46736 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
BRCC3P46736 Y_RNA.288-201ENST00000364854 92 ntBASIC0.92□□□□□ -2.26
BRCC3P46736 Y_RNA.304-201ENST00000365011 112 ntBASIC0.92□□□□□ -2.26
BRCC3P46736 RNU6-1138P-201ENST00000365359 106 ntBASIC0.92□□□□□ -2.26
BRCC3P46736 Y_RNA.352-201ENST00000365439 102 ntBASIC0.92□□□□□ -2.26
BRCC3P46736 AC002429.1-201ENST00000437672 148 ntBASIC0.92□□□□□ -2.26
BRCC3P46736 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.92□□□□□ -2.26
BRCC3P46736 Y_RNA.679-201ENST00000516416 91 ntBASIC0.92□□□□□ -2.26
BRCC3P46736 FAM71BP1-201ENST00000604431 523 ntBASIC0.92□□□□□ -2.26
BRCC3P46736 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.92□□□□□ -2.26
BRCC3P46736 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
BRCC3P46736 Y_RNA.91-201ENST00000363042 107 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 Y_RNA.193-201ENST00000363979 102 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 SNORD27-201ENST00000363981 72 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 Y_RNA.354-201ENST00000365448 111 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 SNORD61-201ENST00000384252 73 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 SNORA80D-201ENST00000384488 135 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 MIR548A2-201ENST00000384956 97 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 MIR802-201ENST00000390235 94 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 MIR548O-201ENST00000408583 114 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 RNU6-938P-201ENST00000411285 103 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 MIR3128-201ENST00000581957 66 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 U6.104-201ENST00000637979 90 ntBASIC0.91□□□□□ -2.26
BRCC3P46736 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
BRCC3P46736 RNA5SP264-201ENST00000363115 107 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 Y_RNA.292-201ENST00000364904 97 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 RNU6-484P-201ENST00000384016 107 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 RNU6-1228P-201ENST00000391014 107 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 RNU6-381P-201ENST00000391259 108 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 Y_RNA.622-201ENST00000411091 108 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 AC063976.4-201ENST00000421971 163 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 RNU7-21P-201ENST00000459430 62 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.9□□□□□ -2.27
BRCC3P46736 RNU2-13P-201ENST00000515909 113 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 RNA5SP436-201ENST00000516020 115 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 RNU7-43P-201ENST00000516554 64 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 AC008133.2-201ENST00000624540 351 ntBASIC0.9□□□□□ -2.27
BRCC3P46736 AC008163.1-202ENST00000636004 2889 ntBASIC0.89□□□□□ -2.27
BRCC3P46736 RNY4P28-201ENST00000365281 93 ntBASIC0.89□□□□□ -2.27
BRCC3P46736 MIR518F-201ENST00000384973 87 ntBASIC0.89□□□□□ -2.27
BRCC3P46736 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.89□□□□□ -2.27
BRCC3P46736 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.89□□□□□ -2.27
BRCC3P46736 MIR5688-201ENST00000580619 83 ntBASIC0.89□□□□□ -2.27
BRCC3P46736 AL442067.1-201ENST00000613261 223 ntBASIC0.89□□□□□ -2.27
BRCC3P46736 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.89□□□□□ -2.27
BRCC3P46736 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
BRCC3P46736 Y_RNA.65-201ENST00000362846 100 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 Y_RNA.66-201ENST00000362862 102 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
BRCC3P46736 SNORD58.1-201ENST00000391313 66 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 AL606845.1-201ENST00000404881 255 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 AC023449.1-201ENST00000454464 154 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 SNORD124-201ENST00000459577 104 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 RNU6-693P-201ENST00000516134 107 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.88□□□□□ -2.27
BRCC3P46736 MIR548AO-201ENST00000579992 96 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 AC062037.2-201ENST00000610137 73 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 MIR6515-201ENST00000619843 57 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 U4.1-201ENST00000620349 87 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 MTND1P7-201ENST00000632801 297 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 MIR4251-201ENST00000635819 61 ntBASIC0.88□□□□□ -2.27
BRCC3P46736 Y_RNA.60-201ENST00000362831 98 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 RNY1-201ENST00000364228 113 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 RNU6-654P-201ENST00000364373 107 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 Y_RNA.370-201ENST00000365589 108 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 MIR15B-201ENST00000385045 98 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 MIR616-201ENST00000385293 97 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 AL392103.1-201ENST00000447000 198 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 RNU6-1007P-201ENST00000516586 107 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 SNORD36C-201ENST00000516733 66 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 RNU6-1270P-201ENST00000517128 108 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 MIR4661-201ENST00000582720 75 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 MIR4791-201ENST00000607666 84 ntBASIC0.87□□□□□ -2.27
BRCC3P46736 MIR103A2-201ENST00000362154 78 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 Y_RNA.20-201ENST00000362479 113 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 SNORD45.3-201ENST00000363836 72 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 Y_RNA.634-201ENST00000364811 113 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 Y_RNA.307-201ENST00000365022 117 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 SNORD114-24-201ENST00000365029 72 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 Y_RNA.350-201ENST00000365409 98 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 Y_RNA.447-201ENST00000384184 113 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms