Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SNORD115-16-201ENST00000363887 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-6-201ENST00000363942 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-42-201ENST00000364273 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-15-201ENST00000364809 81 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-1-201ENST00000364961 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-26-201ENST00000365067 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-10-201ENST00000365073 81 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 RNA5SP190-201ENST00000365222 118 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-43-201ENST00000365503 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-36-201ENST00000365629 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORA67.5-201ENST00000391036 107 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 MIR1323-201ENST00000408090 73 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 Y_RNA.622-201ENST00000411091 108 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.15□□□□□ -2.23
NKX2-1P43699 AL354695.1-201ENST00000427935 228 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 AL121914.1-201ENST00000450188 156 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORA31.4-201ENST00000516049 129 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 RNU6-693P-201ENST00000516134 107 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD116-25-201ENST00000516517 92 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 RNU7-25P-201ENST00000516544 62 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 RNU6-548P-201ENST00000517083 115 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 MIR4764-201ENST00000580680 88 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 MIR4524B-201ENST00000581569 115 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 MIR548AR-201ENST00000582191 57 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-40-201ENST00000606510 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 AC098479.1-201ENST00000609225 154 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 Y_RNA.37-201ENST00000362606 108 ntBASIC1.14□□□□□ -2.23
NKX2-1P43699 U8.1-201ENST00000362843 134 ntBASIC1.14□□□□□ -2.23
NKX2-1P43699 MIR758-201ENST00000390227 88 ntBASIC1.14□□□□□ -2.23
NKX2-1P43699 RNU6-938P-201ENST00000411285 103 ntBASIC1.14□□□□□ -2.23
NKX2-1P43699 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.14□□□□□ -2.23
NKX2-1P43699 SNORD13-201ENST00000459299 104 ntBASIC1.14□□□□□ -2.23
NKX2-1P43699 RNU6-1219P-201ENST00000516143 112 ntBASIC1.14□□□□□ -2.23
NKX2-1P43699 MIR3646-201ENST00000578301 84 ntBASIC1.14□□□□□ -2.23
NKX2-1P43699 PRELID3BP2-201ENST00000605362 201 ntBASIC1.14□□□□□ -2.23
NKX2-1P43699 RNU4-84P-201ENST00000364200 139 ntBASIC1.13□□□□□ -2.23
NKX2-1P43699 MIR516B2-201ENST00000385190 85 ntBASIC1.13□□□□□ -2.23
NKX2-1P43699 MIR624-201ENST00000385217 97 ntBASIC1.13□□□□□ -2.23
NKX2-1P43699 RNU6-239P-201ENST00000390990 99 ntBASIC1.13□□□□□ -2.23
NKX2-1P43699 SNORA67.6-201ENST00000391093 99 ntBASIC1.13□□□□□ -2.23
NKX2-1P43699 AC108210.2-201ENST00000503681 201 ntBASIC1.13□□□□□ -2.23
NKX2-1P43699 SNORA31.24-201ENST00000517232 57 ntBASIC1.13□□□□□ -2.23
NKX2-1P43699 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
NKX2-1P43699 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
NKX2-1P43699 Y_RNA.555-201ENST00000384673 110 ntBASIC1.12□□□□□ -2.23
NKX2-1P43699 MIR520C-201ENST00000385005 87 ntBASIC1.12□□□□□ -2.23
NKX2-1P43699 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
NKX2-1P43699 Y_RNA.580-201ENST00000391004 95 ntBASIC1.12□□□□□ -2.23
NKX2-1P43699 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.12□□□□□ -2.23
NKX2-1P43699 Y_RNA.662-201ENST00000516028 97 ntBASIC1.12□□□□□ -2.23
NKX2-1P43699 RNU11-2P-201ENST00000516898 142 ntBASIC1.12□□□□□ -2.23
NKX2-1P43699 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.12□□□□□ -2.23
NKX2-1P43699 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
NKX2-1P43699 RNA5SP48-201ENST00000363969 126 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 Y_RNA.337-201ENST00000365312 102 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 MIR150-201ENST00000385048 84 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 MIR764-201ENST00000390811 85 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 RNU6-907P-201ENST00000390924 102 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 SNORD77.3-201ENST00000391113 65 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 AL591806.2-201ENST00000433122 173 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 AF228730.3-201ENST00000436691 102 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 AC245047.7-201ENST00000440265 293 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 AC107297.1-201ENST00000459991 176 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 RPS26P48-201ENST00000491713 339 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 AC107027.2-201ENST00000512197 115 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 RNU6-237P-201ENST00000515985 71 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 SNORA18.7-201ENST00000516910 131 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 AL096861.1-201ENST00000610899 123 ntBASIC1.11□□□□□ -2.23
NKX2-1P43699 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
NKX2-1P43699 RNA5SP327-201ENST00000362494 101 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 Y_RNA.180-201ENST00000363867 113 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 RNU6-60P-201ENST00000364792 103 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 SNORA25.8-201ENST00000364831 128 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 Y_RNA.393-201ENST00000383936 102 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 RNU6-1189P-201ENST00000383958 107 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 SNORA25-201ENST00000384384 134 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 RNU6-482P-201ENST00000391068 107 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 PCNPP3-201ENST00000393579 471 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 RNU6-394P-201ENST00000410735 107 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.1□□□□□ -2.23
NKX2-1P43699 SNORD111.1-201ENST00000516421 86 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 SNORA70.22-201ENST00000517160 124 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 AP003484.1-201ENST00000530974 250 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 AC015726.2-201ENST00000620112 122 ntBASIC1.1□□□□□ -2.23
NKX2-1P43699 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
NKX2-1P43699 SNORA25.7-201ENST00000364375 127 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 SNORA1-201ENST00000384107 130 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 Y_RNA.440-201ENST00000384120 114 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 Y_RNA.464-201ENST00000384282 110 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 RNU6-886P-201ENST00000384319 105 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
NKX2-1P43699 AL392103.1-201ENST00000447000 198 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 RPS29P29-201ENST00000456396 171 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 RNU7-73P-201ENST00000458743 63 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 snoU13.23-201ENST00000458863 104 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 snoU13.25-201ENST00000458945 104 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms