Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 PRELID3BP2-201ENST00000605362 201 ntBASIC1.06□□□□□ -2.24
SOX3P41225 RNU2-4P-201ENST00000606190 192 ntBASIC1.06□□□□□ -2.24
SOX3P41225 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.06□□□□□ -2.24
SOX3P41225 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SOX3P41225 MIR548O-201ENST00000408583 114 ntBASIC1.05□□□□□ -2.24
SOX3P41225 AL591704.2-201ENST00000421658 181 ntBASIC1.05□□□□□ -2.24
SOX3P41225 SNORA31.2-201ENST00000516019 134 ntBASIC1.05□□□□□ -2.24
SOX3P41225 RNU6-1299P-201ENST00000516316 100 ntBASIC1.05□□□□□ -2.24
SOX3P41225 RNU7-25P-201ENST00000516544 62 ntBASIC1.05□□□□□ -2.24
SOX3P41225 RNU6-365P-201ENST00000517113 106 ntBASIC1.05□□□□□ -2.24
SOX3P41225 AC090425.1-201ENST00000610007 140 ntBASIC1.05□□□□□ -2.24
SOX3P41225 AC108706.1-201ENST00000611053 297 ntBASIC1.05□□□□□ -2.24
SOX3P41225 AC015726.2-201ENST00000620112 122 ntBASIC1.05□□□□□ -2.24
SOX3P41225 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SOX3P41225 Y_RNA.66-201ENST00000362862 102 ntBASIC1.04□□□□□ -2.24
SOX3P41225 Y_RNA.83-201ENST00000363005 113 ntBASIC1.04□□□□□ -2.24
SOX3P41225 RNU6-103P-201ENST00000363686 107 ntBASIC1.04□□□□□ -2.24
SOX3P41225 Y_RNA.238-201ENST00000364441 102 ntBASIC1.04□□□□□ -2.24
SOX3P41225 Y_RNA.257-201ENST00000364596 102 ntBASIC1.04□□□□□ -2.24
SOX3P41225 RNU6-939P-201ENST00000384634 107 ntBASIC1.04□□□□□ -2.24
SOX3P41225 SNORD28B-201ENST00000390993 75 ntBASIC1.04□□□□□ -2.24
SOX3P41225 RNU7-41P-201ENST00000515917 61 ntBASIC1.04□□□□□ -2.24
SOX3P41225 SNORA31.4-201ENST00000516049 129 ntBASIC1.04□□□□□ -2.24
SOX3P41225 RNA5SP153-201ENST00000516498 76 ntBASIC1.04□□□□□ -2.24
SOX3P41225 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
SOX3P41225 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
SOX3P41225 SNORD45.3-201ENST00000363836 72 ntBASIC1.03□□□□□ -2.24
SOX3P41225 Y_RNA.297-201ENST00000364950 91 ntBASIC1.03□□□□□ -2.24
SOX3P41225 SNORA1.2-201ENST00000365189 134 ntBASIC1.03□□□□□ -2.24
SOX3P41225 SNORD24-201ENST00000383884 75 ntBASIC1.03□□□□□ -2.24
SOX3P41225 Y_RNA.412-201ENST00000384001 104 ntBASIC1.03□□□□□ -2.24
SOX3P41225 Y_RNA.494-201ENST00000384432 111 ntBASIC1.03□□□□□ -2.24
SOX3P41225 Y_RNA.571-201ENST00000384753 98 ntBASIC1.03□□□□□ -2.24
SOX3P41225 SNORA26-201ENST00000391286 122 ntBASIC1.03□□□□□ -2.24
SOX3P41225 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.03□□□□□ -2.24
SOX3P41225 RNU6-504P-201ENST00000516568 104 ntBASIC1.03□□□□□ -2.24
SOX3P41225 SNORA70.22-201ENST00000517160 124 ntBASIC1.03□□□□□ -2.24
SOX3P41225 RNU7-181P-201ENST00000517234 74 ntBASIC1.03□□□□□ -2.24
SOX3P41225 AP003716.2-201ENST00000528260 108 ntBASIC1.03□□□□□ -2.24
SOX3P41225 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
SOX3P41225 AL022345.2-201ENST00000606307 135 ntBASIC1.03□□□□□ -2.24
SOX3P41225 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.03□□□□□ -2.24
SOX3P41225 U6.106-201ENST00000636360 105 ntBASIC1.03□□□□□ -2.24
SOX3P41225 Y_RNA.23-201ENST00000362496 106 ntBASIC1.02□□□□□ -2.25
SOX3P41225 RNU6-200P-201ENST00000364743 107 ntBASIC1.02□□□□□ -2.25
SOX3P41225 Y_RNA.634-201ENST00000364811 113 ntBASIC1.02□□□□□ -2.25
SOX3P41225 RNU6-1318P-201ENST00000365389 103 ntBASIC1.02□□□□□ -2.25
SOX3P41225 Y_RNA.363-201ENST00000365529 113 ntBASIC1.02□□□□□ -2.25
SOX3P41225 Y_RNA.370-201ENST00000365589 108 ntBASIC1.02□□□□□ -2.25
SOX3P41225 Y_RNA.432-201ENST00000384087 111 ntBASIC1.02□□□□□ -2.25
SOX3P41225 SNORD61-201ENST00000384252 73 ntBASIC1.02□□□□□ -2.25
SOX3P41225 SNORA25-201ENST00000384384 134 ntBASIC1.02□□□□□ -2.25
SOX3P41225 RNU6-1067P-201ENST00000384752 107 ntBASIC1.02□□□□□ -2.25
SOX3P41225 RNU6-910P-201ENST00000390844 107 ntBASIC1.02□□□□□ -2.25
SOX3P41225 RNU6-578P-201ENST00000390980 103 ntBASIC1.02□□□□□ -2.25
SOX3P41225 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.02□□□□□ -2.25
SOX3P41225 RNU6-938P-201ENST00000411285 103 ntBASIC1.02□□□□□ -2.25
SOX3P41225 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
SOX3P41225 RNU2-13P-201ENST00000515909 113 ntBASIC1.02□□□□□ -2.25
SOX3P41225 RNU6-693P-201ENST00000516134 107 ntBASIC1.02□□□□□ -2.25
SOX3P41225 RNU6-1219P-201ENST00000516143 112 ntBASIC1.02□□□□□ -2.25
SOX3P41225 RNA5SP102-201ENST00000516865 106 ntBASIC1.02□□□□□ -2.25
SOX3P41225 AC109810.1-201ENST00000534066 224 ntBASIC1.02□□□□□ -2.25
SOX3P41225 AC097639.2-201ENST00000603159 172 ntBASIC1.02□□□□□ -2.25
SOX3P41225 AC008133.2-201ENST00000624540 351 ntBASIC1.02□□□□□ -2.25
SOX3P41225 MIR376A2-201ENST00000636782 80 ntBASIC1.02□□□□□ -2.25
SOX3P41225 Y_RNA.7-201ENST00000362352 102 ntBASIC1.01□□□□□ -2.25
SOX3P41225 RNU6-888P-201ENST00000363010 101 ntBASIC1.01□□□□□ -2.25
SOX3P41225 Y_RNA.537-201ENST00000384626 109 ntBASIC1.01□□□□□ -2.25
SOX3P41225 Y_RNA.552-201ENST00000384665 112 ntBASIC1.01□□□□□ -2.25
SOX3P41225 MIR518F-201ENST00000384973 87 ntBASIC1.01□□□□□ -2.25
SOX3P41225 RNU2-70P-201ENST00000410718 179 ntBASIC1.01□□□□□ -2.25
SOX3P41225 AC087499.4-201ENST00000448505 178 ntBASIC1.01□□□□□ -2.25
SOX3P41225 Y_RNA.644-201ENST00000459006 113 ntBASIC1.01□□□□□ -2.25
SOX3P41225 AC074198.2-201ENST00000508153 258 ntBASIC1.01□□□□□ -2.25
SOX3P41225 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.01□□□□□ -2.25
SOX3P41225 Y_RNA.674-201ENST00000516362 113 ntBASIC1.01□□□□□ -2.25
SOX3P41225 RNU7-40P-201ENST00000516397 64 ntBASIC1.01□□□□□ -2.25
SOX3P41225 MIR3671-201ENST00000580455 88 ntBASIC1.01□□□□□ -2.25
SOX3P41225 MIR4744-201ENST00000581563 82 ntBASIC1.01□□□□□ -2.25
SOX3P41225 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.01□□□□□ -2.25
SOX3P41225 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
SOX3P41225 RNA5SP264-201ENST00000363115 107 ntBASIC1□□□□□ -2.25
SOX3P41225 Y_RNA.121-201ENST00000363309 113 ntBASIC1□□□□□ -2.25
SOX3P41225 RNU6-682P-201ENST00000363843 106 ntBASIC1□□□□□ -2.25
SOX3P41225 SNORD115-28-201ENST00000363931 81 ntBASIC1□□□□□ -2.25
SOX3P41225 SNORA25.9-201ENST00000365087 128 ntBASIC1□□□□□ -2.25
SOX3P41225 RNU6-728P-201ENST00000365375 104 ntBASIC1□□□□□ -2.25
SOX3P41225 SNORA1-201ENST00000384107 130 ntBASIC1□□□□□ -2.25
SOX3P41225 SNORA80D-201ENST00000384488 135 ntBASIC1□□□□□ -2.25
SOX3P41225 MIR570-201ENST00000384917 97 ntBASIC1□□□□□ -2.25
SOX3P41225 MIR618-201ENST00000385287 98 ntBASIC1□□□□□ -2.25
SOX3P41225 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
SOX3P41225 MIR1276-201ENST00000408707 83 ntBASIC1□□□□□ -2.25
SOX3P41225 RNU4-43P-201ENST00000410628 137 ntBASIC1□□□□□ -2.25
SOX3P41225 RNU5E-9P-201ENST00000411164 104 ntBASIC1□□□□□ -2.25
SOX3P41225 RPS26P48-201ENST00000491713 339 ntBASIC1□□□□□ -2.25
SOX3P41225 SNORD79.1-201ENST00000516069 84 ntBASIC1□□□□□ -2.25
SOX3P41225 RNU6-1270P-201ENST00000517128 108 ntBASIC1□□□□□ -2.25
SOX3P41225 AC027335.2-201ENST00000624030 375 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms