Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AL049779.4-201ENST00000604500 156 ntBASIC2.41□□□□□ -2.02
GDNFP39905 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.41□□□□□ -2.02
GDNFP39905 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.41□□□□□ -2.02
GDNFP39905 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.4□□□□□ -2.02
GDNFP39905 MIR26A1-201ENST00000362205 77 ntBASIC2.4□□□□□ -2.03
GDNFP39905 SNORD115-2-201ENST00000362842 82 ntBASIC2.4□□□□□ -2.03
GDNFP39905 SNORD115-20-201ENST00000365099 82 ntBASIC2.4□□□□□ -2.03
GDNFP39905 SNORA1.2-201ENST00000365189 134 ntBASIC2.4□□□□□ -2.03
GDNFP39905 RNU1-138P-201ENST00000384093 164 ntBASIC2.4□□□□□ -2.03
GDNFP39905 AL034345.1-201ENST00000407768 123 ntBASIC2.4□□□□□ -2.03
GDNFP39905 SUMO1P4-201ENST00000429430 302 ntBASIC2.4□□□□□ -2.03
GDNFP39905 RNA5SP367-201ENST00000516557 118 ntBASIC2.4□□□□□ -2.03
GDNFP39905 RNU6-267P-201ENST00000516714 103 ntBASIC2.4□□□□□ -2.03
GDNFP39905 SNORA31.15-201ENST00000516771 132 ntBASIC2.4□□□□□ -2.03
GDNFP39905 MIR3152-201ENST00000579801 74 ntBASIC2.4□□□□□ -2.03
GDNFP39905 MIR4325-201ENST00000583049 90 ntBASIC2.4□□□□□ -2.03
GDNFP39905 AC025521.1-201ENST00000621624 286 ntBASIC2.4□□□□□ -2.03
GDNFP39905 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
GDNFP39905 SNORD115-35-201ENST00000365122 82 ntBASIC2.39□□□□□ -2.03
GDNFP39905 Y_RNA.377-201ENST00000365644 108 ntBASIC2.39□□□□□ -2.03
GDNFP39905 SNORA32-201ENST00000384072 121 ntBASIC2.39□□□□□ -2.03
GDNFP39905 RNU6-1190P-201ENST00000410811 104 ntBASIC2.39□□□□□ -2.03
GDNFP39905 AC092427.1-202ENST00000430569 476 ntBASIC2.39□□□□□ -2.03
GDNFP39905 AC093850.1-201ENST00000454121 251 ntBASIC2.39□□□□□ -2.03
GDNFP39905 RNU7-34P-201ENST00000459394 64 ntBASIC2.39□□□□□ -2.03
GDNFP39905 RNA5SP395-201ENST00000516567 118 ntBASIC2.39□□□□□ -2.03
GDNFP39905 Y_RNA.705-201ENST00000516862 110 ntBASIC2.39□□□□□ -2.03
GDNFP39905 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.39□□□□□ -2.03
GDNFP39905 MIR4791-201ENST00000607666 84 ntBASIC2.39□□□□□ -2.03
GDNFP39905 AC010297.1-201ENST00000623948 149 ntBASIC2.39□□□□□ -2.03
GDNFP39905 MIR6841-201ENST00000637129 72 ntBASIC2.39□□□□□ -2.03
GDNFP39905 AL512310.12-203ENST00000640543 90 ntBASIC2.39□□□□□ -2.03
GDNFP39905 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
GDNFP39905 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
GDNFP39905 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.38□□□□□ -2.03
GDNFP39905 RNU6-787P-201ENST00000384032 107 ntBASIC2.38□□□□□ -2.03
GDNFP39905 RNU6-675P-201ENST00000384236 104 ntBASIC2.38□□□□□ -2.03
GDNFP39905 SNORD116-22-201ENST00000384430 92 ntBASIC2.38□□□□□ -2.03
GDNFP39905 SNORA26.6-201ENST00000391256 115 ntBASIC2.38□□□□□ -2.03
GDNFP39905 RNU6-1018P-201ENST00000516577 106 ntBASIC2.38□□□□□ -2.03
GDNFP39905 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.38□□□□□ -2.03
GDNFP39905 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
GDNFP39905 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
GDNFP39905 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.37□□□□□ -2.03
GDNFP39905 AP000648.3-201ENST00000623539 4507 ntBASIC2.37□□□□□ -2.03
GDNFP39905 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.37□□□□□ -2.03
GDNFP39905 Y_RNA.96-201ENST00000363092 109 ntBASIC2.37□□□□□ -2.03
GDNFP39905 MIR597-201ENST00000384968 97 ntBASIC2.37□□□□□ -2.03
GDNFP39905 SNORA48.2-201ENST00000390926 124 ntBASIC2.37□□□□□ -2.03
GDNFP39905 NDUFB4P4-201ENST00000404822 243 ntBASIC2.37□□□□□ -2.03
GDNFP39905 RNU6-887P-201ENST00000410660 100 ntBASIC2.37□□□□□ -2.03
GDNFP39905 AC022018.1-201ENST00000430685 241 ntBASIC2.37□□□□□ -2.03
GDNFP39905 RPS29P29-201ENST00000456396 171 ntBASIC2.37□□□□□ -2.03
GDNFP39905 S100A11P2-201ENST00000467589 312 ntBASIC2.37□□□□□ -2.03
GDNFP39905 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.37□□□□□ -2.03
GDNFP39905 MIR5588-201ENST00000581890 63 ntBASIC2.37□□□□□ -2.03
GDNFP39905 MIR5194-201ENST00000582634 120 ntBASIC2.37□□□□□ -2.03
GDNFP39905 MIR6717-201ENST00000622747 73 ntBASIC2.37□□□□□ -2.03
GDNFP39905 MIR6073-201ENST00000352083 89 ntBASIC2.36□□□□□ -2.03
GDNFP39905 RNU1-91P-201ENST00000364746 163 ntBASIC2.36□□□□□ -2.03
GDNFP39905 SNORA70.7-201ENST00000384159 133 ntBASIC2.36□□□□□ -2.03
GDNFP39905 RNU6-813P-201ENST00000384691 107 ntBASIC2.36□□□□□ -2.03
GDNFP39905 MIR128-1-201ENST00000384921 82 ntBASIC2.36□□□□□ -2.03
GDNFP39905 MIR136-201ENST00000385207 82 ntBASIC2.36□□□□□ -2.03
GDNFP39905 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
GDNFP39905 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
GDNFP39905 AL139132.1-201ENST00000431587 344 ntBASIC2.36□□□□□ -2.03
GDNFP39905 AC104389.3-201ENST00000445629 235 ntBASIC2.36□□□□□ -2.03
GDNFP39905 RNU7-53P-201ENST00000516705 60 ntBASIC2.36□□□□□ -2.03
GDNFP39905 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.36□□□□□ -2.03
GDNFP39905 MIR4446-201ENST00000578505 67 ntBASIC2.36□□□□□ -2.03
GDNFP39905 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
GDNFP39905 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
GDNFP39905 RNU6-1313P-201ENST00000362622 102 ntBASIC2.35□□□□□ -2.03
GDNFP39905 RNU6-1125P-201ENST00000363601 107 ntBASIC2.35□□□□□ -2.03
GDNFP39905 RNU6-979P-201ENST00000383896 107 ntBASIC2.35□□□□□ -2.03
GDNFP39905 SNORA44-201ENST00000384584 132 ntBASIC2.35□□□□□ -2.03
GDNFP39905 RNU6-1031P-201ENST00000384773 107 ntBASIC2.35□□□□□ -2.03
GDNFP39905 MIR452-201ENST00000385020 85 ntBASIC2.35□□□□□ -2.03
GDNFP39905 MIR29C-201ENST00000385231 88 ntBASIC2.35□□□□□ -2.03
GDNFP39905 RNU6-913P-201ENST00000390913 95 ntBASIC2.35□□□□□ -2.03
GDNFP39905 SNORD28B-201ENST00000390993 75 ntBASIC2.35□□□□□ -2.03
GDNFP39905 RNU11-3P-201ENST00000391111 133 ntBASIC2.35□□□□□ -2.03
GDNFP39905 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.35□□□□□ -2.03
GDNFP39905 MIR548AR-201ENST00000582191 57 ntBASIC2.35□□□□□ -2.03
GDNFP39905 AC096720.1-201ENST00000604441 183 ntBASIC2.35□□□□□ -2.03
GDNFP39905 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
GDNFP39905 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
GDNFP39905 RNA5SP393-201ENST00000363423 117 ntBASIC2.34□□□□□ -2.03
GDNFP39905 Y_RNA.244-201ENST00000364484 109 ntBASIC2.34□□□□□ -2.03
GDNFP39905 SNORA1.1-201ENST00000364671 133 ntBASIC2.34□□□□□ -2.03
GDNFP39905 RNU6-219P-201ENST00000364728 107 ntBASIC2.34□□□□□ -2.03
GDNFP39905 EEF1A1P41-201ENST00000414667 207 ntBASIC2.34□□□□□ -2.03
GDNFP39905 AC108729.3-201ENST00000513484 108 ntBASIC2.34□□□□□ -2.03
GDNFP39905 DNAJC19P9-201ENST00000555084 351 ntBASIC2.34□□□□□ -2.03
GDNFP39905 AL020996.3-201ENST00000606617 222 ntBASIC2.34□□□□□ -2.03
GDNFP39905 AC243994.1-201ENST00000618627 109 ntBASIC2.34□□□□□ -2.03
GDNFP39905 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.34□□□□□ -2.03
GDNFP39905 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
GDNFP39905 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms