Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RNU6-759P-201ENST00000516740 103 ntBASIC-1.29□□□□□ -2.62
CKS2P33552 RNU6-256P-201ENST00000516747 97 ntBASIC-1.29□□□□□ -2.62
CKS2P33552 AC005014.2-201ENST00000607795 599 ntBASIC-1.29□□□□□ -2.62
CKS2P33552 AC122108.2-201ENST00000611946 526 ntBASIC-1.29□□□□□ -2.62
CKS2P33552 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.29□□□□□ -2.62
CKS2P33552 AC022140.2-201ENST00000623500 188 ntBASIC-1.29□□□□□ -2.62
CKS2P33552 AC079248.2-201ENST00000623779 326 ntBASIC-1.29□□□□□ -2.62
CKS2P33552 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 RNU4-58P-201ENST00000363192 141 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 RNU4-36P-201ENST00000364294 144 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 AL445193.1-201ENST00000441183 141 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 FCF1P4-201ENST00000448326 183 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 MTND1P27-201ENST00000451117 902 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 RNU6-835P-201ENST00000516974 104 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 RNU6-232P-201ENST00000517144 64 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 DEFB131E-201ENST00000532329 154 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.3□□□□□ -2.62
CKS2P33552 AL080274.1-201ENST00000605565 220 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 AC027449.1-201ENST00000608890 407 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 AC091931.1-201ENST00000623488 728 ntBASIC-1.3□□□□□ -2.62
CKS2P33552 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.31□□□□□ -2.62
CKS2P33552 AC098826.2-201ENST00000452011 651 ntBASIC-1.31□□□□□ -2.62
CKS2P33552 RNU7-125P-201ENST00000458760 62 ntBASIC-1.31□□□□□ -2.62
CKS2P33552 RNU6-470P-201ENST00000515954 104 ntBASIC-1.31□□□□□ -2.62
CKS2P33552 RNU6-175P-201ENST00000516896 107 ntBASIC-1.31□□□□□ -2.62
CKS2P33552 MIR4636-201ENST00000582271 80 ntBASIC-1.31□□□□□ -2.62
CKS2P33552 AC024933.1-201ENST00000608472 348 ntBASIC-1.31□□□□□ -2.62
CKS2P33552 MIR6779-201ENST00000617283 64 ntBASIC-1.31□□□□□ -2.62
CKS2P33552 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.32□□□□□ -2.62
CKS2P33552 SNORD56B-201ENST00000384713 71 ntBASIC-1.32□□□□□ -2.62
CKS2P33552 MIR548A2-201ENST00000384956 97 ntBASIC-1.32□□□□□ -2.62
CKS2P33552 MIR181B2-201ENST00000385004 89 ntBASIC-1.32□□□□□ -2.62
CKS2P33552 SNORA36B-201ENST00000410438 131 ntBASIC-1.32□□□□□ -2.62
CKS2P33552 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.32□□□□□ -2.62
CKS2P33552 RNU7-149P-201ENST00000516739 59 ntBASIC-1.32□□□□□ -2.62
CKS2P33552 RNU2-31P-201ENST00000516954 155 ntBASIC-1.32□□□□□ -2.62
CKS2P33552 AC022441.3-201ENST00000605737 136 ntBASIC-1.32□□□□□ -2.62
CKS2P33552 AC107308.1-201ENST00000615897 301 ntBASIC-1.32□□□□□ -2.62
CKS2P33552 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 RNY1P13-201ENST00000365030 105 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 SNORD116-11-201ENST00000383882 92 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 MIR626-201ENST00000385032 94 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 RNU4-63P-201ENST00000411313 118 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 AC091951.2-201ENST00000500762 203 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 AC074198.2-201ENST00000508153 258 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.33□□□□□ -2.62
CKS2P33552 MTATP6P24-201ENST00000576835 677 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 MIR3915-201ENST00000578518 97 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 MIR4473-201ENST00000583731 91 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 AC040904.1-201ENST00000590850 223 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 AC108676.2-201ENST00000605225 163 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 AC087752.4-201ENST00000605911 462 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 AC022960.3-201ENST00000619794 441 ntBASIC-1.33□□□□□ -2.62
CKS2P33552 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.34□□□□□ -2.62
CKS2P33552 SNORD83B-201ENST00000386745 93 ntBASIC-1.34□□□□□ -2.62
CKS2P33552 MT-TH-201ENST00000387441 69 ntBASIC-1.34□□□□□ -2.62
CKS2P33552 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.34□□□□□ -2.62
CKS2P33552 AL603914.1-201ENST00000401964 204 ntBASIC-1.34□□□□□ -2.62
CKS2P33552 RNA5SP261-201ENST00000410536 106 ntBASIC-1.34□□□□□ -2.62
CKS2P33552 MIR4280-201ENST00000582178 76 ntBASIC-1.34□□□□□ -2.62
CKS2P33552 RNU6-20P-201ENST00000384106 107 ntBASIC-1.35□□□□□ -2.63
CKS2P33552 SNORA27.4-201ENST00000516650 95 ntBASIC-1.35□□□□□ -2.63
CKS2P33552 MIR6851-201ENST00000617060 67 ntBASIC-1.35□□□□□ -2.63
CKS2P33552 RNA5SP133-201ENST00000363368 119 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 MIR539-201ENST00000365690 78 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 MIR620-201ENST00000385232 95 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 SNORA26.8-201ENST00000391306 124 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 MTND2P9-201ENST00000422293 931 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 RNU6-758P-201ENST00000516292 89 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 MIR2355-201ENST00000517199 87 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 AC005357.1-201ENST00000588399 301 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 uc_338.10-201ENST00000621872 182 ntBASIC-1.36□□□□□ -2.63
CKS2P33552 RNU6-626P-201ENST00000363354 107 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 SNORD114-29-201ENST00000364819 70 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 MIR625-201ENST00000385047 85 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 SNORA13-201ENST00000458790 133 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 SNORD5.1-201ENST00000458800 75 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.37□□□□□ -2.63
CKS2P33552 RNU6-693P-201ENST00000516134 107 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 SNORD38.3-201ENST00000516599 73 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.37□□□□□ -2.63
CKS2P33552 MIR4528-201ENST00000577763 90 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 RNU6-86P-201ENST00000606534 107 ntBASIC-1.37□□□□□ -2.63
CKS2P33552 MIR342-201ENST00000362212 99 ntBASIC-1.38□□□□□ -2.63
CKS2P33552 RNU1-141P-201ENST00000364623 158 ntBASIC-1.38□□□□□ -2.63
CKS2P33552 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.38□□□□□ -2.63
CKS2P33552 RNU6-900P-201ENST00000384498 102 ntBASIC-1.38□□□□□ -2.63
CKS2P33552 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.38□□□□□ -2.63
CKS2P33552 RNU7-141P-201ENST00000459304 62 ntBASIC-1.38□□□□□ -2.63
CKS2P33552 SNORD11.1-201ENST00000459482 85 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms